Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c16100

Experiment: m.b. Choline Lysine 3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Choline Lysine 3 mM
1,669,088	-				+0.2
1,669,113	+				-0.3
1,669,128	+				-0.3
1,669,130	+				+0.9
1,669,130	+				-0.0
1,669,130	+				-1.4
1,669,169	-				-2.5
1,669,282	-		PGA1_c16090	0.22	-0.7
1,669,310	-		PGA1_c16090	0.25	+0.0
1,669,380	-		PGA1_c16090	0.33	+0.0
1,669,402	-		PGA1_c16090	0.36	+1.3
1,669,412	-		PGA1_c16090	0.37	+1.0
1,669,453	-		PGA1_c16090	0.42	+1.1
1,669,496	-		PGA1_c16090	0.47	-0.8
1,669,517	-		PGA1_c16090	0.49	+1.1
1,669,547	-		PGA1_c16090	0.53	+1.4
1,669,580	+		PGA1_c16090	0.57	+1.5
1,669,661	-		PGA1_c16090	0.66	+2.0
1,669,719	+		PGA1_c16090	0.73	-0.6
1,669,802	-		PGA1_c16090	0.82	-0.6
1,669,812	-		PGA1_c16090	0.83	-0.3
1,670,091	+				+1.2
1,670,118	-				+0.6
1,670,240	-		PGA1_c16100	0.12	-1.0
1,670,272	+		PGA1_c16100	0.14	-0.0
1,670,272	+		PGA1_c16100	0.14	-0.1
1,670,280	-		PGA1_c16100	0.15	+0.1
1,670,280	-		PGA1_c16100	0.15	+0.0
1,670,280	-		PGA1_c16100	0.15	-1.6
1,670,280	-		PGA1_c16100	0.15	+2.9
1,670,305	+		PGA1_c16100	0.17	+1.0
1,670,305	+		PGA1_c16100	0.17	+2.1
1,670,313	-		PGA1_c16100	0.17	+0.0
1,670,322	+		PGA1_c16100	0.18	+0.3
1,670,411	-		PGA1_c16100	0.24	+0.6
1,670,462	-		PGA1_c16100	0.28	+2.9
1,670,473	-		PGA1_c16100	0.28	-0.2
1,670,496	-		PGA1_c16100	0.30	+1.5
1,670,546	-		PGA1_c16100	0.34	+0.6
1,670,595	+		PGA1_c16100	0.37	-1.7
1,670,595	+		PGA1_c16100	0.37	+0.9
1,670,609	+		PGA1_c16100	0.38	+0.4
1,670,626	+		PGA1_c16100	0.39	+1.3
1,670,662	-		PGA1_c16100	0.42	+0.6
1,670,673	+		PGA1_c16100	0.43	+1.2
1,670,776	-		PGA1_c16100	0.50	-0.6
1,670,781	-		PGA1_c16100	0.50	+1.7
1,670,818	+		PGA1_c16100	0.53	+0.7
1,670,932	+		PGA1_c16100	0.61	+1.7
1,670,947	-		PGA1_c16100	0.62	+2.7
1,670,987	+		PGA1_c16100	0.65	+0.0
1,671,031	+		PGA1_c16100	0.68	+0.4
1,671,111	+		PGA1_c16100	0.73	+0.4
1,671,111	+		PGA1_c16100	0.73	+0.4
1,671,141	+		PGA1_c16100	0.76	-1.1
1,671,149	-		PGA1_c16100	0.76	-0.3
1,671,156	+		PGA1_c16100	0.77	-2.5
1,671,163	-		PGA1_c16100	0.77	-1.6
1,671,209	+		PGA1_c16100	0.80	-0.5
1,671,259	+		PGA1_c16100	0.84	+0.4
1,671,327	+		PGA1_c16100	0.89	+1.6
1,671,335	-		PGA1_c16100	0.89	+0.3
1,671,386	+				-0.6
1,671,393	-				-0.9
1,671,393	-				-0.2
1,671,426	-				+0.9
1,671,463	-				+0.7
1,671,640	+		PGA1_c16110	0.30	-0.1
1,671,643	-		PGA1_c16110	0.31	+0.5
1,671,669	-		PGA1_c16110	0.36	+2.9
1,671,677	-		PGA1_c16110	0.38	-1.1
1,671,844	+		PGA1_c16110	0.75	+1.4
1,671,845	-		PGA1_c16110	0.76	-0.6
1,671,915	+				+0.1
1,671,956	-				-1.5
1,671,999	+				+2.4
1,672,004	+				-1.7
1,672,081	-				+1.6
1,672,107	+		PGA1_c16120	0.15	+0.5
1,672,115	-		PGA1_c16120	0.17	+1.7
1,672,255	-		PGA1_c16120	0.54	+0.4
1,672,256	-		PGA1_c16120	0.54	+0.7
1,672,278	-		PGA1_c16120	0.60	-0.5
1,672,304	-		PGA1_c16120	0.66	+0.2
1,672,474	-				+1.9
1,672,476	+				-0.4