Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c12300

Experiment: m.b. Choline Lysine 3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Choline Lysine 3 mM
1,275,603	-				-0.1
1,275,692	+		PGA1_c12290	0.10	-0.7
1,275,781	+		PGA1_c12290	0.20	+0.2
1,275,894	+		PGA1_c12290	0.33	+0.2
1,276,012	-		PGA1_c12290	0.47	-1.7
1,276,062	-		PGA1_c12290	0.53	+0.5
1,276,203	-		PGA1_c12290	0.69	+0.3
1,276,260	+		PGA1_c12290	0.76	-0.7
1,276,440	+				+0.0
1,276,440	+				-0.7
1,276,448	-				+0.4
1,276,448	-				+0.5
1,276,724	-				+1.1
1,276,761	-				-0.9
1,276,795	+		PGA1_c12300	0.12	+1.9
1,276,795	+		PGA1_c12300	0.12	+1.2
1,276,859	-		PGA1_c12300	0.15	+0.3
1,276,922	-		PGA1_c12300	0.18	-0.3
1,276,922	-		PGA1_c12300	0.18	+0.6
1,276,953	-		PGA1_c12300	0.20	+0.5
1,277,007	+		PGA1_c12300	0.23	+0.8
1,277,007	+		PGA1_c12300	0.23	+1.5
1,277,099	+		PGA1_c12300	0.28	-0.3
1,277,142	+		PGA1_c12300	0.30	+1.3
1,277,160	-		PGA1_c12300	0.31	+0.4
1,277,185	+		PGA1_c12300	0.32	+1.3
1,277,193	-		PGA1_c12300	0.32	+0.7
1,277,193	-		PGA1_c12300	0.32	+1.1
1,277,210	+		PGA1_c12300	0.33	+0.5
1,277,309	-		PGA1_c12300	0.39	+1.9
1,277,466	-		PGA1_c12300	0.47	-0.4
1,277,527	+		PGA1_c12300	0.50	+0.6
1,277,527	+		PGA1_c12300	0.50	+1.5
1,277,636	-		PGA1_c12300	0.56	+1.0
1,277,636	-		PGA1_c12300	0.56	+0.9
1,277,644	-		PGA1_c12300	0.56	-0.1
1,277,694	+		PGA1_c12300	0.59	+0.5
1,277,694	+		PGA1_c12300	0.59	-0.2
1,277,995	+		PGA1_c12300	0.74	+0.9
1,278,003	-		PGA1_c12300	0.75	-0.1
1,278,003	-		PGA1_c12300	0.75	+0.9
1,278,003	-		PGA1_c12300	0.75	+0.5
1,278,003	-		PGA1_c12300	0.75	+0.2
1,278,046	+		PGA1_c12300	0.77	-1.7
1,278,046	+		PGA1_c12300	0.77	+0.9
1,278,066	-		PGA1_c12300	0.78	+1.2
1,278,336	-				+0.5
1,278,355	+				+0.9
1,278,395	+				+2.1
1,278,395	+				-0.0
1,278,400	+				+2.2
1,278,443	+				+0.1
1,278,453	+				+0.7
1,278,504	+				-1.1
1,278,604	-				+0.5
1,278,652	-		PGA1_c12310	0.11	+1.7
1,278,674	+		PGA1_c12310	0.13	+0.7
1,278,739	+		PGA1_c12310	0.17	-1.0
1,278,857	-		PGA1_c12310	0.25	+0.6
1,278,928	+		PGA1_c12310	0.29	-0.3
1,278,953	-		PGA1_c12310	0.31	+0.2
1,279,039	-		PGA1_c12310	0.37	+1.7
1,279,039	-		PGA1_c12310	0.37	-0.7
1,279,039	-		PGA1_c12310	0.37	-0.1
1,279,092	-		PGA1_c12310	0.40	+1.4
1,279,154	-		PGA1_c12310	0.44	+0.3
1,279,154	-		PGA1_c12310	0.44	-1.3
1,279,154	-		PGA1_c12310	0.44	-1.1
1,279,167	-		PGA1_c12310	0.45	+1.0
1,279,191	-		PGA1_c12310	0.47	+1.8
1,279,193	+		PGA1_c12310	0.47	+0.9
1,279,223	-		PGA1_c12310	0.49	+1.0
1,279,228	-		PGA1_c12310	0.49	+1.1
1,279,274	+		PGA1_c12310	0.52	+0.4
1,279,284	+		PGA1_c12310	0.53	+0.8
1,279,292	-		PGA1_c12310	0.53	-0.1
1,279,437	+		PGA1_c12310	0.63	+0.9
1,279,470	+		PGA1_c12310	0.65	+1.5
1,279,470	+		PGA1_c12310	0.65	+0.1
1,279,478	-		PGA1_c12310	0.65	+2.9
1,279,478	-		PGA1_c12310	0.65	+0.3
1,279,478	-		PGA1_c12310	0.65	+1.0
1,279,478	-		PGA1_c12310	0.65	+1.2