Strain Fitness in Shewanella oneidensis MR-1 around SO3267

Experiment: Minimal 10C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Minimal 10C
3,402,963	-		SO3266	0.19	+0.2
3,402,963	-		SO3266	0.19	+1.0
3,402,963	-		SO3266	0.19	-0.9
3,402,963	-		SO3266	0.19	-0.0
3,402,963	-		SO3266	0.19	+0.2
3,402,964	-				+0.6
3,402,964	-		SO3266	0.19	-2.0
3,402,964	-		SO3266	0.19	-0.5
3,402,964	-		SO3266	0.19	-0.5
3,402,977	-		SO3266	0.20	+0.1
3,402,977	-		SO3266	0.20	-1.0
3,402,992	+		SO3266	0.21	-1.1
3,402,997	+		SO3266	0.22	-0.0
3,402,997	+		SO3266	0.22	-0.1
3,402,997	+		SO3266	0.22	-0.7
3,403,000	-		SO3266	0.22	-1.0
3,403,004	+		SO3266	0.22	-0.9
3,403,004	+		SO3266	0.22	-0.4
3,403,004	+		SO3266	0.22	-1.5
3,403,005	+		SO3266	0.22	-0.4
3,403,005	+		SO3266	0.22	-2.2
3,403,005	-		SO3266	0.22	-0.4
3,403,005	-		SO3266	0.22	+0.3
3,403,005	-		SO3266	0.22	-1.2
3,403,005	-		SO3266	0.22	-1.1
3,403,005	-		SO3266	0.22	-1.1
3,403,012	-		SO3266	0.23	-0.1
3,403,012	-		SO3266	0.23	-0.7
3,403,012	-		SO3266	0.23	-1.1
3,403,012	-		SO3266	0.23	-0.7
3,403,031	+		SO3266	0.24	-0.7
3,403,101	+		SO3266	0.30	+0.2
3,403,101	+		SO3266	0.30	-0.6
3,403,101	+		SO3266	0.30	-0.1
3,403,101	+		SO3266	0.30	-0.8
3,403,101	+		SO3266	0.30	-0.3
3,403,101	+		SO3266	0.30	+0.1
3,403,101	+		SO3266	0.30	-0.7
3,403,101	+		SO3266	0.30	-0.2
3,403,108	+		SO3266	0.31	-1.4
3,403,109	-		SO3266	0.31	-0.9
3,403,109	-		SO3266	0.31	-0.1
3,403,109	-		SO3266	0.31	+0.1
3,403,109	-		SO3266	0.31	-0.2
3,403,109	-				+0.2
3,403,109	-		SO3266	0.31	-0.8
3,403,109	-		SO3266	0.31	-0.8
3,403,109	-		SO3266	0.31	-2.8
3,403,109	-		SO3266	0.31	-0.3
3,403,109	-		SO3266	0.31	+0.9
3,403,109	-		SO3266	0.31	+0.1
3,403,144	+		SO3266	0.34	-0.1
3,403,147	+		SO3266	0.34	-1.0
3,403,163	+		SO3266	0.35	-1.0
3,403,184	-		SO3266	0.37	-1.5
3,403,196	-		SO3266	0.38	-0.1
3,403,217	-		SO3266	0.40	-0.6
3,403,253	+		SO3266	0.43	-0.2
3,403,261	-		SO3266	0.43	-0.5
3,403,265	-		SO3266	0.44	-0.5
3,403,274	-		SO3266	0.45	+0.7
3,403,276	+		SO3266	0.45	-0.8
3,403,276	+		SO3266	0.45	-0.2
3,403,276	+		SO3266	0.45	+0.0
3,403,279	-		SO3266	0.45	-0.6
3,403,279	-		SO3266	0.45	-0.6
3,403,281	+		SO3266	0.45	-1.0
3,403,282	-		SO3266	0.45	+0.0
3,403,284	-		SO3266	0.45	-0.7
3,403,284	-		SO3266	0.45	-1.2
3,403,290	-		SO3266	0.46	+0.3
3,403,290	-		SO3266	0.46	-0.8
3,403,301	+		SO3266	0.47	-0.2
3,403,304	-		SO3266	0.47	-0.5
3,403,304	-		SO3266	0.47	-0.3
3,403,345	-		SO3266	0.50	-1.1
3,403,345	-		SO3266	0.50	+0.2
3,403,369	-		SO3266	0.52	-0.1
3,403,381	-		SO3266	0.53	+0.5
3,403,441	+		SO3266	0.58	+0.6
3,403,449	-		SO3266	0.59	-0.3
3,403,462	+		SO3266	0.60	-0.3
3,403,462	+		SO3266	0.60	+0.3
3,403,462	+		SO3266	0.60	-1.0
3,403,462	+		SO3266	0.60	-0.7
3,403,462	+		SO3266	0.60	-0.4
3,403,462	+		SO3266	0.60	-0.4
3,403,462	+		SO3266	0.60	+0.4
3,403,470	-		SO3266	0.61	-0.1
3,403,470	-		SO3266	0.61	-0.6
3,403,470	-		SO3266	0.61	-0.6
3,403,470	-		SO3266	0.61	+1.0
3,403,470	-		SO3266	0.61	-0.3
3,403,470	-		SO3266	0.61	-0.7
3,403,470	-		SO3266	0.61	-0.4
3,403,470	-		SO3266	0.61	-0.3
3,403,470	-		SO3266	0.61	-0.2
3,403,470	-		SO3266	0.61	-0.4
3,403,470	-		SO3266	0.61	-0.0
3,403,470	-		SO3266	0.61	-0.9
3,403,485	+		SO3266	0.62	-0.4
3,403,485	+		SO3266	0.62	-1.0
3,403,485	+		SO3266	0.62	-1.0
3,403,487	+		SO3266	0.62	-1.1
3,403,487	+		SO3266	0.62	-0.4
3,403,493	-		SO3266	0.63	-0.4
3,403,493	-		SO3266	0.63	-0.1
3,403,493	-		SO3266	0.63	-0.9
3,403,495	-		SO3266	0.63	+0.8
3,403,495	-		SO3266	0.63	-0.5
3,403,529	-		SO3266	0.66	-0.3
3,403,574	+		SO3266	0.69	-0.7
3,403,574	+		SO3266	0.69	-1.2
3,403,574	+		SO3266	0.69	-0.7
3,403,574	+		SO3266	0.69	-0.5
3,403,574	+		SO3266	0.69	-1.3
3,403,574	+		SO3266	0.69	-0.7
3,403,574	+		SO3266	0.69	-0.5
3,403,574	+		SO3266	0.69	-0.0
3,403,582	-		SO3266	0.70	-0.5
3,403,582	-		SO3266	0.70	-1.6
3,403,582	-		SO3266	0.70	-0.2
3,403,582	-		SO3266	0.70	-0.0
3,403,582	-		SO3266	0.70	-1.0
3,403,615	-		SO3266	0.73	-0.8
3,403,642	+		SO3266	0.75	-1.3
3,403,662	+		SO3266	0.77	-0.3
3,403,685	+		SO3266	0.79	+0.3
3,403,703	-		SO3266	0.80	+0.8
3,403,703	-		SO3266	0.80	-1.4
3,403,828	+				-0.0
3,403,871	-				-0.4
3,403,871	-				-0.4
3,403,948	+				-0.5
3,404,002	-				-0.4
3,404,182	+		SO3267	0.24	-0.0
3,404,190	-		SO3267	0.25	-0.2
3,404,242	+		SO3267	0.31	-1.6
3,404,269	-		SO3267	0.34	+0.0
3,404,283	-		SO3267	0.35	-0.9
3,404,461	-		SO3267	0.55	-0.6
3,404,486	+		SO3267	0.58	-2.0
3,404,493	+		SO3267	0.58	-1.6
3,404,510	+		SO3267	0.60	-2.6
3,404,510	+		SO3267	0.60	-1.6
3,404,510	+		SO3267	0.60	-0.9
3,404,510	+		SO3267	0.60	-1.2
3,404,510	+		SO3267	0.60	-1.1
3,404,515	+		SO3267	0.61	-1.9
3,404,518	-		SO3267	0.61	-1.7
3,404,524	+		SO3267	0.62	+0.5
3,404,532	-		SO3267	0.63	-1.4
3,404,532	-		SO3267	0.63	-0.3
3,404,584	-		SO3267	0.68	+0.7
3,404,619	+		SO3267	0.72	-1.8
3,404,637	+		SO3267	0.74	-0.9
3,404,718	+		SO3267	0.83	-1.5
3,404,767	-		SO3267	0.88	+0.2
3,404,787	-				-1.5
3,404,809	+				-1.5
3,404,817	+				-0.8
3,404,825	-				-1.0
3,404,893	-				+0.3
3,404,956	-				+0.5
3,405,060	+				-0.2
3,405,088	+				+0.2
3,405,089	+				-0.6
3,405,104	-				-0.9
3,405,106	+				-0.1
3,405,114	-				-0.9
3,405,114	-				+0.7
3,405,191	+				-0.6
3,405,191	+				-0.5
3,405,191	+				+0.4
3,405,191	+				-0.5
3,405,193	+				-0.2
3,405,193	+				-0.3
3,405,193	+				-1.5
3,405,194	-				-0.5
3,405,199	-				-0.4
3,405,199	-				-0.4
3,405,199	-				-0.4
3,405,199	-				+0.4
3,405,199	-				-0.7
3,405,199	-				-0.9
3,405,199	-				-1.3
3,405,201	-				+0.1
3,405,201	-				-0.4
3,405,201	-				-0.4
3,405,239	+				-0.0
3,405,239	+				-0.9
3,405,239	+				-1.5
3,405,239	+				-0.6
3,405,239	+				-0.6
3,405,247	-				-0.5
3,405,247	-				+0.4
3,405,247	-				-0.3
3,405,247	-				-1.0
3,405,254	-				+0.4
3,405,265	-				-1.5
3,405,287	-		SO3268	0.11	-1.1
3,405,387	+		SO3268	0.16	-0.4
3,405,388	+		SO3268	0.16	-0.2
3,405,396	-		SO3268	0.16	-2.3
3,405,396	-		SO3268	0.16	-0.1
3,405,396	-		SO3268	0.16	-0.6
3,405,534	-		SO3268	0.24	+0.3
3,405,566	+		SO3268	0.25	-0.2
3,405,566	+		SO3268	0.25	-1.2
3,405,566	+		SO3268	0.25	-0.7
3,405,566	+		SO3268	0.25	-0.3
3,405,566	+		SO3268	0.25	-0.2
3,405,566	+		SO3268	0.25	-1.1
3,405,566	+		SO3268	0.25	-1.0
3,405,574	-		SO3268	0.26	-1.3
3,405,574	-		SO3268	0.26	+0.3
3,405,574	-		SO3268	0.26	+0.4
3,405,574	-		SO3268	0.26	-0.8
3,405,574	-		SO3268	0.26	-0.3
3,405,600	-		SO3268	0.27	+0.1
3,405,649	+		SO3268	0.30	+0.3
3,405,748	-		SO3268	0.35	-1.3
3,405,748	-		SO3268	0.35	-0.5
3,405,763	+		SO3268	0.36	+0.6
3,405,870	-		SO3268	0.41	-0.6