Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS11250

Experiment: biofilm; Day2; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM; Aluminum chloride 1mM
2,495,685	+				-2.6
2,495,685	+				-0.4
2,495,685	+				-0.9
2,495,685	+				-0.0
2,495,685	+				+0.4
2,495,685	+				-0.7
2,495,685	+				-2.1
2,495,685	+				-1.6
2,495,686	-				+0.7
2,495,686	-				-0.6
2,495,686	-				+0.6
2,495,686	-				-0.1
2,495,686	-				+0.9
2,495,686	-				-2.6
2,495,686	-				-0.9
2,495,686	-				+0.2
2,495,686	-				-2.3
2,495,686	-				+0.3
2,495,739	+				-1.6
2,495,739	+				-2.2
2,495,739	+				+0.3
2,495,739	+				+0.9
2,495,740	-		LRK54_RS11245	0.10	-0.8
2,495,740	-		LRK54_RS11245	0.10	+0.2
2,495,740	-		LRK54_RS11245	0.10	-1.3
2,495,740	-		LRK54_RS11245	0.10	+0.3
2,495,740	-		LRK54_RS11245	0.10	+0.9
2,495,740	-		LRK54_RS11245	0.10	+2.5
2,495,758	+		LRK54_RS11245	0.12	+0.7
2,495,801	+		LRK54_RS11245	0.17	+0.4
2,495,801	+		LRK54_RS11245	0.17	-0.4
2,495,801	+		LRK54_RS11245	0.17	-2.2
2,495,801	+		LRK54_RS11245	0.17	-0.9
2,495,801	+		LRK54_RS11245	0.17	+0.6
2,495,801	+		LRK54_RS11245	0.17	+0.1
2,495,801	+		LRK54_RS11245	0.17	+0.7
2,495,801	+		LRK54_RS11245	0.17	+0.2
2,495,801	+		LRK54_RS11245	0.17	+1.1
2,495,801	+		LRK54_RS11245	0.17	-0.1
2,495,801	+		LRK54_RS11245	0.17	-2.2
2,495,801	+		LRK54_RS11245	0.17	+0.7
2,495,801	+		LRK54_RS11245	0.17	+0.2
2,495,801	+		LRK54_RS11245	0.17	-0.5
2,495,801	+		LRK54_RS11245	0.17	-0.0
2,495,801	+		LRK54_RS11245	0.17	+0.7
2,495,801	+		LRK54_RS11245	0.17	-1.2
2,495,801	+		LRK54_RS11245	0.17	-2.5
2,495,801	+		LRK54_RS11245	0.17	+0.9
2,495,801	+		LRK54_RS11245	0.17	+0.5
2,495,801	+		LRK54_RS11245	0.17	-0.0
2,495,801	+		LRK54_RS11245	0.17	+0.1
2,495,801	+		LRK54_RS11245	0.17	+1.4
2,495,801	+		LRK54_RS11245	0.17	+1.5
2,495,801	+		LRK54_RS11245	0.17	+0.4
2,495,801	+		LRK54_RS11245	0.17	-0.4
2,495,801	+		LRK54_RS11245	0.17	-0.2
2,495,801	+		LRK54_RS11245	0.17	+2.3
2,495,801	+		LRK54_RS11245	0.17	-1.6
2,495,801	+		LRK54_RS11245	0.17	-1.1
2,495,801	+		LRK54_RS11245	0.17	+0.4
2,495,801	+		LRK54_RS11245	0.17	+0.0
2,495,801	+		LRK54_RS11245	0.17	-1.0
2,495,801	+		LRK54_RS11245	0.17	+1.4
2,495,801	+		LRK54_RS11245	0.17	-2.0
2,495,801	+		LRK54_RS11245	0.17	+0.0
2,495,801	+		LRK54_RS11245	0.17	-1.8
2,495,801	+		LRK54_RS11245	0.17	-0.0
2,495,801	+		LRK54_RS11245	0.17	-2.2
2,495,801	+		LRK54_RS11245	0.17	+0.7
2,495,802	-		LRK54_RS11245	0.17	+1.6
2,495,802	-		LRK54_RS11245	0.17	-3.6
2,495,802	-		LRK54_RS11245	0.17	-1.1
2,495,802	-		LRK54_RS11245	0.17	+0.9
2,495,802	-		LRK54_RS11245	0.17	-1.6
2,495,802	-		LRK54_RS11245	0.17	+0.7
2,495,802	-		LRK54_RS11245	0.17	-1.8
2,495,802	-		LRK54_RS11245	0.17	+1.0
2,495,802	-		LRK54_RS11245	0.17	-0.9
2,495,802	-		LRK54_RS11245	0.17	+0.2
2,495,802	-		LRK54_RS11245	0.17	-0.5
2,495,802	-		LRK54_RS11245	0.17	-1.8
2,495,802	-		LRK54_RS11245	0.17	-1.4
2,495,802	-		LRK54_RS11245	0.17	-2.4
2,495,802	-		LRK54_RS11245	0.17	-3.2
2,495,802	-		LRK54_RS11245	0.17	-1.2
2,495,802	-		LRK54_RS11245	0.17	-1.9
2,495,802	-		LRK54_RS11245	0.17	-0.2
2,495,802	-		LRK54_RS11245	0.17	+1.9
2,495,802	-		LRK54_RS11245	0.17	+0.4
2,495,802	-		LRK54_RS11245	0.17	+0.1
2,495,802	-		LRK54_RS11245	0.17	+1.1
2,495,802	-		LRK54_RS11245	0.17	+3.9
2,495,802	-		LRK54_RS11245	0.17	+0.5
2,495,802	-		LRK54_RS11245	0.17	-1.6
2,495,802	-		LRK54_RS11245	0.17	-0.4
2,495,802	-		LRK54_RS11245	0.17	-0.1
2,495,802	-		LRK54_RS11245	0.17	-1.7
2,495,802	-		LRK54_RS11245	0.17	-0.0
2,495,802	-		LRK54_RS11245	0.17	-0.8
2,495,802	-		LRK54_RS11245	0.17	-0.9
2,495,802	-		LRK54_RS11245	0.17	-1.1
2,495,802	-		LRK54_RS11245	0.17	+2.4
2,495,802	-		LRK54_RS11245	0.17	-1.2
2,495,802	-		LRK54_RS11245	0.17	-0.1
2,495,802	-		LRK54_RS11245	0.17	-1.7
2,495,802	-		LRK54_RS11245	0.17	+1.0
2,495,802	-		LRK54_RS11245	0.17	-1.7
2,495,802	-		LRK54_RS11245	0.17	+0.6
2,495,802	-		LRK54_RS11245	0.17	-0.3
2,495,802	-		LRK54_RS11245	0.17	-1.3
2,495,802	-		LRK54_RS11245	0.17	-1.2
2,495,802	-		LRK54_RS11245	0.17	-1.8
2,495,802	-		LRK54_RS11245	0.17	-1.6
2,495,802	-		LRK54_RS11245	0.17	-1.8
2,495,802	-		LRK54_RS11245	0.17	+0.7
2,495,802	-		LRK54_RS11245	0.17	+0.4
2,495,802	-		LRK54_RS11245	0.17	-1.5
2,495,804	-		LRK54_RS11245	0.18	-0.5
2,495,966	+		LRK54_RS11245	0.36	-0.0
2,495,966	+		LRK54_RS11245	0.36	-0.4
2,496,026	+		LRK54_RS11245	0.44	-0.0
2,496,026	+		LRK54_RS11245	0.44	+1.4
2,496,026	+		LRK54_RS11245	0.44	-1.5
2,496,026	+		LRK54_RS11245	0.44	+0.1
2,496,026	+		LRK54_RS11245	0.44	-0.5
2,496,026	+		LRK54_RS11245	0.44	-1.9
2,496,026	+		LRK54_RS11245	0.44	-0.4
2,496,026	+		LRK54_RS11245	0.44	-1.6
2,496,026	+		LRK54_RS11245	0.44	-0.3
2,496,026	+		LRK54_RS11245	0.44	-0.7
2,496,026	+		LRK54_RS11245	0.44	+2.3
2,496,026	+		LRK54_RS11245	0.44	+0.1
2,496,026	+		LRK54_RS11245	0.44	+0.3
2,496,026	+		LRK54_RS11245	0.44	-1.4
2,496,026	+		LRK54_RS11245	0.44	-2.1
2,496,026	+		LRK54_RS11245	0.44	+2.7
2,496,026	+		LRK54_RS11245	0.44	-2.0
2,496,026	+		LRK54_RS11245	0.44	-1.7
2,496,026	+		LRK54_RS11245	0.44	+0.4
2,496,026	+		LRK54_RS11245	0.44	+0.6
2,496,026	+		LRK54_RS11245	0.44	-1.6
2,496,026	+		LRK54_RS11245	0.44	-0.8
2,496,026	+		LRK54_RS11245	0.44	-2.3
2,496,026	+		LRK54_RS11245	0.44	-2.6
2,496,026	+		LRK54_RS11245	0.44	-0.2
2,496,026	+		LRK54_RS11245	0.44	+1.5
2,496,026	+		LRK54_RS11245	0.44	-3.0
2,496,026	+		LRK54_RS11245	0.44	-1.7
2,496,027	-		LRK54_RS11245	0.44	-0.3
2,496,027	-		LRK54_RS11245	0.44	+1.9
2,496,027	-		LRK54_RS11245	0.44	+0.4
2,496,027	-		LRK54_RS11245	0.44	-0.6
2,496,027	-		LRK54_RS11245	0.44	+0.6
2,496,027	-		LRK54_RS11245	0.44	-1.6
2,496,027	-		LRK54_RS11245	0.44	-1.7
2,496,027	-		LRK54_RS11245	0.44	-0.2
2,496,027	-		LRK54_RS11245	0.44	+0.6
2,496,027	-		LRK54_RS11245	0.44	+3.1
2,496,027	-		LRK54_RS11245	0.44	+3.4
2,496,027	-		LRK54_RS11245	0.44	-0.4
2,496,027	-		LRK54_RS11245	0.44	-2.3
2,496,027	-		LRK54_RS11245	0.44	-0.6
2,496,027	-		LRK54_RS11245	0.44	-0.4
2,496,027	-		LRK54_RS11245	0.44	-2.0
2,496,027	-		LRK54_RS11245	0.44	-0.3
2,496,027	-		LRK54_RS11245	0.44	+0.5
2,496,027	-		LRK54_RS11245	0.44	+0.3
2,496,027	-		LRK54_RS11245	0.44	-1.8
2,496,027	-		LRK54_RS11245	0.44	-2.1
2,496,027	-		LRK54_RS11245	0.44	+0.7
2,496,050	+		LRK54_RS11245	0.46	+1.6
2,496,051	-		LRK54_RS11245	0.46	-2.4
2,496,051	-		LRK54_RS11245	0.46	-0.3
2,496,078	+		LRK54_RS11245	0.50	-0.1
2,496,078	+		LRK54_RS11245	0.50	+1.2
2,496,079	-		LRK54_RS11245	0.50	-0.1
2,496,079	-		LRK54_RS11245	0.50	-0.3
2,496,079	-		LRK54_RS11245	0.50	-0.3
2,496,079	-		LRK54_RS11245	0.50	-3.3
2,496,092	+		LRK54_RS11245	0.51	-0.4
2,496,092	+		LRK54_RS11245	0.51	+0.5
2,496,092	+		LRK54_RS11245	0.51	+0.5
2,496,092	+		LRK54_RS11245	0.51	-1.2
2,496,092	+		LRK54_RS11245	0.51	+0.3
2,496,092	+		LRK54_RS11245	0.51	-0.6
2,496,092	+		LRK54_RS11245	0.51	-0.5
2,496,092	+		LRK54_RS11245	0.51	+0.4
2,496,092	+		LRK54_RS11245	0.51	+1.7
2,496,092	+		LRK54_RS11245	0.51	-1.2
2,496,093	-		LRK54_RS11245	0.51	-0.6
2,496,093	-		LRK54_RS11245	0.51	-0.9
2,496,093	-		LRK54_RS11245	0.51	+1.6
2,496,093	-		LRK54_RS11245	0.51	-2.7
2,496,093	-		LRK54_RS11245	0.51	-0.6
2,496,093	-		LRK54_RS11245	0.51	-1.4
2,496,093	-		LRK54_RS11245	0.51	+2.9
2,496,093	-		LRK54_RS11245	0.51	-0.1
2,496,093	-		LRK54_RS11245	0.51	+0.3
2,496,093	-		LRK54_RS11245	0.51	-2.9
2,496,093	-		LRK54_RS11245	0.51	+0.1
2,496,093	-		LRK54_RS11245	0.51	+1.3
2,496,093	-		LRK54_RS11245	0.51	-1.7
2,496,281	+		LRK54_RS11245	0.73	-0.8
2,496,282	-		LRK54_RS11245	0.73	+1.3
2,496,282	-		LRK54_RS11245	0.73	-3.0
2,496,308	+		LRK54_RS11245	0.76	-0.4
2,496,308	+		LRK54_RS11245	0.76	-0.2
2,496,308	+		LRK54_RS11245	0.76	-0.7
2,496,308	+		LRK54_RS11245	0.76	-2.5
2,496,308	+		LRK54_RS11245	0.76	+0.4
2,496,308	+		LRK54_RS11245	0.76	-1.3
2,496,308	+		LRK54_RS11245	0.76	-0.6
2,496,308	+		LRK54_RS11245	0.76	-0.3
2,496,308	+		LRK54_RS11245	0.76	+0.7
2,496,308	+		LRK54_RS11245	0.76	+0.0
2,496,308	+		LRK54_RS11245	0.76	+1.1
2,496,308	+		LRK54_RS11245	0.76	-1.5
2,496,308	+		LRK54_RS11245	0.76	-0.2
2,496,308	+		LRK54_RS11245	0.76	-1.8
2,496,308	+		LRK54_RS11245	0.76	-3.5
2,496,308	+		LRK54_RS11245	0.76	-0.3
2,496,308	+		LRK54_RS11245	0.76	-1.5
2,496,308	+		LRK54_RS11245	0.76	+2.7
2,496,308	+		LRK54_RS11245	0.76	-1.0
2,496,308	+		LRK54_RS11245	0.76	+1.5
2,496,308	+		LRK54_RS11245	0.76	+1.1
2,496,308	+		LRK54_RS11245	0.76	-0.5
2,496,308	+		LRK54_RS11245	0.76	+0.9
2,496,308	+		LRK54_RS11245	0.76	+0.6
2,496,309	-		LRK54_RS11245	0.77	-0.6
2,496,309	-		LRK54_RS11245	0.77	-1.3
2,496,309	-		LRK54_RS11245	0.77	-0.2
2,496,309	-		LRK54_RS11245	0.77	+2.8
2,496,309	-		LRK54_RS11245	0.77	-0.8
2,496,309	-		LRK54_RS11245	0.77	+0.6
2,496,309	-		LRK54_RS11245	0.77	+0.5
2,496,309	-		LRK54_RS11245	0.77	-1.8
2,496,309	-		LRK54_RS11245	0.77	-0.7
2,496,309	-		LRK54_RS11245	0.77	-1.1
2,496,309	-		LRK54_RS11245	0.77	-1.1
2,496,309	-		LRK54_RS11245	0.77	+0.9
2,496,309	-		LRK54_RS11245	0.77	-2.7
2,496,309	-		LRK54_RS11245	0.77	+0.9
2,496,309	-		LRK54_RS11245	0.77	+2.7
2,496,309	-		LRK54_RS11245	0.77	-2.4
2,496,309	-		LRK54_RS11245	0.77	+1.2
2,496,309	-		LRK54_RS11245	0.77	-0.5
2,496,309	-		LRK54_RS11245	0.77	-1.6
2,496,309	-		LRK54_RS11245	0.77	-0.5
2,496,309	-		LRK54_RS11245	0.77	+0.1
2,496,309	-		LRK54_RS11245	0.77	+1.1
2,496,309	-		LRK54_RS11245	0.77	-1.6
2,496,309	-		LRK54_RS11245	0.77	+1.1
2,496,309	-		LRK54_RS11245	0.77	-0.9
2,496,309	-		LRK54_RS11245	0.77	-1.5
2,496,347	+		LRK54_RS11245	0.81	+1.3
2,496,347	+		LRK54_RS11245	0.81	-2.1
2,496,347	+		LRK54_RS11245	0.81	+0.6
2,496,365	+		LRK54_RS11245	0.83	+0.5
2,496,365	+		LRK54_RS11245	0.83	-0.7
2,496,365	+		LRK54_RS11245	0.83	-1.3
2,496,365	+		LRK54_RS11245	0.83	+0.3
2,496,365	+		LRK54_RS11245	0.83	+1.2
2,496,365	+		LRK54_RS11245	0.83	-2.6
2,496,365	+		LRK54_RS11245	0.83	-0.6
2,496,365	+		LRK54_RS11245	0.83	-1.2
2,496,365	+		LRK54_RS11245	0.83	+0.9
2,496,365	+		LRK54_RS11245	0.83	+0.2
2,496,365	+		LRK54_RS11245	0.83	+0.1
2,496,365	+		LRK54_RS11245	0.83	-1.2
2,496,365	+		LRK54_RS11245	0.83	+0.9
2,496,365	+		LRK54_RS11245	0.83	-0.6
2,496,365	+		LRK54_RS11245	0.83	+0.6
2,496,365	+		LRK54_RS11245	0.83	+0.7
2,496,365	+		LRK54_RS11245	0.83	+1.0
2,496,365	+		LRK54_RS11245	0.83	-2.2
2,496,365	+		LRK54_RS11245	0.83	+0.4
2,496,365	+		LRK54_RS11245	0.83	-2.4
2,496,365	+		LRK54_RS11245	0.83	+1.1
2,496,365	+		LRK54_RS11245	0.83	-1.8
2,496,365	+		LRK54_RS11245	0.83	-0.1
2,496,365	+		LRK54_RS11245	0.83	-0.8
2,496,365	+		LRK54_RS11245	0.83	+0.6
2,496,365	+		LRK54_RS11245	0.83	+1.9
2,496,366	-		LRK54_RS11245	0.83	+1.1
2,496,366	-		LRK54_RS11245	0.83	+0.7
2,496,366	-		LRK54_RS11245	0.83	-1.7
2,496,366	-		LRK54_RS11245	0.83	-0.0
2,496,366	-		LRK54_RS11245	0.83	+0.2
2,496,366	-		LRK54_RS11245	0.83	-0.9
2,496,366	-		LRK54_RS11245	0.83	+0.9
2,496,366	-		LRK54_RS11245	0.83	-0.2
2,496,366	-		LRK54_RS11245	0.83	+3.0
2,496,366	-		LRK54_RS11245	0.83	-3.4
2,496,366	-		LRK54_RS11245	0.83	-1.4
2,496,366	-		LRK54_RS11245	0.83	-0.7
2,496,366	-		LRK54_RS11245	0.83	-1.2
2,496,366	-		LRK54_RS11245	0.83	-2.3
2,496,366	-		LRK54_RS11245	0.83	-2.2
2,496,366	-		LRK54_RS11245	0.83	-0.5
2,496,366	-		LRK54_RS11245	0.83	+0.1
2,496,366	-		LRK54_RS11245	0.83	+0.5
2,496,366	-		LRK54_RS11245	0.83	+1.2
2,496,366	-		LRK54_RS11245	0.83	-0.6
2,496,593	+				+0.4
2,496,594	-				-0.6
2,496,594	-				+1.7
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2,497,506	+				+1.1
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2,498,166	+		LRK54_RS11260	0.38	+1.9
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