Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS16605

Experiment: planktonic; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day2; NLDM;
3,646,601	+		LRK54_RS16600	0.58	-0.1
3,646,601	+		LRK54_RS16600	0.58	-1.5
3,646,601	+		LRK54_RS16600	0.58	-0.0
3,646,601	+		LRK54_RS16600	0.58	-0.4
3,646,602	-		LRK54_RS16600	0.58	-1.4
3,647,150	+		LRK54_RS16600	0.88	+3.3
3,647,150	+		LRK54_RS16600	0.88	-0.6
3,647,150	+		LRK54_RS16600	0.88	-1.8
3,647,150	+		LRK54_RS16600	0.88	-2.4
3,647,150	+		LRK54_RS16600	0.88	-2.0
3,647,150	+		LRK54_RS16600	0.88	+1.5
3,647,150	+		LRK54_RS16600	0.88	+0.3
3,647,150	+		LRK54_RS16600	0.88	-0.7
3,647,150	+		LRK54_RS16600	0.88	-2.3
3,647,151	-		LRK54_RS16600	0.88	-0.8
3,647,151	-		LRK54_RS16600	0.88	+0.3
3,647,151	-		LRK54_RS16600	0.88	-1.1
3,647,151	-		LRK54_RS16600	0.88	-0.1
3,647,151	-		LRK54_RS16600	0.88	-3.1
3,647,258	+				-0.5
3,647,258	+				-0.3
3,647,258	+				+1.1
3,647,258	+				+0.3
3,647,258	+				-0.3
3,647,258	+				-1.2
3,647,258	+				-0.7
3,647,259	-				-0.8
3,647,259	-				+0.8
3,647,259	-				+1.1
3,647,259	-				+0.3
3,647,259	-				-1.8
3,647,259	-				-0.4
3,647,259	-				-0.8
3,647,259	-				-0.4
3,647,259	-				+0.2
3,647,259	-				-1.3
3,647,259	-				-0.1
3,647,375	+				+1.1
3,647,375	+				+2.1
3,647,375	+				-1.1
3,647,375	+				-1.4
3,647,375	+				-0.2
3,647,375	+				+0.6
3,647,375	+				-1.3
3,647,375	+				+1.1
3,647,375	+				-2.0
3,647,375	+				+0.1
3,647,375	+				-1.3
3,647,375	+				-0.3
3,647,375	+				-1.8
3,647,375	+				-0.9
3,647,375	+				-0.0
3,647,375	+				+1.5
3,647,375	+				+0.3
3,647,375	+				+1.1
3,647,375	+				-1.3
3,647,376	-				-0.4
3,647,376	-				+0.1
3,647,376	-				-0.9
3,647,376	-				+0.0
3,647,376	-				-1.8
3,647,376	-				+0.3
3,647,376	-				+0.1
3,647,376	-				+0.3
3,647,376	-				+1.3
3,647,376	-				+1.5
3,647,376	-				+0.1
3,647,376	-				-0.6
3,647,376	-				+0.3
3,647,376	-				-0.6
3,647,376	-				-1.7
3,647,376	-				+0.1
3,647,376	-				+1.1
3,647,376	-				-0.6
3,647,376	-				+1.8
3,647,376	-				+1.1
3,647,376	-				+1.5
3,647,376	-				-1.3
3,647,376	-				-1.1
3,647,376	-				+0.3
3,647,376	-				+0.3
3,647,477	+				+0.8
3,647,477	+				-1.6