Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS10325

Experiment: planktonic; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day2; NLDM;
2,274,506	-		LRK54_RS10320	0.75	-2.6
2,274,506	-		LRK54_RS10320	0.75	-0.5
2,274,662	-		LRK54_RS10320	0.85	-2.1
2,274,662	-		LRK54_RS10320	0.85	-1.4
2,274,662	-		LRK54_RS10320	0.85	-1.3
2,274,875	+				-0.3
2,274,875	+				-2.1
2,274,875	+				-1.6
2,274,876	-				-2.5
2,275,534	+		LRK54_RS10325	0.26	-1.3
2,275,534	+		LRK54_RS10325	0.26	-2.0
2,275,534	+		LRK54_RS10325	0.26	-0.5
2,275,534	+		LRK54_RS10325	0.26	-1.9
2,275,534	+		LRK54_RS10325	0.26	-1.0
2,275,535	-		LRK54_RS10325	0.26	-2.3
2,275,644	+		LRK54_RS10325	0.36	-1.7
2,275,644	+		LRK54_RS10325	0.36	-2.0
2,275,645	-		LRK54_RS10325	0.36	+0.1
2,275,645	-		LRK54_RS10325	0.36	-0.0
2,275,645	-		LRK54_RS10325	0.36	-1.0
2,275,654	+		LRK54_RS10325	0.37	-1.2
2,275,726	+		LRK54_RS10325	0.44	+3.0
2,275,727	-		LRK54_RS10325	0.44	-2.1
2,275,873	+		LRK54_RS10325	0.57	+2.2
2,275,873	+		LRK54_RS10325	0.57	-2.3
2,275,873	+		LRK54_RS10325	0.57	-1.4
2,275,873	+		LRK54_RS10325	0.57	-0.7
2,275,873	+		LRK54_RS10325	0.57	-1.7
2,275,873	+		LRK54_RS10325	0.57	-2.2
2,275,873	+		LRK54_RS10325	0.57	+1.6
2,275,873	+		LRK54_RS10325	0.57	-1.3
2,275,874	-		LRK54_RS10325	0.57	-0.4
2,275,874	-		LRK54_RS10325	0.57	+0.2
2,275,874	-		LRK54_RS10325	0.57	-1.5
2,275,874	-		LRK54_RS10325	0.57	-0.4
2,275,874	-		LRK54_RS10325	0.57	-1.4
2,275,874	-		LRK54_RS10325	0.57	-0.1
2,275,924	+		LRK54_RS10325	0.62	-1.7
2,275,924	+		LRK54_RS10325	0.62	-0.4
2,275,925	-		LRK54_RS10325	0.62	-1.2
2,276,041	+		LRK54_RS10325	0.72	-2.1
2,276,041	+		LRK54_RS10325	0.72	-0.9
2,276,041	+		LRK54_RS10325	0.72	-0.9
2,276,042	-		LRK54_RS10325	0.72	-2.2
2,276,251	+				+0.6
2,276,251	+				-3.3
2,276,251	+				-1.1
2,276,252	-				+0.1
2,276,352	-				+1.1
2,276,352	-				+1.5
2,276,352	-				-0.1
2,276,352	-				+0.7
2,276,463	+		LRK54_RS10330	0.19	-0.7
2,276,463	+		LRK54_RS10330	0.19	+0.4
2,276,709	+		LRK54_RS10330	0.57	+1.1
2,276,709	+		LRK54_RS10330	0.57	-0.4
2,276,709	+		LRK54_RS10330	0.57	-1.2
2,276,710	-		LRK54_RS10330	0.57	-0.3
2,277,125	+				-1.4
2,277,125	+				+0.3
2,277,233	+				+0.1
2,277,233	+				+0.2
2,277,233	+				+0.3
2,277,233	+				-0.7
2,277,234	-				+1.1