Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS11580

Experiment: biofilm; Day2; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM; Aluminum chloride 1mM
2,571,252	+		LRK54_RS11570	0.80	+3.9
2,571,252	+		LRK54_RS11570	0.80	-0.1
2,571,252	+		LRK54_RS11570	0.80	+1.1
2,571,323	+		LRK54_RS11570	0.89	+3.9
2,571,626	+		LRK54_RS11575	0.31	-3.0
2,571,626	+		LRK54_RS11575	0.31	-2.6
2,571,626	+		LRK54_RS11575	0.31	+0.8
2,571,626	+		LRK54_RS11575	0.31	-0.6
2,571,626	+		LRK54_RS11575	0.31	+0.9
2,571,626	+		LRK54_RS11575	0.31	-2.7
2,571,626	+		LRK54_RS11575	0.31	-2.8
2,571,626	+		LRK54_RS11575	0.31	+0.9
2,571,626	+		LRK54_RS11575	0.31	-1.2
2,571,626	+		LRK54_RS11575	0.31	-0.4
2,571,626	+		LRK54_RS11575	0.31	-0.7
2,571,626	+		LRK54_RS11575	0.31	-1.3
2,571,626	+		LRK54_RS11575	0.31	-0.3
2,571,626	+		LRK54_RS11575	0.31	+0.2
2,571,626	+		LRK54_RS11575	0.31	+2.5
2,571,626	+		LRK54_RS11575	0.31	+3.5
2,571,626	+		LRK54_RS11575	0.31	-0.3
2,571,627	-		LRK54_RS11575	0.31	-1.0
2,571,627	-		LRK54_RS11575	0.31	-2.2
2,571,627	-		LRK54_RS11575	0.31	-0.5
2,571,627	-		LRK54_RS11575	0.31	-1.3
2,571,627	-		LRK54_RS11575	0.31	-1.1
2,571,627	-		LRK54_RS11575	0.31	+0.5
2,571,627	-		LRK54_RS11575	0.31	+2.9
2,571,627	-		LRK54_RS11575	0.31	-2.8
2,571,627	-		LRK54_RS11575	0.31	-0.9
2,571,627	-		LRK54_RS11575	0.31	-1.1
2,571,627	-		LRK54_RS11575	0.31	-0.4
2,571,627	-		LRK54_RS11575	0.31	-0.5
2,571,627	-		LRK54_RS11575	0.31	+0.8
2,571,672	-		LRK54_RS11575	0.37	-1.4
2,571,672	-		LRK54_RS11575	0.37	-0.9
2,571,986	+		LRK54_RS11575	0.83	+0.5
2,571,986	+		LRK54_RS11575	0.83	-0.2
2,571,987	-		LRK54_RS11575	0.83	-0.9
2,571,987	-		LRK54_RS11575	0.83	-0.1
2,571,987	-		LRK54_RS11575	0.83	+1.9
2,571,987	-		LRK54_RS11575	0.83	+0.7
2,571,987	-		LRK54_RS11575	0.83	-0.9
2,571,987	-		LRK54_RS11575	0.83	-1.4
2,572,103	+				+0.5
2,572,103	+				+1.6
2,572,103	+				-0.3
2,572,103	+				-1.7
2,572,104	-				-0.4
2,572,104	-				-2.0
2,572,104	-				+1.1
2,572,104	-				+1.6
2,572,110	+				-2.2
2,572,110	+				+1.5
2,572,110	+				-1.7
2,572,110	+				-2.0
2,572,110	+				+1.1
2,572,111	-				+0.7
2,572,111	-				-1.3
2,572,111	-				-1.1
2,572,111	-				-2.5
2,572,111	-				-1.2
2,572,111	-				+0.9
2,572,111	-				+0.6
2,572,111	-				-1.1
2,572,463	+		LRK54_RS11580	0.48	-1.5
2,572,463	+		LRK54_RS11580	0.48	-2.8
2,572,530	+		LRK54_RS11580	0.57	-1.5
2,572,530	+		LRK54_RS11580	0.57	-1.0
2,572,530	+		LRK54_RS11580	0.57	-3.1
2,572,530	+		LRK54_RS11580	0.57	+0.9
2,572,530	+		LRK54_RS11580	0.57	-1.4
2,572,530	+		LRK54_RS11580	0.57	+1.1
2,572,531	-		LRK54_RS11580	0.57	+0.2
2,572,531	-		LRK54_RS11580	0.57	+0.3
2,572,531	-		LRK54_RS11580	0.57	+0.2
2,572,643	+		LRK54_RS11580	0.72	+0.4
2,572,643	+		LRK54_RS11580	0.72	-0.5
2,572,643	+		LRK54_RS11580	0.72	+0.8
2,572,643	+		LRK54_RS11580	0.72	-1.4
2,572,643	+		LRK54_RS11580	0.72	+1.4
2,572,643	+		LRK54_RS11580	0.72	-1.8
2,572,643	+		LRK54_RS11580	0.72	-1.0
2,572,643	+		LRK54_RS11580	0.72	-1.6
2,572,643	+		LRK54_RS11580	0.72	+1.7
2,572,643	+		LRK54_RS11580	0.72	-0.6
2,572,643	+		LRK54_RS11580	0.72	+0.5
2,572,643	+		LRK54_RS11580	0.72	-0.1
2,572,643	+		LRK54_RS11580	0.72	-1.0
2,572,643	+		LRK54_RS11580	0.72	-0.4
2,572,643	+		LRK54_RS11580	0.72	-1.4
2,572,643	+		LRK54_RS11580	0.72	+0.4
2,572,643	+		LRK54_RS11580	0.72	-0.5
2,572,643	+		LRK54_RS11580	0.72	-0.3
2,572,643	+		LRK54_RS11580	0.72	-0.1
2,572,643	+		LRK54_RS11580	0.72	+0.6
2,572,643	+		LRK54_RS11580	0.72	-2.8
2,572,644	-		LRK54_RS11580	0.72	+0.5
2,572,644	-		LRK54_RS11580	0.72	-1.4
2,572,644	-		LRK54_RS11580	0.72	-1.3
2,572,644	-		LRK54_RS11580	0.72	-1.9
2,572,644	-		LRK54_RS11580	0.72	-1.7
2,572,644	-		LRK54_RS11580	0.72	+0.2
2,572,644	-		LRK54_RS11580	0.72	+3.3
2,572,644	-		LRK54_RS11580	0.72	+2.2
2,572,644	-		LRK54_RS11580	0.72	-0.5
2,572,644	-		LRK54_RS11580	0.72	-0.4
2,572,644	-		LRK54_RS11580	0.72	-0.8
2,572,644	-		LRK54_RS11580	0.72	+1.9
2,572,644	-		LRK54_RS11580	0.72	-0.8
2,572,644	-		LRK54_RS11580	0.72	+0.0
2,572,644	-		LRK54_RS11580	0.72	-0.9
2,572,773	+		LRK54_RS11580	0.89	+0.4
2,572,773	+		LRK54_RS11580	0.89	+0.2
2,572,774	-		LRK54_RS11580	0.89	-1.6
2,572,774	-		LRK54_RS11580	0.89	-0.9
2,572,846	-				-0.4
2,572,902	-				+2.4
2,573,295	+		LRK54_RS11585	0.50	-0.2
2,573,295	+		LRK54_RS11585	0.50	+0.9
2,573,295	+		LRK54_RS11585	0.50	+0.6
2,573,295	+		LRK54_RS11585	0.50	-0.5
2,573,295	+		LRK54_RS11585	0.50	+0.6
2,573,295	+		LRK54_RS11585	0.50	+0.2
2,573,295	+		LRK54_RS11585	0.50	+0.5
2,573,295	+		LRK54_RS11585	0.50	-0.4
2,573,295	+		LRK54_RS11585	0.50	+0.4
2,573,295	+		LRK54_RS11585	0.50	+4.9
2,573,295	+		LRK54_RS11585	0.50	+0.2
2,573,296	-		LRK54_RS11585	0.50	+0.1
2,573,296	-		LRK54_RS11585	0.50	+0.0
2,573,296	-		LRK54_RS11585	0.50	-0.8
2,573,296	-		LRK54_RS11585	0.50	+0.9
2,573,296	-		LRK54_RS11585	0.50	+0.0
2,573,296	-		LRK54_RS11585	0.50	+3.9
2,573,296	-		LRK54_RS11585	0.50	+0.8
2,573,296	-		LRK54_RS11585	0.50	+1.4
2,573,296	-		LRK54_RS11585	0.50	+0.7
2,573,296	-		LRK54_RS11585	0.50	+1.4
2,573,296	-		LRK54_RS11585	0.50	+0.7
2,573,403	+		LRK54_RS11585	0.65	-1.0
2,573,403	+		LRK54_RS11585	0.65	-0.3
2,573,403	+		LRK54_RS11585	0.65	+1.0
2,573,403	+		LRK54_RS11585	0.65	+0.5
2,573,403	+		LRK54_RS11585	0.65	-0.0
2,573,403	+		LRK54_RS11585	0.65	-0.7
2,573,403	+		LRK54_RS11585	0.65	-2.3
2,573,403	+		LRK54_RS11585	0.65	-1.0
2,573,403	+		LRK54_RS11585	0.65	-1.0
2,573,403	+		LRK54_RS11585	0.65	-0.1
2,573,403	+		LRK54_RS11585	0.65	-1.7
2,573,403	+		LRK54_RS11585	0.65	+0.1
2,573,403	+		LRK54_RS11585	0.65	+0.7
2,573,403	+		LRK54_RS11585	0.65	+0.9
2,573,403	+		LRK54_RS11585	0.65	+2.1
2,573,403	+		LRK54_RS11585	0.65	+0.2
2,573,403	+		LRK54_RS11585	0.65	-0.4
2,573,403	+		LRK54_RS11585	0.65	+0.1
2,573,403	+		LRK54_RS11585	0.65	-1.3
2,573,403	+		LRK54_RS11585	0.65	-0.8
2,573,403	+		LRK54_RS11585	0.65	-0.1
2,573,403	+		LRK54_RS11585	0.65	-0.3
2,573,403	+		LRK54_RS11585	0.65	+0.6
2,573,403	+		LRK54_RS11585	0.65	-0.4
2,573,403	+		LRK54_RS11585	0.65	-0.2
2,573,404	-		LRK54_RS11585	0.65	+0.7
2,573,404	-		LRK54_RS11585	0.65	-0.7
2,573,404	-		LRK54_RS11585	0.65	+1.0
2,573,404	-		LRK54_RS11585	0.65	-1.1
2,573,404	-		LRK54_RS11585	0.65	-1.4
2,573,404	-		LRK54_RS11585	0.65	-1.4
2,573,404	-		LRK54_RS11585	0.65	+0.2
2,573,404	-		LRK54_RS11585	0.65	-0.2
2,573,404	-		LRK54_RS11585	0.65	+0.7
2,573,404	-		LRK54_RS11585	0.65	+0.4
2,573,404	-		LRK54_RS11585	0.65	+0.9
2,573,404	-		LRK54_RS11585	0.65	+1.6
2,573,404	-		LRK54_RS11585	0.65	+1.2
2,573,404	-		LRK54_RS11585	0.65	-0.9
2,573,404	-		LRK54_RS11585	0.65	-0.2
2,573,404	-		LRK54_RS11585	0.65	-0.1
2,573,404	-		LRK54_RS11585	0.65	-1.4
2,573,404	-		LRK54_RS11585	0.65	+0.8
2,573,404	-		LRK54_RS11585	0.65	-1.1
2,573,404	-		LRK54_RS11585	0.65	+0.5
2,573,404	-		LRK54_RS11585	0.65	+1.3
2,573,404	-		LRK54_RS11585	0.65	+0.3
2,573,404	-		LRK54_RS11585	0.65	+0.7
2,573,404	-		LRK54_RS11585	0.65	-0.3
2,573,469	+		LRK54_RS11585	0.75	+0.6
2,573,469	+		LRK54_RS11585	0.75	+0.4
2,573,469	+		LRK54_RS11585	0.75	+0.7
2,573,469	+		LRK54_RS11585	0.75	-0.5
2,573,469	+		LRK54_RS11585	0.75	+0.5
2,573,469	+		LRK54_RS11585	0.75	+0.3
2,573,469	+		LRK54_RS11585	0.75	+0.3
2,573,469	+		LRK54_RS11585	0.75	+1.2
2,573,469	+		LRK54_RS11585	0.75	+0.4
2,573,469	+		LRK54_RS11585	0.75	+0.8
2,573,469	+		LRK54_RS11585	0.75	-1.6
2,573,469	+		LRK54_RS11585	0.75	-1.0
2,573,469	+		LRK54_RS11585	0.75	-0.4
2,573,469	+		LRK54_RS11585	0.75	+1.4
2,573,469	+		LRK54_RS11585	0.75	-0.5
2,573,470	-		LRK54_RS11585	0.75	-1.3
2,573,470	-		LRK54_RS11585	0.75	+1.4
2,573,470	-		LRK54_RS11585	0.75	+0.4
2,573,470	-		LRK54_RS11585	0.75	+0.4
2,573,470	-		LRK54_RS11585	0.75	-0.4
2,573,470	-		LRK54_RS11585	0.75	+0.3
2,573,470	-		LRK54_RS11585	0.75	+1.7
2,573,470	-		LRK54_RS11585	0.75	-0.7
2,573,470	-		LRK54_RS11585	0.75	+0.4
2,573,470	-		LRK54_RS11585	0.75	+0.5
2,573,470	-		LRK54_RS11585	0.75	+0.6
2,573,470	-		LRK54_RS11585	0.75	-0.7
2,573,470	-		LRK54_RS11585	0.75	+1.5
2,573,470	-		LRK54_RS11585	0.75	+3.9
2,573,470	-		LRK54_RS11585	0.75	+0.0
2,573,470	-		LRK54_RS11585	0.75	+1.0
2,573,470	-		LRK54_RS11585	0.75	+1.5
2,573,472	+		LRK54_RS11585	0.75	-0.4
2,573,472	+		LRK54_RS11585	0.75	+1.0
2,573,472	+		LRK54_RS11585	0.75	+0.8
2,573,472	+		LRK54_RS11585	0.75	-0.3
2,573,472	+		LRK54_RS11585	0.75	-1.6
2,573,472	+		LRK54_RS11585	0.75	+0.3
2,573,472	+		LRK54_RS11585	0.75	+1.1
2,573,472	+		LRK54_RS11585	0.75	+0.4
2,573,472	+		LRK54_RS11585	0.75	-0.5
2,573,472	+		LRK54_RS11585	0.75	-0.7
2,573,472	+		LRK54_RS11585	0.75	+0.4
2,573,472	+		LRK54_RS11585	0.75	+0.2
2,573,472	+		LRK54_RS11585	0.75	+0.7
2,573,472	+		LRK54_RS11585	0.75	-1.0
2,573,472	+		LRK54_RS11585	0.75	+0.7
2,573,472	+		LRK54_RS11585	0.75	+1.9
2,573,472	+		LRK54_RS11585	0.75	+0.7
2,573,472	+		LRK54_RS11585	0.75	+0.4
2,573,472	+		LRK54_RS11585	0.75	+0.1
2,573,472	+		LRK54_RS11585	0.75	+0.6
2,573,472	+		LRK54_RS11585	0.75	+2.1
2,573,472	+		LRK54_RS11585	0.75	+1.1
2,573,472	+		LRK54_RS11585	0.75	+0.4
2,573,472	+		LRK54_RS11585	0.75	+1.2
2,573,472	+		LRK54_RS11585	0.75	+0.4
2,573,472	+		LRK54_RS11585	0.75	-1.1
2,573,472	+		LRK54_RS11585	0.75	+0.9
2,573,472	+		LRK54_RS11585	0.75	+0.1
2,573,472	+		LRK54_RS11585	0.75	-1.6
2,573,472	+		LRK54_RS11585	0.75	+1.1
2,573,472	+		LRK54_RS11585	0.75	-1.7
2,573,472	+		LRK54_RS11585	0.75	+0.9
2,573,472	+		LRK54_RS11585	0.75	+1.2
2,573,472	+		LRK54_RS11585	0.75	+0.0
2,573,473	-		LRK54_RS11585	0.75	+1.4
2,573,473	-		LRK54_RS11585	0.75	+0.7
2,573,473	-		LRK54_RS11585	0.75	-0.1
2,573,473	-		LRK54_RS11585	0.75	+1.1
2,573,473	-		LRK54_RS11585	0.75	+0.5
2,573,473	-		LRK54_RS11585	0.75	+0.1
2,573,473	-		LRK54_RS11585	0.75	-0.7
2,573,473	-		LRK54_RS11585	0.75	+0.3
2,573,473	-		LRK54_RS11585	0.75	-1.7
2,573,473	-		LRK54_RS11585	0.75	+0.3
2,573,473	-		LRK54_RS11585	0.75	-0.9
2,573,473	-		LRK54_RS11585	0.75	-0.3
2,573,473	-		LRK54_RS11585	0.75	-0.9
2,573,473	-		LRK54_RS11585	0.75	+3.0
2,573,473	-		LRK54_RS11585	0.75	-0.6
2,573,473	-		LRK54_RS11585	0.75	+0.6
2,573,473	-		LRK54_RS11585	0.75	-0.0
2,573,473	-		LRK54_RS11585	0.75	-0.4
2,573,473	-		LRK54_RS11585	0.75	-0.5
2,573,473	-		LRK54_RS11585	0.75	-0.2
2,573,473	-		LRK54_RS11585	0.75	-0.4
2,573,473	-		LRK54_RS11585	0.75	+1.4
2,573,473	-		LRK54_RS11585	0.75	+1.0
2,573,473	-		LRK54_RS11585	0.75	-0.2
2,573,625	+				+0.6
2,573,625	+				+0.6
2,573,625	+				-0.0
2,573,625	+				+3.5
2,573,625	+				-1.0
2,573,625	+				-1.1
2,573,625	+				-0.4
2,573,625	+				+0.8
2,573,626	-				+0.1
2,573,626	-				+1.1
2,573,626	-				+0.8
2,573,626	-				+0.2
2,573,626	-				+0.5
2,573,731	+				+0.8
2,573,731	+				+0.6
2,573,731	+				+1.4
2,573,731	+				+2.7
2,573,732	-				+0.5
2,573,732	-				+0.4
2,573,732	-				+0.7
2,573,732	-				-2.0
2,573,732	-				-0.2
2,573,784	+				+1.1
2,573,784	+				-0.4
2,573,784	+				+0.6
2,573,848	+				+0.2
2,573,848	+				-0.3
2,573,848	+				-1.4
2,573,848	+				-1.3
2,573,848	+				-1.4
2,573,848	+				-0.4
2,573,848	+				+1.6