Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS16185

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
3,559,449	+				-1.4
3,559,449	+				-0.2
3,559,462	+				-0.9
3,560,268	+				-1.2
3,560,268	+				+0.4
3,560,268	+				-0.7
3,560,269	-				-0.7
3,560,269	-				+0.3
3,560,269	-				-1.3
3,560,269	-				-1.0
3,560,273	+				-1.0
3,560,273	+				-0.4
3,560,274	-				-0.3
3,560,274	-				-0.0
3,560,274	-				-1.3
3,560,274	-				-1.6
3,560,274	-				+0.5
3,560,296	+				+0.3
3,560,296	+				-0.8
3,560,297	-				-0.3
3,560,297	-				-1.4
3,560,297	-				-3.4
3,560,316	+				+0.3
3,560,316	+				+1.1
3,560,316	+				+0.7
3,560,316	+				-0.0
3,560,317	-				-0.6
3,560,317	-				-1.8
3,560,317	-				-0.3
3,560,317	-				-1.3
3,560,317	-				+1.7
3,560,637	+		LRK54_RS16190	0.15	-1.5
3,560,637	+		LRK54_RS16190	0.15	-1.5
3,560,637	+		LRK54_RS16190	0.15	-0.3
3,560,637	+		LRK54_RS16190	0.15	+1.4
3,560,638	-		LRK54_RS16190	0.15	-0.9
3,560,638	-		LRK54_RS16190	0.15	-1.3
3,560,887	+		LRK54_RS16190	0.72	+0.1
3,560,888	-		LRK54_RS16190	0.72	+2.3
3,560,888	-		LRK54_RS16190	0.72	-1.8
3,560,888	-		LRK54_RS16190	0.72	+1.1