Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS07005

Experiment: planktonic; Day1; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day1; NLDM;
1,502,368	+		LRK54_RS07000	0.17	-0.9
1,502,368	+		LRK54_RS07000	0.17	+0.4
1,502,368	+		LRK54_RS07000	0.17	+0.7
1,502,368	+		LRK54_RS07000	0.17	-1.2
1,502,368	+		LRK54_RS07000	0.17	-0.7
1,502,368	+		LRK54_RS07000	0.17	-0.4
1,502,368	+		LRK54_RS07000	0.17	+0.3
1,502,368	+		LRK54_RS07000	0.17	-1.3
1,502,368	+		LRK54_RS07000	0.17	+0.1
1,502,368	+		LRK54_RS07000	0.17	-0.2
1,502,368	+		LRK54_RS07000	0.17	-1.9
1,502,369	-		LRK54_RS07000	0.17	-0.4
1,502,369	-		LRK54_RS07000	0.17	+0.1
1,502,369	-		LRK54_RS07000	0.17	+0.9
1,502,369	-		LRK54_RS07000	0.17	-1.2
1,502,369	-		LRK54_RS07000	0.17	+0.1
1,502,369	-		LRK54_RS07000	0.17	+0.0
1,502,369	-		LRK54_RS07000	0.17	+1.9
1,502,369	-		LRK54_RS07000	0.17	-1.2
1,502,369	-		LRK54_RS07000	0.17	+0.8
1,502,369	-		LRK54_RS07000	0.17	+0.4
1,502,369	-		LRK54_RS07000	0.17	-0.1
1,502,369	-		LRK54_RS07000	0.17	-0.6
1,502,369	-		LRK54_RS07000	0.17	-0.9
1,502,369	-		LRK54_RS07000	0.17	-0.3
1,502,369	-		LRK54_RS07000	0.17	-0.3
1,502,369	-		LRK54_RS07000	0.17	+0.8
1,502,369	-		LRK54_RS07000	0.17	-0.3
1,502,369	-		LRK54_RS07000	0.17	-1.8
1,502,372	+		LRK54_RS07000	0.17	-1.8
1,502,372	+		LRK54_RS07000	0.17	-0.9
1,502,372	+		LRK54_RS07000	0.17	-0.5
1,502,372	+		LRK54_RS07000	0.17	-0.7
1,502,372	+		LRK54_RS07000	0.17	-0.9
1,502,372	+		LRK54_RS07000	0.17	-3.1
1,502,372	+		LRK54_RS07000	0.17	-1.3
1,502,372	+		LRK54_RS07000	0.17	-2.2
1,502,373	-		LRK54_RS07000	0.17	-0.3
1,502,373	-		LRK54_RS07000	0.17	-0.3
1,502,373	-		LRK54_RS07000	0.17	-0.6
1,502,373	-		LRK54_RS07000	0.17	-1.9
1,502,373	-		LRK54_RS07000	0.17	-0.1
1,502,373	-		LRK54_RS07000	0.17	-1.3
1,502,373	-		LRK54_RS07000	0.17	-0.3
1,502,373	-		LRK54_RS07000	0.17	-1.3
1,502,373	-		LRK54_RS07000	0.17	-1.1
1,502,373	-		LRK54_RS07000	0.17	+0.5
1,502,373	-		LRK54_RS07000	0.17	-2.7
1,502,373	-		LRK54_RS07000	0.17	+0.5
1,502,373	-		LRK54_RS07000	0.17	-0.3
1,502,380	+		LRK54_RS07000	0.18	-2.0
1,502,380	+		LRK54_RS07000	0.18	+1.1
1,502,407	+		LRK54_RS07000	0.21	+0.5
1,502,407	+		LRK54_RS07000	0.21	+0.2
1,502,407	+		LRK54_RS07000	0.21	-0.7
1,502,407	+		LRK54_RS07000	0.21	-0.4
1,502,407	+		LRK54_RS07000	0.21	+1.7
1,502,407	+		LRK54_RS07000	0.21	+0.2
1,502,408	-		LRK54_RS07000	0.21	-0.8
1,502,408	-		LRK54_RS07000	0.21	-1.1
1,502,408	-		LRK54_RS07000	0.21	+0.7
1,502,426	+		LRK54_RS07000	0.22	-0.6
1,502,426	+		LRK54_RS07000	0.22	-0.1
1,502,426	+		LRK54_RS07000	0.22	+2.7
1,502,426	+		LRK54_RS07000	0.22	-0.4
1,502,426	+		LRK54_RS07000	0.22	+0.2
1,502,426	+		LRK54_RS07000	0.22	-0.5
1,502,426	+		LRK54_RS07000	0.22	-0.2
1,502,426	+		LRK54_RS07000	0.22	-0.9
1,502,426	+		LRK54_RS07000	0.22	+0.5
1,502,426	+		LRK54_RS07000	0.22	-0.8
1,502,426	+		LRK54_RS07000	0.22	-1.0
1,502,426	+		LRK54_RS07000	0.22	+0.7
1,502,426	+		LRK54_RS07000	0.22	+1.7
1,502,426	+		LRK54_RS07000	0.22	+0.5
1,502,426	+		LRK54_RS07000	0.22	-0.1
1,502,426	+		LRK54_RS07000	0.22	-0.8
1,502,426	+		LRK54_RS07000	0.22	+0.9
1,502,426	+		LRK54_RS07000	0.22	+0.0
1,502,426	+		LRK54_RS07000	0.22	-1.8
1,502,427	-		LRK54_RS07000	0.23	-0.8
1,502,427	-		LRK54_RS07000	0.23	+1.5
1,502,427	-		LRK54_RS07000	0.23	-0.4
1,502,427	-		LRK54_RS07000	0.23	-0.3
1,502,427	-		LRK54_RS07000	0.23	-0.4
1,502,427	-		LRK54_RS07000	0.23	+0.4
1,502,427	-		LRK54_RS07000	0.23	-0.1
1,502,427	-		LRK54_RS07000	0.23	+1.1
1,502,427	-		LRK54_RS07000	0.23	+0.2
1,502,427	-		LRK54_RS07000	0.23	-0.5
1,502,427	-		LRK54_RS07000	0.23	-1.0
1,502,427	-		LRK54_RS07000	0.23	+0.8
1,502,427	-		LRK54_RS07000	0.23	+1.2
1,502,429	+		LRK54_RS07000	0.23	-2.3
1,502,429	+		LRK54_RS07000	0.23	-0.6
1,502,429	+		LRK54_RS07000	0.23	-1.5
1,502,429	+		LRK54_RS07000	0.23	-0.4
1,502,429	+		LRK54_RS07000	0.23	+1.1
1,502,429	+		LRK54_RS07000	0.23	-0.4
1,502,429	+		LRK54_RS07000	0.23	+1.9
1,502,429	+		LRK54_RS07000	0.23	-1.3
1,502,429	+		LRK54_RS07000	0.23	-1.2
1,502,429	+		LRK54_RS07000	0.23	-0.5
1,502,429	+		LRK54_RS07000	0.23	+0.5
1,502,429	+		LRK54_RS07000	0.23	-0.0
1,502,429	+		LRK54_RS07000	0.23	+1.9
1,502,429	+		LRK54_RS07000	0.23	-2.7
1,502,429	+		LRK54_RS07000	0.23	+0.0
1,502,429	+		LRK54_RS07000	0.23	-0.3
1,502,429	+		LRK54_RS07000	0.23	+0.1
1,502,429	+		LRK54_RS07000	0.23	-1.7
1,502,430	-		LRK54_RS07000	0.23	+0.0
1,502,430	-		LRK54_RS07000	0.23	+1.2
1,502,430	-		LRK54_RS07000	0.23	+0.4
1,502,430	-		LRK54_RS07000	0.23	+1.5
1,502,430	-		LRK54_RS07000	0.23	-2.2
1,502,430	-		LRK54_RS07000	0.23	-0.3
1,502,430	-		LRK54_RS07000	0.23	-0.4
1,502,430	-		LRK54_RS07000	0.23	+0.4
1,502,430	-		LRK54_RS07000	0.23	-0.2
1,502,475	+		LRK54_RS07000	0.27	+1.4
1,502,475	+		LRK54_RS07000	0.27	-0.2
1,502,475	+		LRK54_RS07000	0.27	+0.4
1,502,475	+		LRK54_RS07000	0.27	+1.1
1,502,475	+		LRK54_RS07000	0.27	-1.4
1,502,475	+		LRK54_RS07000	0.27	+1.2
1,502,475	+		LRK54_RS07000	0.27	+1.7
1,502,475	+		LRK54_RS07000	0.27	+0.4
1,502,475	+		LRK54_RS07000	0.27	-1.8
1,502,475	+		LRK54_RS07000	0.27	-1.1
1,502,475	+		LRK54_RS07000	0.27	-0.1
1,502,475	+		LRK54_RS07000	0.27	-2.2
1,502,475	+		LRK54_RS07000	0.27	-0.1
1,502,475	+		LRK54_RS07000	0.27	-1.6
1,502,475	+		LRK54_RS07000	0.27	+0.1
1,502,475	+		LRK54_RS07000	0.27	+1.8
1,502,475	+		LRK54_RS07000	0.27	-1.0
1,502,475	+		LRK54_RS07000	0.27	+2.2
1,502,475	+		LRK54_RS07000	0.27	-0.5
1,502,475	+		LRK54_RS07000	0.27	+0.8
1,502,475	+		LRK54_RS07000	0.27	+0.6
1,502,475	+		LRK54_RS07000	0.27	-1.2
1,502,476	-		LRK54_RS07000	0.27	-1.0
1,502,476	-		LRK54_RS07000	0.27	+0.7
1,502,476	-		LRK54_RS07000	0.27	-1.3
1,502,476	-		LRK54_RS07000	0.27	-0.4
1,502,476	-		LRK54_RS07000	0.27	+0.1
1,502,476	-		LRK54_RS07000	0.27	-0.3
1,502,476	-		LRK54_RS07000	0.27	+1.0
1,502,476	-		LRK54_RS07000	0.27	-0.5
1,502,476	-		LRK54_RS07000	0.27	+0.9
1,502,476	-		LRK54_RS07000	0.27	-0.1
1,502,476	-		LRK54_RS07000	0.27	-1.4
1,502,476	-		LRK54_RS07000	0.27	-1.4
1,502,476	-		LRK54_RS07000	0.27	-1.7
1,502,476	-		LRK54_RS07000	0.27	+0.4
1,502,476	-		LRK54_RS07000	0.27	+0.0
1,502,476	-		LRK54_RS07000	0.27	-0.0
1,502,476	-		LRK54_RS07000	0.27	-0.3
1,502,476	-		LRK54_RS07000	0.27	+0.5
1,502,476	-		LRK54_RS07000	0.27	-1.2
1,502,476	-		LRK54_RS07000	0.27	-1.3
1,502,476	-		LRK54_RS07000	0.27	+0.7
1,502,476	-		LRK54_RS07000	0.27	+1.2
1,502,476	-		LRK54_RS07000	0.27	-0.6
1,502,476	-		LRK54_RS07000	0.27	-1.7
1,502,476	-		LRK54_RS07000	0.27	-2.0
1,502,476	-		LRK54_RS07000	0.27	-0.6
1,502,476	-		LRK54_RS07000	0.27	-0.9
1,502,479	+		LRK54_RS07000	0.28	-0.7
1,502,479	+		LRK54_RS07000	0.28	+0.9
1,502,479	+		LRK54_RS07000	0.28	+1.3
1,502,479	+		LRK54_RS07000	0.28	-1.4
1,502,479	+		LRK54_RS07000	0.28	-0.6
1,502,479	+		LRK54_RS07000	0.28	+2.0
1,502,479	+		LRK54_RS07000	0.28	-1.1
1,502,479	+		LRK54_RS07000	0.28	-1.1
1,502,480	-		LRK54_RS07000	0.28	+0.3
1,502,480	-		LRK54_RS07000	0.28	-0.8
1,502,480	-		LRK54_RS07000	0.28	-1.0
1,502,480	-		LRK54_RS07000	0.28	-0.9
1,502,480	-		LRK54_RS07000	0.28	-0.3
1,502,480	-		LRK54_RS07000	0.28	+0.4
1,502,543	+		LRK54_RS07000	0.34	-0.5
1,502,552	+		LRK54_RS07000	0.35	-0.6
1,502,552	+		LRK54_RS07000	0.35	-0.1
1,502,552	+		LRK54_RS07000	0.35	-0.9
1,502,552	+		LRK54_RS07000	0.35	-0.8
1,502,552	+		LRK54_RS07000	0.35	-0.6
1,502,569	+		LRK54_RS07000	0.36	+0.9
1,502,570	-		LRK54_RS07000	0.36	-1.3
1,502,570	-		LRK54_RS07000	0.36	+1.2
1,502,591	+		LRK54_RS07000	0.38	-1.4
1,502,591	+		LRK54_RS07000	0.38	+0.3
1,502,591	+		LRK54_RS07000	0.38	-1.1
1,502,591	+		LRK54_RS07000	0.38	-0.2
1,502,591	+		LRK54_RS07000	0.38	+0.3
1,502,591	+		LRK54_RS07000	0.38	+1.6
1,502,591	+		LRK54_RS07000	0.38	-1.2
1,502,591	+		LRK54_RS07000	0.38	+0.7
1,502,591	+		LRK54_RS07000	0.38	-1.5
1,502,591	+		LRK54_RS07000	0.38	-0.8
1,502,591	+		LRK54_RS07000	0.38	+0.2
1,502,592	-		LRK54_RS07000	0.38	-0.1
1,502,592	-		LRK54_RS07000	0.38	+1.4
1,502,592	-		LRK54_RS07000	0.38	-0.4
1,502,592	-		LRK54_RS07000	0.38	+0.2
1,502,592	-		LRK54_RS07000	0.38	+0.7
1,502,592	-		LRK54_RS07000	0.38	+0.0
1,502,592	-		LRK54_RS07000	0.38	+1.2
1,502,592	-		LRK54_RS07000	0.38	-0.2
1,502,592	-		LRK54_RS07000	0.38	+1.5
1,502,592	-		LRK54_RS07000	0.38	-2.2
1,502,592	-		LRK54_RS07000	0.38	+0.7
1,502,592	-		LRK54_RS07000	0.38	-0.6
1,502,592	-		LRK54_RS07000	0.38	+1.5
1,502,592	-		LRK54_RS07000	0.38	-0.6
1,502,592	-		LRK54_RS07000	0.38	-1.0
1,502,592	-		LRK54_RS07000	0.38	-0.5
1,502,592	-		LRK54_RS07000	0.38	-0.8
1,502,592	-		LRK54_RS07000	0.38	+0.3
1,502,592	-		LRK54_RS07000	0.38	-1.4
1,502,592	-		LRK54_RS07000	0.38	+0.2
1,502,592	-		LRK54_RS07000	0.38	-1.1
1,502,621	+		LRK54_RS07000	0.41	+1.7
1,502,621	+		LRK54_RS07000	0.41	-1.8
1,502,621	+		LRK54_RS07000	0.41	+1.7
1,502,621	+		LRK54_RS07000	0.41	+0.5
1,502,621	+		LRK54_RS07000	0.41	+0.8
1,502,621	+		LRK54_RS07000	0.41	-2.1
1,502,621	+		LRK54_RS07000	0.41	-0.0
1,502,621	+		LRK54_RS07000	0.41	+0.2
1,502,621	+		LRK54_RS07000	0.41	+0.5
1,502,621	+		LRK54_RS07000	0.41	-1.1
1,502,621	+		LRK54_RS07000	0.41	+0.2
1,502,621	+		LRK54_RS07000	0.41	+1.9
1,502,621	+		LRK54_RS07000	0.41	+0.3
1,502,621	+		LRK54_RS07000	0.41	-1.0
1,502,621	+		LRK54_RS07000	0.41	-0.5
1,502,621	+		LRK54_RS07000	0.41	-1.3
1,502,622	-		LRK54_RS07000	0.41	-0.4
1,502,622	-		LRK54_RS07000	0.41	-0.0
1,502,622	-		LRK54_RS07000	0.41	-0.9
1,502,622	-		LRK54_RS07000	0.41	-0.0
1,502,622	-		LRK54_RS07000	0.41	-0.9
1,502,622	-		LRK54_RS07000	0.41	-0.2
1,502,622	-		LRK54_RS07000	0.41	-0.1
1,502,622	-		LRK54_RS07000	0.41	+3.0
1,502,622	-		LRK54_RS07000	0.41	-0.2
1,502,622	-		LRK54_RS07000	0.41	+1.9
1,502,622	-		LRK54_RS07000	0.41	-0.7
1,502,622	-		LRK54_RS07000	0.41	-0.6
1,502,622	-		LRK54_RS07000	0.41	+0.9
1,502,622	-		LRK54_RS07000	0.41	-1.1
1,502,622	-		LRK54_RS07000	0.41	-0.1
1,502,622	-		LRK54_RS07000	0.41	-1.3
1,502,622	-		LRK54_RS07000	0.41	-2.1
1,502,622	-		LRK54_RS07000	0.41	-0.8
1,502,622	-		LRK54_RS07000	0.41	-0.5
1,502,681	+		LRK54_RS07000	0.47	-0.2
1,502,681	+		LRK54_RS07000	0.47	+0.2
1,502,681	+		LRK54_RS07000	0.47	-1.5
1,502,681	+		LRK54_RS07000	0.47	+0.4
1,502,681	+		LRK54_RS07000	0.47	+1.8
1,502,681	+		LRK54_RS07000	0.47	-1.1
1,502,682	-		LRK54_RS07000	0.47	-2.6
1,502,682	-		LRK54_RS07000	0.47	+2.3
1,502,682	-		LRK54_RS07000	0.47	+1.0
1,502,682	-		LRK54_RS07000	0.47	-0.9
1,502,682	-		LRK54_RS07000	0.47	-0.6
1,502,682	-		LRK54_RS07000	0.47	+0.3
1,502,682	-		LRK54_RS07000	0.47	+0.9
1,502,682	-		LRK54_RS07000	0.47	+0.3
1,502,698	+		LRK54_RS07000	0.49	-1.1
1,502,698	+		LRK54_RS07000	0.49	-0.6
1,502,698	+		LRK54_RS07000	0.49	+0.5
1,502,698	+		LRK54_RS07000	0.49	+1.0
1,502,698	+		LRK54_RS07000	0.49	+0.6
1,502,698	+		LRK54_RS07000	0.49	-0.6
1,502,699	-		LRK54_RS07000	0.49	-0.6
1,502,699	-		LRK54_RS07000	0.49	+0.4
1,502,707	+		LRK54_RS07000	0.49	-0.0
1,502,707	+		LRK54_RS07000	0.49	-1.3
1,502,707	+		LRK54_RS07000	0.49	-0.9
1,502,707	+		LRK54_RS07000	0.49	-0.4
1,502,707	+		LRK54_RS07000	0.49	+0.3
1,502,707	+		LRK54_RS07000	0.49	-0.6
1,502,707	+		LRK54_RS07000	0.49	-0.8
1,502,707	+		LRK54_RS07000	0.49	+0.2
1,502,707	+		LRK54_RS07000	0.49	-0.4
1,502,708	-		LRK54_RS07000	0.50	-0.1
1,502,708	-		LRK54_RS07000	0.50	+1.4
1,502,708	-		LRK54_RS07000	0.50	-0.7
1,502,708	-		LRK54_RS07000	0.50	-0.7
1,502,708	-		LRK54_RS07000	0.50	-0.6
1,502,738	+		LRK54_RS07000	0.52	+0.1
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1,503,097	+		LRK54_RS07000	0.87	-2.1
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1,503,145	+				+0.4
1,503,145	+				+0.7
1,503,145	+				-1.1
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1,503,218	+				+1.3
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