Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04322

Experiment: D-Tagatose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04321 and MPMX20_04322 are separated by 308 nucleotidesMPMX20_04322 and MPMX20_04323 are separated by 39 nucleotides MPMX20_04321: MPMX20_04321 - putative oxidoreductase YhhX, at 4,515,413 to 4,516,450 _04321 MPMX20_04322: MPMX20_04322 - L-amino acid N-acetyltransferase AaaT, at 4,516,759 to 4,517,247 _04322 MPMX20_04323: MPMX20_04323 - Glutathione hydrolase proenzyme, at 4,517,287 to 4,519,032 _04323 Position (kb) 4516 4517 4518Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 4515.809 kb on - strand, within MPMX20_04321at 4515.824 kb on + strand, within MPMX20_04321at 4515.863 kb on + strand, within MPMX20_04321at 4515.905 kb on - strand, within MPMX20_04321at 4515.976 kb on + strand, within MPMX20_04321at 4515.991 kb on - strand, within MPMX20_04321at 4516.105 kb on - strand, within MPMX20_04321at 4516.232 kb on + strand, within MPMX20_04321at 4516.266 kb on + strand, within MPMX20_04321at 4516.307 kb on + strand, within MPMX20_04321at 4516.315 kb on - strand, within MPMX20_04321at 4516.315 kb on - strand, within MPMX20_04321at 4516.379 kb on + strandat 4516.387 kb on - strandat 4516.389 kb on + strandat 4516.439 kb on + strandat 4516.461 kb on + strandat 4516.506 kb on + strandat 4516.506 kb on + strandat 4516.506 kb on + strandat 4516.514 kb on - strandat 4516.556 kb on + strandat 4516.564 kb on - strandat 4516.566 kb on + strandat 4516.566 kb on + strandat 4516.566 kb on + strandat 4516.579 kb on - strandat 4516.597 kb on + strandat 4516.622 kb on - strandat 4516.624 kb on - strandat 4516.832 kb on - strand, within MPMX20_04322at 4516.834 kb on - strand, within MPMX20_04322at 4516.847 kb on + strand, within MPMX20_04322at 4516.855 kb on - strand, within MPMX20_04322at 4516.855 kb on - strand, within MPMX20_04322at 4516.855 kb on - strand, within MPMX20_04322at 4516.902 kb on + strand, within MPMX20_04322at 4516.928 kb on + strand, within MPMX20_04322at 4516.928 kb on + strand, within MPMX20_04322at 4516.936 kb on - strand, within MPMX20_04322at 4517.006 kb on + strand, within MPMX20_04322at 4517.048 kb on - strand, within MPMX20_04322at 4517.189 kb on + strand, within MPMX20_04322at 4517.199 kb on + strandat 4517.199 kb on + strandat 4517.199 kb on + strandat 4517.199 kb on + strandat 4517.199 kb on + strandat 4517.207 kb on - strandat 4517.217 kb on - strandat 4517.325 kb on - strandat 4517.338 kb on - strandat 4517.338 kb on - strandat 4517.358 kb on + strandat 4517.373 kb on - strandat 4517.432 kb on - strandat 4517.551 kb on + strand, within MPMX20_04323at 4517.575 kb on + strand, within MPMX20_04323at 4517.580 kb on + strand, within MPMX20_04323at 4517.590 kb on + strand, within MPMX20_04323at 4517.623 kb on - strand, within MPMX20_04323at 4517.802 kb on + strand, within MPMX20_04323at 4517.802 kb on + strand, within MPMX20_04323at 4517.810 kb on - strand, within MPMX20_04323at 4517.810 kb on - strand, within MPMX20_04323at 4517.810 kb on - strand, within MPMX20_04323at 4517.810 kb on - strand, within MPMX20_04323at 4517.817 kb on - strand, within MPMX20_04323at 4517.830 kb on - strand, within MPMX20_04323at 4517.851 kb on - strand, within MPMX20_04323at 4517.884 kb on - strand, within MPMX20_04323at 4517.885 kb on - strand, within MPMX20_04323at 4517.970 kb on + strand, within MPMX20_04323at 4518.058 kb on - strand, within MPMX20_04323at 4518.074 kb on - strand, within MPMX20_04323at 4518.215 kb on + strand, within MPMX20_04323at 4518.223 kb on - strand, within MPMX20_04323at 4518.223 kb on - strand, within MPMX20_04323at 4518.223 kb on - strand, within MPMX20_04323at 4518.223 kb on - strand, within MPMX20_04323at 4518.223 kb on - strand, within MPMX20_04323at 4518.225 kb on - strand, within MPMX20_04323

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Tagatose (C)
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4,515,809 - MPMX20_04321 0.38 +2.1
4,515,824 + MPMX20_04321 0.40 +0.7
4,515,863 + MPMX20_04321 0.43 -0.6
4,515,905 - MPMX20_04321 0.47 -0.8
4,515,976 + MPMX20_04321 0.54 +0.2
4,515,991 - MPMX20_04321 0.56 -2.8
4,516,105 - MPMX20_04321 0.67 -1.2
4,516,232 + MPMX20_04321 0.79 -0.1
4,516,266 + MPMX20_04321 0.82 -2.1
4,516,307 + MPMX20_04321 0.86 -0.3
4,516,315 - MPMX20_04321 0.87 +0.7
4,516,315 - MPMX20_04321 0.87 +2.1
4,516,379 + +1.7
4,516,387 - -0.1
4,516,389 + +0.6
4,516,439 + -0.5
4,516,461 + -2.4
4,516,506 + -2.7
4,516,506 + +0.1
4,516,506 + +0.7
4,516,514 - -1.9
4,516,556 + -0.2
4,516,564 - -1.4
4,516,566 + +1.4
4,516,566 + -2.0
4,516,566 + -1.8
4,516,579 - +1.1
4,516,597 + -1.5
4,516,622 - +0.2
4,516,624 - -2.4
4,516,832 - MPMX20_04322 0.15 -3.2
4,516,834 - MPMX20_04322 0.15 -2.8
4,516,847 + MPMX20_04322 0.18 -2.2
4,516,855 - MPMX20_04322 0.20 +0.8
4,516,855 - MPMX20_04322 0.20 -1.4
4,516,855 - MPMX20_04322 0.20 -2.5
4,516,902 + MPMX20_04322 0.29 +0.9
4,516,928 + MPMX20_04322 0.35 -2.5
4,516,928 + MPMX20_04322 0.35 -2.6
4,516,936 - MPMX20_04322 0.36 -3.7
4,517,006 + MPMX20_04322 0.51 -0.3
4,517,048 - MPMX20_04322 0.59 -0.1
4,517,189 + MPMX20_04322 0.88 +0.5
4,517,199 + +0.5
4,517,199 + -0.3
4,517,199 + +1.0
4,517,199 + +0.8
4,517,199 + +0.6
4,517,207 - +2.0
4,517,217 - +0.7
4,517,325 - -2.3
4,517,338 - -0.8
4,517,338 - -0.1
4,517,358 + -3.6
4,517,373 - +0.1
4,517,432 - -0.1
4,517,551 + MPMX20_04323 0.15 +1.4
4,517,575 + MPMX20_04323 0.16 -1.6
4,517,580 + MPMX20_04323 0.17 +1.5
4,517,590 + MPMX20_04323 0.17 +1.0
4,517,623 - MPMX20_04323 0.19 +0.7
4,517,802 + MPMX20_04323 0.29 -1.2
4,517,802 + MPMX20_04323 0.29 +2.5
4,517,810 - MPMX20_04323 0.30 -1.4
4,517,810 - MPMX20_04323 0.30 +0.3
4,517,810 - MPMX20_04323 0.30 -0.2
4,517,810 - MPMX20_04323 0.30 -0.8
4,517,817 - MPMX20_04323 0.30 +0.7
4,517,830 - MPMX20_04323 0.31 +0.1
4,517,851 - MPMX20_04323 0.32 +1.5
4,517,884 - MPMX20_04323 0.34 -4.1
4,517,885 - MPMX20_04323 0.34 -1.4
4,517,970 + MPMX20_04323 0.39 -2.5
4,518,058 - MPMX20_04323 0.44 -2.5
4,518,074 - MPMX20_04323 0.45 -4.1
4,518,215 + MPMX20_04323 0.53 +1.2
4,518,223 - MPMX20_04323 0.54 -2.3
4,518,223 - MPMX20_04323 0.54 -1.0
4,518,223 - MPMX20_04323 0.54 -3.4
4,518,223 - MPMX20_04323 0.54 +0.8
4,518,223 - MPMX20_04323 0.54 -2.5
4,518,225 - MPMX20_04323 0.54 -1.9

Or see this region's nucleotide sequence