Experiment: D-Tagatose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02337 and MPMX20_02338 are separated by 46 nucleotides MPMX20_02338 and MPMX20_02339 are separated by 42 nucleotides MPMX20_02339 and MPMX20_02340 are separated by 7 nucleotides
MPMX20_02337: MPMX20_02337 - hypothetical protein, at 2,461,984 to 2,463,276
_02337
MPMX20_02338: MPMX20_02338 - Thiol:disulfide interchange protein DsbG, at 2,463,323 to 2,464,081
_02338
MPMX20_02339: MPMX20_02339 - hypothetical protein, at 2,464,124 to 2,464,735
_02339
MPMX20_02340: MPMX20_02340 - Thiol:disulfide interchange protein DsbD, at 2,464,743 to 2,466,776
_02340
Position (kb)
2464
2465 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2463.124 kb on + strand, within MPMX20_02337 at 2463.124 kb on + strand, within MPMX20_02337 at 2463.124 kb on + strand, within MPMX20_02337 at 2463.124 kb on + strand, within MPMX20_02337 at 2463.124 kb on + strand, within MPMX20_02337 at 2463.124 kb on + strand, within MPMX20_02337 at 2463.124 kb on + strand, within MPMX20_02337 at 2463.132 kb on - strand, within MPMX20_02337 at 2463.132 kb on - strand, within MPMX20_02337 at 2463.132 kb on - strand, within MPMX20_02337 at 2463.132 kb on - strand, within MPMX20_02337 at 2463.132 kb on - strand, within MPMX20_02337 at 2463.191 kb on + strand at 2463.196 kb on + strand at 2463.488 kb on - strand, within MPMX20_02338 at 2463.597 kb on + strand, within MPMX20_02338 at 2463.597 kb on + strand, within MPMX20_02338 at 2463.605 kb on - strand, within MPMX20_02338 at 2463.613 kb on - strand, within MPMX20_02338 at 2463.635 kb on - strand, within MPMX20_02338 at 2463.662 kb on - strand, within MPMX20_02338 at 2463.680 kb on - strand, within MPMX20_02338 at 2463.698 kb on + strand, within MPMX20_02338 at 2463.740 kb on - strand, within MPMX20_02338 at 2463.891 kb on + strand, within MPMX20_02338 at 2463.891 kb on + strand, within MPMX20_02338 at 2463.891 kb on + strand, within MPMX20_02338 at 2463.899 kb on - strand, within MPMX20_02338 at 2463.909 kb on + strand, within MPMX20_02338 at 2463.925 kb on + strand, within MPMX20_02338 at 2463.933 kb on - strand, within MPMX20_02338 at 2463.933 kb on - strand, within MPMX20_02338 at 2463.980 kb on + strand, within MPMX20_02338 at 2464.008 kb on - strand at 2464.039 kb on + strand at 2464.039 kb on + strand at 2464.039 kb on + strand at 2464.107 kb on + strand at 2464.115 kb on + strand at 2464.123 kb on - strand at 2464.123 kb on - strand at 2464.165 kb on + strand at 2464.165 kb on + strand at 2464.165 kb on + strand at 2464.165 kb on + strand at 2464.165 kb on + strand at 2464.173 kb on - strand at 2464.173 kb on - strand at 2464.187 kb on + strand, within MPMX20_02339 at 2464.197 kb on + strand, within MPMX20_02339 at 2464.205 kb on - strand, within MPMX20_02339 at 2464.207 kb on + strand, within MPMX20_02339 at 2464.352 kb on - strand, within MPMX20_02339 at 2464.412 kb on + strand, within MPMX20_02339 at 2464.544 kb on + strand, within MPMX20_02339 at 2464.544 kb on + strand, within MPMX20_02339 at 2464.552 kb on - strand, within MPMX20_02339 at 2464.552 kb on - strand, within MPMX20_02339 at 2464.552 kb on - strand, within MPMX20_02339 at 2464.632 kb on + strand, within MPMX20_02339 at 2464.633 kb on - strand, within MPMX20_02339 at 2464.640 kb on - strand, within MPMX20_02339 at 2464.673 kb on - strand, within MPMX20_02339 at 2464.680 kb on + strand at 2464.680 kb on + strand at 2464.690 kb on + strand at 2464.695 kb on + strand at 2464.705 kb on - strand at 2464.705 kb on - strand at 2464.754 kb on - strand at 2464.758 kb on + strand at 2464.771 kb on - strand at 2464.860 kb on - strand at 2464.860 kb on - strand at 2464.897 kb on + strand at 2464.905 kb on - strand at 2464.955 kb on + strand, within MPMX20_02340 at 2464.997 kb on + strand, within MPMX20_02340 at 2464.999 kb on + strand, within MPMX20_02340 at 2465.005 kb on - strand, within MPMX20_02340 at 2465.032 kb on + strand, within MPMX20_02340 at 2465.040 kb on - strand, within MPMX20_02340 at 2465.042 kb on + strand, within MPMX20_02340 at 2465.042 kb on + strand, within MPMX20_02340 at 2465.042 kb on + strand, within MPMX20_02340 at 2465.042 kb on + strand, within MPMX20_02340 at 2465.042 kb on + strand, within MPMX20_02340 at 2465.050 kb on - strand, within MPMX20_02340 at 2465.050 kb on - strand, within MPMX20_02340 at 2465.099 kb on - strand, within MPMX20_02340 at 2465.110 kb on - strand, within MPMX20_02340 at 2465.185 kb on + strand, within MPMX20_02340 at 2465.185 kb on + strand, within MPMX20_02340 at 2465.193 kb on - strand, within MPMX20_02340 at 2465.193 kb on - strand, within MPMX20_02340 at 2465.193 kb on - strand, within MPMX20_02340 at 2465.226 kb on + strand, within MPMX20_02340 at 2465.283 kb on - strand, within MPMX20_02340 at 2465.283 kb on - strand, within MPMX20_02340 at 2465.285 kb on + strand, within MPMX20_02340 at 2465.285 kb on + strand, within MPMX20_02340 at 2465.293 kb on - strand, within MPMX20_02340 at 2465.293 kb on - strand, within MPMX20_02340 at 2465.298 kb on - strand, within MPMX20_02340 at 2465.298 kb on - strand, within MPMX20_02340 at 2465.374 kb on + strand, within MPMX20_02340 at 2465.374 kb on + strand, within MPMX20_02340 at 2465.470 kb on + strand, within MPMX20_02340 at 2465.480 kb on - strand, within MPMX20_02340 at 2465.489 kb on + strand, within MPMX20_02340 at 2465.497 kb on - strand, within MPMX20_02340 at 2465.527 kb on - strand, within MPMX20_02340 at 2465.527 kb on - strand, within MPMX20_02340 at 2465.527 kb on - strand, within MPMX20_02340 at 2465.543 kb on - strand, within MPMX20_02340 at 2465.649 kb on - strand, within MPMX20_02340 at 2465.727 kb on - strand, within MPMX20_02340 at 2465.727 kb on - strand, within MPMX20_02340
Per-strain Table
Position Strand Gene LocusTag Fraction D-Tagatose (C) remove 2,463,124 + MPMX20_02337 0.88 -0.6 2,463,124 + MPMX20_02337 0.88 -2.4 2,463,124 + MPMX20_02337 0.88 +0.3 2,463,124 + MPMX20_02337 0.88 +1.0 2,463,124 + MPMX20_02337 0.88 -1.6 2,463,124 + MPMX20_02337 0.88 +0.6 2,463,124 + MPMX20_02337 0.88 +0.1 2,463,132 - MPMX20_02337 0.89 +1.3 2,463,132 - MPMX20_02337 0.89 +0.6 2,463,132 - MPMX20_02337 0.89 -2.9 2,463,132 - MPMX20_02337 0.89 -0.7 2,463,132 - MPMX20_02337 0.89 -0.8 2,463,191 + -3.8 2,463,196 + +0.0 2,463,488 - MPMX20_02338 0.22 -1.0 2,463,597 + MPMX20_02338 0.36 -1.7 2,463,597 + MPMX20_02338 0.36 -0.1 2,463,605 - MPMX20_02338 0.37 +0.5 2,463,613 - MPMX20_02338 0.38 +0.4 2,463,635 - MPMX20_02338 0.41 +1.8 2,463,662 - MPMX20_02338 0.45 -0.7 2,463,680 - MPMX20_02338 0.47 +1.2 2,463,698 + MPMX20_02338 0.49 +0.5 2,463,740 - MPMX20_02338 0.55 +1.0 2,463,891 + MPMX20_02338 0.75 -1.8 2,463,891 + MPMX20_02338 0.75 -0.1 2,463,891 + MPMX20_02338 0.75 -0.7 2,463,899 - MPMX20_02338 0.76 -1.4 2,463,909 + MPMX20_02338 0.77 +1.2 2,463,925 + MPMX20_02338 0.79 -0.8 2,463,933 - MPMX20_02338 0.80 +0.3 2,463,933 - MPMX20_02338 0.80 -3.3 2,463,980 + MPMX20_02338 0.87 +0.0 2,464,008 - +1.5 2,464,039 + -3.3 2,464,039 + +0.4 2,464,039 + -0.2 2,464,107 + -2.8 2,464,115 + -0.8 2,464,123 - -0.3 2,464,123 - +0.6 2,464,165 + -1.0 2,464,165 + -0.1 2,464,165 + -2.0 2,464,165 + +1.1 2,464,165 + -1.6 2,464,173 - +0.4 2,464,173 - -2.9 2,464,187 + MPMX20_02339 0.10 -2.8 2,464,197 + MPMX20_02339 0.12 -1.1 2,464,205 - MPMX20_02339 0.13 -0.4 2,464,207 + MPMX20_02339 0.14 -0.4 2,464,352 - MPMX20_02339 0.37 -1.9 2,464,412 + MPMX20_02339 0.47 -3.0 2,464,544 + MPMX20_02339 0.69 -1.5 2,464,544 + MPMX20_02339 0.69 -0.6 2,464,552 - MPMX20_02339 0.70 -3.4 2,464,552 - MPMX20_02339 0.70 +1.4 2,464,552 - MPMX20_02339 0.70 -0.1 2,464,632 + MPMX20_02339 0.83 -1.4 2,464,633 - MPMX20_02339 0.83 -3.5 2,464,640 - MPMX20_02339 0.84 -2.1 2,464,673 - MPMX20_02339 0.90 +0.3 2,464,680 + +0.3 2,464,680 + +0.4 2,464,690 + +0.3 2,464,695 + -3.1 2,464,705 - -1.7 2,464,705 - -2.6 2,464,754 - -0.1 2,464,758 + -0.7 2,464,771 - +0.7 2,464,860 - -0.4 2,464,860 - +0.8 2,464,897 + +0.1 2,464,905 - -3.1 2,464,955 + MPMX20_02340 0.10 +0.1 2,464,997 + MPMX20_02340 0.12 +0.9 2,464,999 + MPMX20_02340 0.13 +0.4 2,465,005 - MPMX20_02340 0.13 -3.3 2,465,032 + MPMX20_02340 0.14 +0.3 2,465,040 - MPMX20_02340 0.15 -3.0 2,465,042 + MPMX20_02340 0.15 +0.8 2,465,042 + MPMX20_02340 0.15 +0.3 2,465,042 + MPMX20_02340 0.15 -3.6 2,465,042 + MPMX20_02340 0.15 +0.4 2,465,042 + MPMX20_02340 0.15 -0.8 2,465,050 - MPMX20_02340 0.15 +1.1 2,465,050 - MPMX20_02340 0.15 +0.3 2,465,099 - MPMX20_02340 0.18 -0.9 2,465,110 - MPMX20_02340 0.18 -1.1 2,465,185 + MPMX20_02340 0.22 -2.3 2,465,185 + MPMX20_02340 0.22 +0.6 2,465,193 - MPMX20_02340 0.22 -1.6 2,465,193 - MPMX20_02340 0.22 +0.1 2,465,193 - MPMX20_02340 0.22 +1.8 2,465,226 + MPMX20_02340 0.24 -0.1 2,465,283 - MPMX20_02340 0.27 +0.1 2,465,283 - MPMX20_02340 0.27 +0.4 2,465,285 + MPMX20_02340 0.27 -2.0 2,465,285 + MPMX20_02340 0.27 +1.4 2,465,293 - MPMX20_02340 0.27 -0.1 2,465,293 - MPMX20_02340 0.27 -1.1 2,465,298 - MPMX20_02340 0.27 -1.2 2,465,298 - MPMX20_02340 0.27 +0.1 2,465,374 + MPMX20_02340 0.31 +0.5 2,465,374 + MPMX20_02340 0.31 -1.7 2,465,470 + MPMX20_02340 0.36 -0.6 2,465,480 - MPMX20_02340 0.36 -3.3 2,465,489 + MPMX20_02340 0.37 +2.1 2,465,497 - MPMX20_02340 0.37 -1.7 2,465,527 - MPMX20_02340 0.39 -0.9 2,465,527 - MPMX20_02340 0.39 +1.1 2,465,527 - MPMX20_02340 0.39 -0.7 2,465,543 - MPMX20_02340 0.39 -1.7 2,465,649 - MPMX20_02340 0.45 -2.3 2,465,727 - MPMX20_02340 0.48 +0.2 2,465,727 - MPMX20_02340 0.48 +0.3
Or see this region's nucleotide sequence