Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02339

Experiment: D-Tagatose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02337 and MPMX20_02338 are separated by 46 nucleotidesMPMX20_02338 and MPMX20_02339 are separated by 42 nucleotidesMPMX20_02339 and MPMX20_02340 are separated by 7 nucleotides MPMX20_02337: MPMX20_02337 - hypothetical protein, at 2,461,984 to 2,463,276 _02337 MPMX20_02338: MPMX20_02338 - Thiol:disulfide interchange protein DsbG, at 2,463,323 to 2,464,081 _02338 MPMX20_02339: MPMX20_02339 - hypothetical protein, at 2,464,124 to 2,464,735 _02339 MPMX20_02340: MPMX20_02340 - Thiol:disulfide interchange protein DsbD, at 2,464,743 to 2,466,776 _02340 Position (kb) 2464 2465Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 2463.124 kb on + strand, within MPMX20_02337at 2463.124 kb on + strand, within MPMX20_02337at 2463.124 kb on + strand, within MPMX20_02337at 2463.124 kb on + strand, within MPMX20_02337at 2463.124 kb on + strand, within MPMX20_02337at 2463.124 kb on + strand, within MPMX20_02337at 2463.124 kb on + strand, within MPMX20_02337at 2463.132 kb on - strand, within MPMX20_02337at 2463.132 kb on - strand, within MPMX20_02337at 2463.132 kb on - strand, within MPMX20_02337at 2463.132 kb on - strand, within MPMX20_02337at 2463.132 kb on - strand, within MPMX20_02337at 2463.191 kb on + strandat 2463.196 kb on + strandat 2463.488 kb on - strand, within MPMX20_02338at 2463.597 kb on + strand, within MPMX20_02338at 2463.597 kb on + strand, within MPMX20_02338at 2463.605 kb on - strand, within MPMX20_02338at 2463.613 kb on - strand, within MPMX20_02338at 2463.635 kb on - strand, within MPMX20_02338at 2463.662 kb on - strand, within MPMX20_02338at 2463.680 kb on - strand, within MPMX20_02338at 2463.698 kb on + strand, within MPMX20_02338at 2463.740 kb on - strand, within MPMX20_02338at 2463.891 kb on + strand, within MPMX20_02338at 2463.891 kb on + strand, within MPMX20_02338at 2463.891 kb on + strand, within MPMX20_02338at 2463.899 kb on - strand, within MPMX20_02338at 2463.909 kb on + strand, within MPMX20_02338at 2463.925 kb on + strand, within MPMX20_02338at 2463.933 kb on - strand, within MPMX20_02338at 2463.933 kb on - strand, within MPMX20_02338at 2463.980 kb on + strand, within MPMX20_02338at 2464.008 kb on - strandat 2464.039 kb on + strandat 2464.039 kb on + strandat 2464.039 kb on + strandat 2464.107 kb on + strandat 2464.115 kb on + strandat 2464.123 kb on - strandat 2464.123 kb on - strandat 2464.165 kb on + strandat 2464.165 kb on + strandat 2464.165 kb on + strandat 2464.165 kb on + strandat 2464.165 kb on + strandat 2464.173 kb on - strandat 2464.173 kb on - strandat 2464.187 kb on + strand, within MPMX20_02339at 2464.197 kb on + strand, within MPMX20_02339at 2464.205 kb on - strand, within MPMX20_02339at 2464.207 kb on + strand, within MPMX20_02339at 2464.352 kb on - strand, within MPMX20_02339at 2464.412 kb on + strand, within MPMX20_02339at 2464.544 kb on + strand, within MPMX20_02339at 2464.544 kb on + strand, within MPMX20_02339at 2464.552 kb on - strand, within MPMX20_02339at 2464.552 kb on - strand, within MPMX20_02339at 2464.552 kb on - strand, within MPMX20_02339at 2464.632 kb on + strand, within MPMX20_02339at 2464.633 kb on - strand, within MPMX20_02339at 2464.640 kb on - strand, within MPMX20_02339at 2464.673 kb on - strand, within MPMX20_02339at 2464.680 kb on + strandat 2464.680 kb on + strandat 2464.690 kb on + strandat 2464.695 kb on + strandat 2464.705 kb on - strandat 2464.705 kb on - strandat 2464.754 kb on - strandat 2464.758 kb on + strandat 2464.771 kb on - strandat 2464.860 kb on - strandat 2464.860 kb on - strandat 2464.897 kb on + strandat 2464.905 kb on - strandat 2464.955 kb on + strand, within MPMX20_02340at 2464.997 kb on + strand, within MPMX20_02340at 2464.999 kb on + strand, within MPMX20_02340at 2465.005 kb on - strand, within MPMX20_02340at 2465.032 kb on + strand, within MPMX20_02340at 2465.040 kb on - strand, within MPMX20_02340at 2465.042 kb on + strand, within MPMX20_02340at 2465.042 kb on + strand, within MPMX20_02340at 2465.042 kb on + strand, within MPMX20_02340at 2465.042 kb on + strand, within MPMX20_02340at 2465.042 kb on + strand, within MPMX20_02340at 2465.050 kb on - strand, within MPMX20_02340at 2465.050 kb on - strand, within MPMX20_02340at 2465.099 kb on - strand, within MPMX20_02340at 2465.110 kb on - strand, within MPMX20_02340at 2465.185 kb on + strand, within MPMX20_02340at 2465.185 kb on + strand, within MPMX20_02340at 2465.193 kb on - strand, within MPMX20_02340at 2465.193 kb on - strand, within MPMX20_02340at 2465.193 kb on - strand, within MPMX20_02340at 2465.226 kb on + strand, within MPMX20_02340at 2465.283 kb on - strand, within MPMX20_02340at 2465.283 kb on - strand, within MPMX20_02340at 2465.285 kb on + strand, within MPMX20_02340at 2465.285 kb on + strand, within MPMX20_02340at 2465.293 kb on - strand, within MPMX20_02340at 2465.293 kb on - strand, within MPMX20_02340at 2465.298 kb on - strand, within MPMX20_02340at 2465.298 kb on - strand, within MPMX20_02340at 2465.374 kb on + strand, within MPMX20_02340at 2465.374 kb on + strand, within MPMX20_02340at 2465.470 kb on + strand, within MPMX20_02340at 2465.480 kb on - strand, within MPMX20_02340at 2465.489 kb on + strand, within MPMX20_02340at 2465.497 kb on - strand, within MPMX20_02340at 2465.527 kb on - strand, within MPMX20_02340at 2465.527 kb on - strand, within MPMX20_02340at 2465.527 kb on - strand, within MPMX20_02340at 2465.543 kb on - strand, within MPMX20_02340at 2465.649 kb on - strand, within MPMX20_02340at 2465.727 kb on - strand, within MPMX20_02340at 2465.727 kb on - strand, within MPMX20_02340

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Tagatose (C)
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2,463,124 + MPMX20_02337 0.88 -0.6
2,463,124 + MPMX20_02337 0.88 -2.4
2,463,124 + MPMX20_02337 0.88 +0.3
2,463,124 + MPMX20_02337 0.88 +1.0
2,463,124 + MPMX20_02337 0.88 -1.6
2,463,124 + MPMX20_02337 0.88 +0.6
2,463,124 + MPMX20_02337 0.88 +0.1
2,463,132 - MPMX20_02337 0.89 +1.3
2,463,132 - MPMX20_02337 0.89 +0.6
2,463,132 - MPMX20_02337 0.89 -2.9
2,463,132 - MPMX20_02337 0.89 -0.7
2,463,132 - MPMX20_02337 0.89 -0.8
2,463,191 + -3.8
2,463,196 + +0.0
2,463,488 - MPMX20_02338 0.22 -1.0
2,463,597 + MPMX20_02338 0.36 -1.7
2,463,597 + MPMX20_02338 0.36 -0.1
2,463,605 - MPMX20_02338 0.37 +0.5
2,463,613 - MPMX20_02338 0.38 +0.4
2,463,635 - MPMX20_02338 0.41 +1.8
2,463,662 - MPMX20_02338 0.45 -0.7
2,463,680 - MPMX20_02338 0.47 +1.2
2,463,698 + MPMX20_02338 0.49 +0.5
2,463,740 - MPMX20_02338 0.55 +1.0
2,463,891 + MPMX20_02338 0.75 -1.8
2,463,891 + MPMX20_02338 0.75 -0.1
2,463,891 + MPMX20_02338 0.75 -0.7
2,463,899 - MPMX20_02338 0.76 -1.4
2,463,909 + MPMX20_02338 0.77 +1.2
2,463,925 + MPMX20_02338 0.79 -0.8
2,463,933 - MPMX20_02338 0.80 +0.3
2,463,933 - MPMX20_02338 0.80 -3.3
2,463,980 + MPMX20_02338 0.87 +0.0
2,464,008 - +1.5
2,464,039 + -3.3
2,464,039 + +0.4
2,464,039 + -0.2
2,464,107 + -2.8
2,464,115 + -0.8
2,464,123 - -0.3
2,464,123 - +0.6
2,464,165 + -1.0
2,464,165 + -0.1
2,464,165 + -2.0
2,464,165 + +1.1
2,464,165 + -1.6
2,464,173 - +0.4
2,464,173 - -2.9
2,464,187 + MPMX20_02339 0.10 -2.8
2,464,197 + MPMX20_02339 0.12 -1.1
2,464,205 - MPMX20_02339 0.13 -0.4
2,464,207 + MPMX20_02339 0.14 -0.4
2,464,352 - MPMX20_02339 0.37 -1.9
2,464,412 + MPMX20_02339 0.47 -3.0
2,464,544 + MPMX20_02339 0.69 -1.5
2,464,544 + MPMX20_02339 0.69 -0.6
2,464,552 - MPMX20_02339 0.70 -3.4
2,464,552 - MPMX20_02339 0.70 +1.4
2,464,552 - MPMX20_02339 0.70 -0.1
2,464,632 + MPMX20_02339 0.83 -1.4
2,464,633 - MPMX20_02339 0.83 -3.5
2,464,640 - MPMX20_02339 0.84 -2.1
2,464,673 - MPMX20_02339 0.90 +0.3
2,464,680 + +0.3
2,464,680 + +0.4
2,464,690 + +0.3
2,464,695 + -3.1
2,464,705 - -1.7
2,464,705 - -2.6
2,464,754 - -0.1
2,464,758 + -0.7
2,464,771 - +0.7
2,464,860 - -0.4
2,464,860 - +0.8
2,464,897 + +0.1
2,464,905 - -3.1
2,464,955 + MPMX20_02340 0.10 +0.1
2,464,997 + MPMX20_02340 0.12 +0.9
2,464,999 + MPMX20_02340 0.13 +0.4
2,465,005 - MPMX20_02340 0.13 -3.3
2,465,032 + MPMX20_02340 0.14 +0.3
2,465,040 - MPMX20_02340 0.15 -3.0
2,465,042 + MPMX20_02340 0.15 +0.8
2,465,042 + MPMX20_02340 0.15 +0.3
2,465,042 + MPMX20_02340 0.15 -3.6
2,465,042 + MPMX20_02340 0.15 +0.4
2,465,042 + MPMX20_02340 0.15 -0.8
2,465,050 - MPMX20_02340 0.15 +1.1
2,465,050 - MPMX20_02340 0.15 +0.3
2,465,099 - MPMX20_02340 0.18 -0.9
2,465,110 - MPMX20_02340 0.18 -1.1
2,465,185 + MPMX20_02340 0.22 -2.3
2,465,185 + MPMX20_02340 0.22 +0.6
2,465,193 - MPMX20_02340 0.22 -1.6
2,465,193 - MPMX20_02340 0.22 +0.1
2,465,193 - MPMX20_02340 0.22 +1.8
2,465,226 + MPMX20_02340 0.24 -0.1
2,465,283 - MPMX20_02340 0.27 +0.1
2,465,283 - MPMX20_02340 0.27 +0.4
2,465,285 + MPMX20_02340 0.27 -2.0
2,465,285 + MPMX20_02340 0.27 +1.4
2,465,293 - MPMX20_02340 0.27 -0.1
2,465,293 - MPMX20_02340 0.27 -1.1
2,465,298 - MPMX20_02340 0.27 -1.2
2,465,298 - MPMX20_02340 0.27 +0.1
2,465,374 + MPMX20_02340 0.31 +0.5
2,465,374 + MPMX20_02340 0.31 -1.7
2,465,470 + MPMX20_02340 0.36 -0.6
2,465,480 - MPMX20_02340 0.36 -3.3
2,465,489 + MPMX20_02340 0.37 +2.1
2,465,497 - MPMX20_02340 0.37 -1.7
2,465,527 - MPMX20_02340 0.39 -0.9
2,465,527 - MPMX20_02340 0.39 +1.1
2,465,527 - MPMX20_02340 0.39 -0.7
2,465,543 - MPMX20_02340 0.39 -1.7
2,465,649 - MPMX20_02340 0.45 -2.3
2,465,727 - MPMX20_02340 0.48 +0.2
2,465,727 - MPMX20_02340 0.48 +0.3

Or see this region's nucleotide sequence