Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02106

Experiment: D-Tagatose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02104 and MPMX20_02105 are separated by 36 nucleotidesMPMX20_02105 and MPMX20_02106 are separated by 310 nucleotidesMPMX20_02106 and MPMX20_02107 are separated by 379 nucleotidesMPMX20_02107 and MPMX20_02108 are separated by 2 nucleotides MPMX20_02104: MPMX20_02104 - hypothetical protein, at 2,199,401 to 2,199,811 _02104 MPMX20_02105: MPMX20_02105 - hypothetical protein, at 2,199,848 to 2,199,952 _02105 MPMX20_02106: MPMX20_02106 - hypothetical protein, at 2,200,263 to 2,200,574 _02106 MPMX20_02107: MPMX20_02107 - hypothetical protein, at 2,200,954 to 2,201,283 _02107 MPMX20_02108: MPMX20_02108 - hypothetical protein, at 2,201,286 to 2,201,951 _02108 Position (kb) 2200 2201Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 2199.318 kb on + strandat 2199.318 kb on + strandat 2199.321 kb on - strandat 2199.326 kb on - strandat 2199.326 kb on - strandat 2199.326 kb on - strandat 2199.326 kb on - strandat 2199.335 kb on + strandat 2199.352 kb on + strandat 2199.352 kb on + strandat 2199.360 kb on - strandat 2199.360 kb on - strandat 2199.362 kb on - strandat 2199.399 kb on - strandat 2199.441 kb on - strandat 2199.458 kb on - strand, within MPMX20_02104at 2199.470 kb on + strand, within MPMX20_02104at 2199.484 kb on + strand, within MPMX20_02104at 2199.484 kb on + strand, within MPMX20_02104at 2199.529 kb on + strand, within MPMX20_02104at 2199.546 kb on + strand, within MPMX20_02104at 2199.564 kb on - strand, within MPMX20_02104at 2199.569 kb on + strand, within MPMX20_02104at 2199.577 kb on - strand, within MPMX20_02104at 2199.598 kb on - strand, within MPMX20_02104at 2199.608 kb on - strand, within MPMX20_02104at 2199.636 kb on - strand, within MPMX20_02104at 2199.653 kb on - strand, within MPMX20_02104at 2199.666 kb on + strand, within MPMX20_02104at 2199.680 kb on + strand, within MPMX20_02104at 2199.724 kb on - strand, within MPMX20_02104at 2199.726 kb on + strand, within MPMX20_02104at 2199.726 kb on + strand, within MPMX20_02104at 2199.726 kb on + strand, within MPMX20_02104at 2199.734 kb on - strand, within MPMX20_02104at 2199.734 kb on - strand, within MPMX20_02104at 2199.734 kb on - strand, within MPMX20_02104at 2199.877 kb on + strand, within MPMX20_02105at 2199.972 kb on + strandat 2199.978 kb on + strandat 2199.978 kb on + strandat 2199.978 kb on + strandat 2199.978 kb on + strandat 2199.978 kb on + strandat 2199.978 kb on + strandat 2199.978 kb on + strandat 2199.978 kb on + strandat 2199.978 kb on + strandat 2199.978 kb on + strandat 2199.980 kb on - strandat 2199.980 kb on - strandat 2199.986 kb on - strandat 2199.986 kb on - strandat 2199.986 kb on - strandat 2199.986 kb on - strandat 2199.986 kb on - strandat 2199.986 kb on - strandat 2199.988 kb on + strandat 2199.996 kb on - strandat 2199.996 kb on - strandat 2200.006 kb on - strandat 2200.011 kb on + strandat 2200.019 kb on - strandat 2200.044 kb on + strandat 2200.050 kb on - strandat 2200.052 kb on - strandat 2200.052 kb on - strandat 2200.052 kb on - strandat 2200.052 kb on - strandat 2200.052 kb on - strandat 2200.052 kb on - strandat 2200.057 kb on - strandat 2200.074 kb on - strandat 2200.074 kb on - strandat 2200.084 kb on - strandat 2200.086 kb on + strandat 2200.086 kb on + strandat 2200.086 kb on + strandat 2200.094 kb on - strandat 2200.122 kb on - strandat 2200.160 kb on + strandat 2200.160 kb on + strandat 2200.160 kb on + strandat 2200.160 kb on + strandat 2200.160 kb on + strandat 2200.160 kb on + strandat 2200.168 kb on - strandat 2200.168 kb on - strandat 2200.168 kb on - strandat 2200.169 kb on - strandat 2200.200 kb on + strandat 2200.200 kb on + strandat 2200.200 kb on + strandat 2200.244 kb on - strandat 2200.249 kb on - strandat 2200.254 kb on - strandat 2200.261 kb on + strandat 2200.261 kb on + strandat 2200.261 kb on + strandat 2200.261 kb on + strandat 2200.261 kb on + strandat 2200.269 kb on - strandat 2200.269 kb on - strandat 2200.269 kb on - strandat 2200.269 kb on - strandat 2200.269 kb on - strandat 2200.274 kb on - strandat 2200.277 kb on - strandat 2200.279 kb on - strandat 2200.353 kb on + strand, within MPMX20_02106at 2200.353 kb on + strand, within MPMX20_02106at 2200.361 kb on - strand, within MPMX20_02106at 2200.378 kb on - strand, within MPMX20_02106at 2200.420 kb on - strand, within MPMX20_02106at 2200.422 kb on + strand, within MPMX20_02106at 2200.422 kb on + strand, within MPMX20_02106at 2200.422 kb on + strand, within MPMX20_02106at 2200.425 kb on - strand, within MPMX20_02106at 2200.425 kb on - strand, within MPMX20_02106at 2200.425 kb on - strand, within MPMX20_02106at 2200.436 kb on + strand, within MPMX20_02106at 2200.438 kb on + strand, within MPMX20_02106at 2200.438 kb on + strand, within MPMX20_02106at 2200.438 kb on + strand, within MPMX20_02106at 2200.453 kb on + strand, within MPMX20_02106at 2200.455 kb on + strand, within MPMX20_02106at 2200.465 kb on + strand, within MPMX20_02106at 2200.470 kb on + strand, within MPMX20_02106at 2200.472 kb on + strand, within MPMX20_02106at 2200.535 kb on + strand, within MPMX20_02106at 2200.645 kb on - strandat 2200.728 kb on - strandat 2200.728 kb on - strandat 2200.747 kb on - strandat 2200.751 kb on - strandat 2200.754 kb on - strandat 2200.754 kb on - strandat 2200.754 kb on - strandat 2200.754 kb on - strandat 2200.754 kb on - strandat 2200.761 kb on - strandat 2200.761 kb on - strandat 2200.761 kb on - strandat 2200.768 kb on - strandat 2200.770 kb on - strandat 2200.788 kb on - strandat 2200.788 kb on - strandat 2200.788 kb on - strandat 2200.788 kb on - strandat 2200.788 kb on - strandat 2200.812 kb on - strandat 2200.839 kb on - strandat 2200.839 kb on - strandat 2200.879 kb on - strandat 2200.887 kb on - strandat 2200.905 kb on - strandat 2200.905 kb on - strandat 2200.906 kb on - strandat 2200.906 kb on - strandat 2200.906 kb on - strandat 2200.906 kb on - strandat 2200.906 kb on - strandat 2200.906 kb on - strandat 2200.906 kb on - strandat 2200.912 kb on + strandat 2200.920 kb on - strandat 2200.923 kb on - strandat 2201.043 kb on - strand, within MPMX20_02107at 2201.043 kb on - strand, within MPMX20_02107at 2201.060 kb on - strand, within MPMX20_02107at 2201.060 kb on - strand, within MPMX20_02107at 2201.060 kb on - strand, within MPMX20_02107at 2201.060 kb on - strand, within MPMX20_02107at 2201.060 kb on - strand, within MPMX20_02107at 2201.060 kb on - strand, within MPMX20_02107at 2201.060 kb on - strand, within MPMX20_02107at 2201.060 kb on - strand, within MPMX20_02107at 2201.060 kb on - strand, within MPMX20_02107at 2201.060 kb on - strand, within MPMX20_02107at 2201.060 kb on - strand, within MPMX20_02107at 2201.060 kb on - strand, within MPMX20_02107at 2201.060 kb on - strand, within MPMX20_02107at 2201.060 kb on - strand, within MPMX20_02107at 2201.060 kb on - strand, within MPMX20_02107at 2201.060 kb on - strand, within MPMX20_02107at 2201.060 kb on - strand, within MPMX20_02107at 2201.060 kb on - strand, within MPMX20_02107at 2201.065 kb on - strand, within MPMX20_02107at 2201.067 kb on + strand, within MPMX20_02107at 2201.067 kb on + strand, within MPMX20_02107at 2201.070 kb on - strand, within MPMX20_02107at 2201.080 kb on + strand, within MPMX20_02107at 2201.088 kb on - strand, within MPMX20_02107at 2201.088 kb on - strand, within MPMX20_02107at 2201.095 kb on + strand, within MPMX20_02107at 2201.097 kb on + strand, within MPMX20_02107at 2201.097 kb on + strand, within MPMX20_02107at 2201.097 kb on + strand, within MPMX20_02107at 2201.097 kb on + strand, within MPMX20_02107at 2201.103 kb on - strand, within MPMX20_02107at 2201.105 kb on + strand, within MPMX20_02107at 2201.105 kb on - strand, within MPMX20_02107at 2201.105 kb on - strand, within MPMX20_02107at 2201.105 kb on - strand, within MPMX20_02107at 2201.105 kb on - strand, within MPMX20_02107at 2201.105 kb on - strand, within MPMX20_02107at 2201.105 kb on - strand, within MPMX20_02107at 2201.105 kb on - strand, within MPMX20_02107at 2201.105 kb on - strand, within MPMX20_02107at 2201.105 kb on - strand, within MPMX20_02107at 2201.105 kb on - strand, within MPMX20_02107at 2201.105 kb on - strand, within MPMX20_02107at 2201.130 kb on - strand, within MPMX20_02107at 2201.176 kb on + strand, within MPMX20_02107at 2201.193 kb on + strand, within MPMX20_02107at 2201.193 kb on + strand, within MPMX20_02107at 2201.196 kb on - strand, within MPMX20_02107at 2201.216 kb on + strand, within MPMX20_02107at 2201.218 kb on + strand, within MPMX20_02107at 2201.218 kb on + strand, within MPMX20_02107at 2201.218 kb on + strand, within MPMX20_02107at 2201.218 kb on + strand, within MPMX20_02107at 2201.218 kb on + strand, within MPMX20_02107at 2201.224 kb on - strand, within MPMX20_02107at 2201.224 kb on - strand, within MPMX20_02107at 2201.224 kb on - strand, within MPMX20_02107at 2201.226 kb on - strand, within MPMX20_02107at 2201.226 kb on - strand, within MPMX20_02107at 2201.226 kb on - strand, within MPMX20_02107at 2201.244 kb on - strand, within MPMX20_02107at 2201.264 kb on + strandat 2201.327 kb on - strandat 2201.328 kb on - strandat 2201.361 kb on - strand, within MPMX20_02108at 2201.361 kb on - strand, within MPMX20_02108at 2201.386 kb on - strand, within MPMX20_02108at 2201.386 kb on - strand, within MPMX20_02108at 2201.419 kb on - strand, within MPMX20_02108at 2201.419 kb on - strand, within MPMX20_02108at 2201.424 kb on - strand, within MPMX20_02108at 2201.429 kb on - strand, within MPMX20_02108at 2201.451 kb on - strand, within MPMX20_02108at 2201.497 kb on - strand, within MPMX20_02108at 2201.498 kb on - strand, within MPMX20_02108at 2201.498 kb on - strand, within MPMX20_02108at 2201.505 kb on - strand, within MPMX20_02108at 2201.544 kb on - strand, within MPMX20_02108at 2201.571 kb on + strand, within MPMX20_02108at 2201.571 kb on + strand, within MPMX20_02108at 2201.571 kb on + strand, within MPMX20_02108at 2201.571 kb on + strand, within MPMX20_02108

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Tagatose (C)
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2,199,318 + -2.3
2,199,318 + -2.3
2,199,321 - +1.9
2,199,326 - +0.5
2,199,326 - -1.6
2,199,326 - -1.2
2,199,326 - -1.6
2,199,335 + -0.1
2,199,352 + +0.1
2,199,352 + +0.5
2,199,360 - +0.0
2,199,360 - +0.1
2,199,362 - +1.3
2,199,399 - -1.5
2,199,441 - +0.5
2,199,458 - MPMX20_02104 0.14 -2.2
2,199,470 + MPMX20_02104 0.17 +0.3
2,199,484 + MPMX20_02104 0.20 -1.6
2,199,484 + MPMX20_02104 0.20 -2.1
2,199,529 + MPMX20_02104 0.31 -0.5
2,199,546 + MPMX20_02104 0.35 +0.4
2,199,564 - MPMX20_02104 0.40 +1.0
2,199,569 + MPMX20_02104 0.41 -1.9
2,199,577 - MPMX20_02104 0.43 -0.2
2,199,598 - MPMX20_02104 0.48 -3.0
2,199,608 - MPMX20_02104 0.50 -0.3
2,199,636 - MPMX20_02104 0.57 -0.4
2,199,653 - MPMX20_02104 0.61 +2.8
2,199,666 + MPMX20_02104 0.64 -3.2
2,199,680 + MPMX20_02104 0.68 +0.4
2,199,724 - MPMX20_02104 0.79 -0.5
2,199,726 + MPMX20_02104 0.79 +0.7
2,199,726 + MPMX20_02104 0.79 -1.5
2,199,726 + MPMX20_02104 0.79 -0.6
2,199,734 - MPMX20_02104 0.81 -3.9
2,199,734 - MPMX20_02104 0.81 -0.7
2,199,734 - MPMX20_02104 0.81 -2.5
2,199,877 + MPMX20_02105 0.28 -2.7
2,199,972 + -0.0
2,199,978 + +1.1
2,199,978 + -0.2
2,199,978 + -2.4
2,199,978 + -0.8
2,199,978 + -1.1
2,199,978 + +0.0
2,199,978 + +0.5
2,199,978 + -1.1
2,199,978 + +0.0
2,199,978 + +0.3
2,199,980 - +0.5
2,199,980 - -0.2
2,199,986 - -3.3
2,199,986 - +0.7
2,199,986 - -1.9
2,199,986 - +0.7
2,199,986 - -2.6
2,199,986 - +0.7
2,199,988 + -2.9
2,199,996 - -2.8
2,199,996 - -3.5
2,200,006 - -0.1
2,200,011 + +0.9
2,200,019 - +0.5
2,200,044 + -1.8
2,200,050 - +2.0
2,200,052 - -2.9
2,200,052 - -0.3
2,200,052 - -1.1
2,200,052 - -0.7
2,200,052 - +0.2
2,200,052 - +1.1
2,200,057 - -1.8
2,200,074 - -0.3
2,200,074 - -0.3
2,200,084 - -2.1
2,200,086 + +0.8
2,200,086 + -0.4
2,200,086 + +0.3
2,200,094 - +1.4
2,200,122 - +0.6
2,200,160 + -2.6
2,200,160 + -1.5
2,200,160 + -3.0
2,200,160 + -2.2
2,200,160 + -2.2
2,200,160 + -2.2
2,200,168 - -0.8
2,200,168 - +0.9
2,200,168 - -3.3
2,200,169 - -0.2
2,200,200 + -0.8
2,200,200 + +1.3
2,200,200 + -0.8
2,200,244 - -2.1
2,200,249 - +1.3
2,200,254 - -2.7
2,200,261 + -1.9
2,200,261 + +0.0
2,200,261 + -0.8
2,200,261 + +1.5
2,200,261 + -0.1
2,200,269 - -2.4
2,200,269 - +0.5
2,200,269 - -1.6
2,200,269 - +0.5
2,200,269 - -1.8
2,200,274 - -2.5
2,200,277 - -2.8
2,200,279 - -2.4
2,200,353 + MPMX20_02106 0.29 +0.5
2,200,353 + MPMX20_02106 0.29 -3.0
2,200,361 - MPMX20_02106 0.31 -1.6
2,200,378 - MPMX20_02106 0.37 -2.6
2,200,420 - MPMX20_02106 0.50 -2.9
2,200,422 + MPMX20_02106 0.51 -2.3
2,200,422 + MPMX20_02106 0.51 -2.8
2,200,422 + MPMX20_02106 0.51 +1.5
2,200,425 - MPMX20_02106 0.52 -1.5
2,200,425 - MPMX20_02106 0.52 -2.4
2,200,425 - MPMX20_02106 0.52 -2.8
2,200,436 + MPMX20_02106 0.55 -2.9
2,200,438 + MPMX20_02106 0.56 +2.0
2,200,438 + MPMX20_02106 0.56 -1.8
2,200,438 + MPMX20_02106 0.56 +0.8
2,200,453 + MPMX20_02106 0.61 -1.2
2,200,455 + MPMX20_02106 0.62 +0.0
2,200,465 + MPMX20_02106 0.65 -1.9
2,200,470 + MPMX20_02106 0.66 -0.5
2,200,472 + MPMX20_02106 0.67 +0.9
2,200,535 + MPMX20_02106 0.87 -2.3
2,200,645 - +1.5
2,200,728 - -0.1
2,200,728 - +0.1
2,200,747 - -2.2
2,200,751 - +0.6
2,200,754 - -0.6
2,200,754 - -1.3
2,200,754 - -2.6
2,200,754 - +1.3
2,200,754 - +1.4
2,200,761 - -1.5
2,200,761 - +2.8
2,200,761 - +2.7
2,200,768 - -0.5
2,200,770 - -1.1
2,200,788 - -0.8
2,200,788 - +1.5
2,200,788 - -0.1
2,200,788 - -2.2
2,200,788 - -3.1
2,200,812 - +0.4
2,200,839 - -2.3
2,200,839 - +0.2
2,200,879 - -3.1
2,200,887 - +3.7
2,200,905 - +0.9
2,200,905 - -2.2
2,200,906 - -1.9
2,200,906 - -1.8
2,200,906 - +0.4
2,200,906 - +2.7
2,200,906 - -0.2
2,200,906 - -1.1
2,200,906 - -2.5
2,200,912 + -2.9
2,200,920 - -1.2
2,200,923 - -1.8
2,201,043 - MPMX20_02107 0.27 -0.1
2,201,043 - MPMX20_02107 0.27 -3.1
2,201,060 - MPMX20_02107 0.32 +0.5
2,201,060 - MPMX20_02107 0.32 +1.5
2,201,060 - MPMX20_02107 0.32 +2.1
2,201,060 - MPMX20_02107 0.32 -0.6
2,201,060 - MPMX20_02107 0.32 +1.1
2,201,060 - MPMX20_02107 0.32 +1.4
2,201,060 - MPMX20_02107 0.32 -0.4
2,201,060 - MPMX20_02107 0.32 -0.5
2,201,060 - MPMX20_02107 0.32 +1.2
2,201,060 - MPMX20_02107 0.32 +0.8
2,201,060 - MPMX20_02107 0.32 -0.9
2,201,060 - MPMX20_02107 0.32 -3.0
2,201,060 - MPMX20_02107 0.32 -2.9
2,201,060 - MPMX20_02107 0.32 -0.2
2,201,060 - MPMX20_02107 0.32 +0.7
2,201,060 - MPMX20_02107 0.32 -2.2
2,201,060 - MPMX20_02107 0.32 +0.8
2,201,060 - MPMX20_02107 0.32 -0.6
2,201,065 - MPMX20_02107 0.34 -2.2
2,201,067 + MPMX20_02107 0.34 -0.5
2,201,067 + MPMX20_02107 0.34 -1.8
2,201,070 - MPMX20_02107 0.35 +0.4
2,201,080 + MPMX20_02107 0.38 -1.8
2,201,088 - MPMX20_02107 0.41 -0.9
2,201,088 - MPMX20_02107 0.41 +0.7
2,201,095 + MPMX20_02107 0.43 -0.1
2,201,097 + MPMX20_02107 0.43 -0.8
2,201,097 + MPMX20_02107 0.43 +1.8
2,201,097 + MPMX20_02107 0.43 -1.1
2,201,097 + MPMX20_02107 0.43 -0.5
2,201,103 - MPMX20_02107 0.45 -0.5
2,201,105 + MPMX20_02107 0.46 +1.0
2,201,105 - MPMX20_02107 0.46 -2.4
2,201,105 - MPMX20_02107 0.46 -2.6
2,201,105 - MPMX20_02107 0.46 +1.7
2,201,105 - MPMX20_02107 0.46 -0.8
2,201,105 - MPMX20_02107 0.46 -3.0
2,201,105 - MPMX20_02107 0.46 -2.3
2,201,105 - MPMX20_02107 0.46 +2.7
2,201,105 - MPMX20_02107 0.46 +0.7
2,201,105 - MPMX20_02107 0.46 +1.0
2,201,105 - MPMX20_02107 0.46 +0.4
2,201,105 - MPMX20_02107 0.46 -2.6
2,201,130 - MPMX20_02107 0.53 +0.8
2,201,176 + MPMX20_02107 0.67 +1.5
2,201,193 + MPMX20_02107 0.72 -3.3
2,201,193 + MPMX20_02107 0.72 +0.9
2,201,196 - MPMX20_02107 0.73 -1.6
2,201,216 + MPMX20_02107 0.79 -1.7
2,201,218 + MPMX20_02107 0.80 -1.6
2,201,218 + MPMX20_02107 0.80 -1.2
2,201,218 + MPMX20_02107 0.80 -1.7
2,201,218 + MPMX20_02107 0.80 -2.3
2,201,218 + MPMX20_02107 0.80 +0.7
2,201,224 - MPMX20_02107 0.82 -1.1
2,201,224 - MPMX20_02107 0.82 -3.9
2,201,224 - MPMX20_02107 0.82 -0.1
2,201,226 - MPMX20_02107 0.82 -1.5
2,201,226 - MPMX20_02107 0.82 -1.3
2,201,226 - MPMX20_02107 0.82 +0.8
2,201,244 - MPMX20_02107 0.88 -2.3
2,201,264 + -0.2
2,201,327 - -1.6
2,201,328 - -1.5
2,201,361 - MPMX20_02108 0.11 -0.1
2,201,361 - MPMX20_02108 0.11 +0.2
2,201,386 - MPMX20_02108 0.15 +0.1
2,201,386 - MPMX20_02108 0.15 +2.8
2,201,419 - MPMX20_02108 0.20 +1.5
2,201,419 - MPMX20_02108 0.20 -2.3
2,201,424 - MPMX20_02108 0.21 +1.0
2,201,429 - MPMX20_02108 0.21 +1.2
2,201,451 - MPMX20_02108 0.25 +1.5
2,201,497 - MPMX20_02108 0.32 +2.5
2,201,498 - MPMX20_02108 0.32 +0.6
2,201,498 - MPMX20_02108 0.32 -0.8
2,201,505 - MPMX20_02108 0.33 -1.4
2,201,544 - MPMX20_02108 0.39 -1.8
2,201,571 + MPMX20_02108 0.43 -2.7
2,201,571 + MPMX20_02108 0.43 -1.1
2,201,571 + MPMX20_02108 0.43 -1.5
2,201,571 + MPMX20_02108 0.43 +0.5

Or see this region's nucleotide sequence