Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01974

Experiment: D-Tagatose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01973 and MPMX20_01974 are separated by 237 nucleotidesMPMX20_01974 and MPMX20_01975 are separated by 28 nucleotides MPMX20_01973: MPMX20_01973 - Multidrug resistance protein MdtK, at 2,063,952 to 2,065,313 _01973 MPMX20_01974: MPMX20_01974 - Riboflavin synthase, at 2,065,551 to 2,066,192 _01974 MPMX20_01975: MPMX20_01975 - Cyclopropane-fatty-acyl-phospholipid synthase, at 2,066,221 to 2,067,369 _01975 Position (kb) 2065 2066 2067Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 2064.607 kb on - strand, within MPMX20_01973at 2064.692 kb on + strand, within MPMX20_01973at 2064.706 kb on - strand, within MPMX20_01973at 2064.835 kb on - strand, within MPMX20_01973at 2064.878 kb on + strand, within MPMX20_01973at 2064.906 kb on + strand, within MPMX20_01973at 2064.914 kb on - strand, within MPMX20_01973at 2064.916 kb on + strand, within MPMX20_01973at 2064.924 kb on - strand, within MPMX20_01973at 2064.924 kb on - strand, within MPMX20_01973at 2064.924 kb on - strand, within MPMX20_01973at 2064.947 kb on - strand, within MPMX20_01973at 2064.947 kb on - strand, within MPMX20_01973at 2064.995 kb on - strand, within MPMX20_01973at 2065.015 kb on + strand, within MPMX20_01973at 2065.018 kb on - strand, within MPMX20_01973at 2065.023 kb on - strand, within MPMX20_01973at 2065.096 kb on - strand, within MPMX20_01973at 2065.175 kb on - strand, within MPMX20_01973at 2065.220 kb on + strandat 2065.228 kb on - strandat 2065.234 kb on + strandat 2065.269 kb on + strandat 2065.276 kb on + strandat 2065.276 kb on + strandat 2065.276 kb on + strandat 2065.276 kb on + strandat 2065.276 kb on + strandat 2065.276 kb on + strandat 2065.276 kb on + strandat 2065.276 kb on + strandat 2065.276 kb on + strandat 2065.276 kb on + strandat 2065.277 kb on - strandat 2065.284 kb on - strandat 2065.284 kb on - strandat 2065.284 kb on - strandat 2065.289 kb on - strandat 2065.333 kb on + strandat 2065.371 kb on + strandat 2065.478 kb on + strandat 2066.126 kb on + strand, within MPMX20_01974at 2066.126 kb on + strand, within MPMX20_01974at 2066.134 kb on - strandat 2066.134 kb on - strandat 2066.136 kb on + strandat 2066.252 kb on - strandat 2066.252 kb on - strandat 2066.257 kb on + strandat 2066.265 kb on - strandat 2066.277 kb on + strandat 2066.300 kb on - strandat 2066.304 kb on - strandat 2066.336 kb on + strand, within MPMX20_01975at 2066.336 kb on + strand, within MPMX20_01975at 2066.336 kb on + strand, within MPMX20_01975at 2066.351 kb on + strand, within MPMX20_01975at 2066.351 kb on + strand, within MPMX20_01975at 2066.359 kb on - strand, within MPMX20_01975at 2066.359 kb on - strand, within MPMX20_01975at 2066.359 kb on - strand, within MPMX20_01975at 2066.359 kb on - strand, within MPMX20_01975at 2066.359 kb on - strand, within MPMX20_01975at 2066.359 kb on - strand, within MPMX20_01975at 2066.359 kb on - strand, within MPMX20_01975at 2066.359 kb on - strand, within MPMX20_01975at 2066.380 kb on - strand, within MPMX20_01975at 2066.381 kb on + strand, within MPMX20_01975at 2066.398 kb on - strand, within MPMX20_01975at 2066.411 kb on - strand, within MPMX20_01975at 2066.416 kb on + strand, within MPMX20_01975at 2066.416 kb on + strand, within MPMX20_01975at 2066.416 kb on + strand, within MPMX20_01975at 2066.416 kb on + strand, within MPMX20_01975at 2066.416 kb on + strand, within MPMX20_01975at 2066.416 kb on + strand, within MPMX20_01975at 2066.416 kb on + strand, within MPMX20_01975at 2066.416 kb on + strand, within MPMX20_01975at 2066.424 kb on - strand, within MPMX20_01975at 2066.424 kb on - strand, within MPMX20_01975at 2066.424 kb on - strand, within MPMX20_01975at 2066.424 kb on - strand, within MPMX20_01975at 2066.424 kb on - strand, within MPMX20_01975at 2066.424 kb on - strand, within MPMX20_01975at 2066.424 kb on - strand, within MPMX20_01975at 2066.463 kb on + strand, within MPMX20_01975at 2066.465 kb on + strand, within MPMX20_01975at 2066.465 kb on + strand, within MPMX20_01975at 2066.496 kb on + strand, within MPMX20_01975at 2066.504 kb on - strand, within MPMX20_01975at 2066.556 kb on + strand, within MPMX20_01975at 2066.562 kb on + strand, within MPMX20_01975at 2066.564 kb on - strand, within MPMX20_01975at 2066.564 kb on - strand, within MPMX20_01975at 2066.570 kb on - strand, within MPMX20_01975at 2066.570 kb on - strand, within MPMX20_01975at 2066.572 kb on - strand, within MPMX20_01975at 2066.585 kb on - strand, within MPMX20_01975at 2066.608 kb on - strand, within MPMX20_01975at 2066.610 kb on + strand, within MPMX20_01975at 2066.618 kb on - strand, within MPMX20_01975at 2066.691 kb on + strand, within MPMX20_01975at 2066.702 kb on + strand, within MPMX20_01975at 2066.710 kb on - strand, within MPMX20_01975at 2066.801 kb on + strand, within MPMX20_01975at 2066.801 kb on + strand, within MPMX20_01975at 2066.801 kb on + strand, within MPMX20_01975at 2066.809 kb on - strand, within MPMX20_01975at 2066.809 kb on - strand, within MPMX20_01975at 2066.837 kb on - strand, within MPMX20_01975at 2066.838 kb on + strand, within MPMX20_01975at 2066.846 kb on - strand, within MPMX20_01975at 2066.879 kb on - strand, within MPMX20_01975at 2066.904 kb on + strand, within MPMX20_01975at 2066.928 kb on + strand, within MPMX20_01975at 2066.929 kb on + strand, within MPMX20_01975at 2066.938 kb on - strand, within MPMX20_01975at 2066.948 kb on - strand, within MPMX20_01975at 2066.979 kb on + strand, within MPMX20_01975at 2066.984 kb on + strand, within MPMX20_01975at 2066.984 kb on + strand, within MPMX20_01975at 2066.992 kb on - strand, within MPMX20_01975at 2066.994 kb on + strand, within MPMX20_01975at 2066.994 kb on + strand, within MPMX20_01975at 2066.994 kb on - strand, within MPMX20_01975at 2067.002 kb on - strand, within MPMX20_01975at 2067.002 kb on - strand, within MPMX20_01975at 2067.168 kb on + strand, within MPMX20_01975at 2067.168 kb on + strand, within MPMX20_01975at 2067.176 kb on - strand, within MPMX20_01975at 2067.192 kb on + strand, within MPMX20_01975

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Tagatose (C)
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2,064,607 - MPMX20_01973 0.48 -0.1
2,064,692 + MPMX20_01973 0.54 -2.3
2,064,706 - MPMX20_01973 0.55 +2.7
2,064,835 - MPMX20_01973 0.65 +0.1
2,064,878 + MPMX20_01973 0.68 -3.1
2,064,906 + MPMX20_01973 0.70 +1.6
2,064,914 - MPMX20_01973 0.71 -2.2
2,064,916 + MPMX20_01973 0.71 +3.4
2,064,924 - MPMX20_01973 0.71 +0.6
2,064,924 - MPMX20_01973 0.71 +0.3
2,064,924 - MPMX20_01973 0.71 -0.4
2,064,947 - MPMX20_01973 0.73 -0.5
2,064,947 - MPMX20_01973 0.73 +0.4
2,064,995 - MPMX20_01973 0.77 -0.6
2,065,015 + MPMX20_01973 0.78 +1.0
2,065,018 - MPMX20_01973 0.78 +1.8
2,065,023 - MPMX20_01973 0.79 -0.7
2,065,096 - MPMX20_01973 0.84 +0.0
2,065,175 - MPMX20_01973 0.90 +0.1
2,065,220 + +0.7
2,065,228 - -2.1
2,065,234 + +2.3
2,065,269 + -0.2
2,065,276 + +1.6
2,065,276 + -1.2
2,065,276 + -0.9
2,065,276 + +2.1
2,065,276 + +0.4
2,065,276 + +0.9
2,065,276 + -2.8
2,065,276 + +0.8
2,065,276 + +1.4
2,065,276 + +0.3
2,065,277 - -2.1
2,065,284 - +3.0
2,065,284 - -1.2
2,065,284 - -3.4
2,065,289 - -0.7
2,065,333 + +0.3
2,065,371 + -0.8
2,065,478 + -2.7
2,066,126 + MPMX20_01974 0.90 +0.2
2,066,126 + MPMX20_01974 0.90 -0.4
2,066,134 - -1.6
2,066,134 - -3.1
2,066,136 + -1.8
2,066,252 - -0.5
2,066,252 - -2.6
2,066,257 + +0.0
2,066,265 - -1.4
2,066,277 + +0.1
2,066,300 - +1.0
2,066,304 - +0.4
2,066,336 + MPMX20_01975 0.10 -0.2
2,066,336 + MPMX20_01975 0.10 -1.9
2,066,336 + MPMX20_01975 0.10 -1.0
2,066,351 + MPMX20_01975 0.11 -1.6
2,066,351 + MPMX20_01975 0.11 -0.7
2,066,359 - MPMX20_01975 0.12 +0.7
2,066,359 - MPMX20_01975 0.12 -3.3
2,066,359 - MPMX20_01975 0.12 -2.5
2,066,359 - MPMX20_01975 0.12 -1.0
2,066,359 - MPMX20_01975 0.12 -4.1
2,066,359 - MPMX20_01975 0.12 +1.7
2,066,359 - MPMX20_01975 0.12 +0.1
2,066,359 - MPMX20_01975 0.12 +2.2
2,066,380 - MPMX20_01975 0.14 +0.8
2,066,381 + MPMX20_01975 0.14 -0.8
2,066,398 - MPMX20_01975 0.15 +1.0
2,066,411 - MPMX20_01975 0.17 -0.7
2,066,416 + MPMX20_01975 0.17 +0.1
2,066,416 + MPMX20_01975 0.17 +0.8
2,066,416 + MPMX20_01975 0.17 -2.9
2,066,416 + MPMX20_01975 0.17 -2.5
2,066,416 + MPMX20_01975 0.17 +0.9
2,066,416 + MPMX20_01975 0.17 -1.5
2,066,416 + MPMX20_01975 0.17 -1.7
2,066,416 + MPMX20_01975 0.17 -1.1
2,066,424 - MPMX20_01975 0.18 +0.0
2,066,424 - MPMX20_01975 0.18 -1.8
2,066,424 - MPMX20_01975 0.18 -2.8
2,066,424 - MPMX20_01975 0.18 -0.5
2,066,424 - MPMX20_01975 0.18 -3.2
2,066,424 - MPMX20_01975 0.18 +0.7
2,066,424 - MPMX20_01975 0.18 +1.6
2,066,463 + MPMX20_01975 0.21 -1.6
2,066,465 + MPMX20_01975 0.21 -1.4
2,066,465 + MPMX20_01975 0.21 -2.1
2,066,496 + MPMX20_01975 0.24 +2.6
2,066,504 - MPMX20_01975 0.25 -0.4
2,066,556 + MPMX20_01975 0.29 -2.8
2,066,562 + MPMX20_01975 0.30 +0.1
2,066,564 - MPMX20_01975 0.30 -2.4
2,066,564 - MPMX20_01975 0.30 +0.4
2,066,570 - MPMX20_01975 0.30 +0.7
2,066,570 - MPMX20_01975 0.30 +0.5
2,066,572 - MPMX20_01975 0.31 +0.9
2,066,585 - MPMX20_01975 0.32 -1.9
2,066,608 - MPMX20_01975 0.34 +1.0
2,066,610 + MPMX20_01975 0.34 -0.1
2,066,618 - MPMX20_01975 0.35 +2.8
2,066,691 + MPMX20_01975 0.41 +0.9
2,066,702 + MPMX20_01975 0.42 +0.5
2,066,710 - MPMX20_01975 0.43 -2.4
2,066,801 + MPMX20_01975 0.50 -2.3
2,066,801 + MPMX20_01975 0.50 +0.7
2,066,801 + MPMX20_01975 0.50 -0.1
2,066,809 - MPMX20_01975 0.51 +0.9
2,066,809 - MPMX20_01975 0.51 +0.1
2,066,837 - MPMX20_01975 0.54 +0.0
2,066,838 + MPMX20_01975 0.54 -0.7
2,066,846 - MPMX20_01975 0.54 -3.2
2,066,879 - MPMX20_01975 0.57 -0.9
2,066,904 + MPMX20_01975 0.59 -0.7
2,066,928 + MPMX20_01975 0.62 +0.0
2,066,929 + MPMX20_01975 0.62 +0.0
2,066,938 - MPMX20_01975 0.62 -0.4
2,066,948 - MPMX20_01975 0.63 +0.2
2,066,979 + MPMX20_01975 0.66 +1.6
2,066,984 + MPMX20_01975 0.66 +2.3
2,066,984 + MPMX20_01975 0.66 +1.6
2,066,992 - MPMX20_01975 0.67 -1.0
2,066,994 + MPMX20_01975 0.67 -0.5
2,066,994 + MPMX20_01975 0.67 +0.7
2,066,994 - MPMX20_01975 0.67 +0.9
2,067,002 - MPMX20_01975 0.68 -1.2
2,067,002 - MPMX20_01975 0.68 -3.4
2,067,168 + MPMX20_01975 0.82 -1.6
2,067,168 + MPMX20_01975 0.82 +0.5
2,067,176 - MPMX20_01975 0.83 +0.9
2,067,192 + MPMX20_01975 0.85 -2.0

Or see this region's nucleotide sequence