Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04697 and MPMX20_04698 overlap by 4 nucleotides MPMX20_04698 and MPMX20_04699 overlap by 4 nucleotides MPMX20_04699 and MPMX20_04700 are separated by 10 nucleotides
MPMX20_04697: MPMX20_04697 - Mating pair stabilization protein TraN, at 55,733 to 57,562
_04697
MPMX20_04698: MPMX20_04698 - hypothetical protein, at 57,559 to 58,176
_04698
MPMX20_04699: MPMX20_04699 - hypothetical protein, at 58,173 to 58,541
_04699
MPMX20_04700: MPMX20_04700 - hypothetical protein, at 58,552 to 59,547
_04700
Position (kb) 58
59 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 57.195 kb on + strand, within MPMX20_04697 at 57.195 kb on + strand, within MPMX20_04697 at 57.203 kb on - strand, within MPMX20_04697 at 57.247 kb on - strand, within MPMX20_04697 at 57.254 kb on - strand, within MPMX20_04697 at 57.288 kb on - strand, within MPMX20_04697 at 57.306 kb on - strand, within MPMX20_04697 at 57.306 kb on - strand, within MPMX20_04697 at 57.306 kb on - strand, within MPMX20_04697 at 57.311 kb on - strand, within MPMX20_04697 at 57.316 kb on - strand, within MPMX20_04697 at 57.333 kb on + strand, within MPMX20_04697 at 57.333 kb on + strand, within MPMX20_04697 at 57.343 kb on + strand, within MPMX20_04697 at 57.351 kb on - strand, within MPMX20_04697 at 57.353 kb on + strand, within MPMX20_04697 at 57.353 kb on + strand, within MPMX20_04697 at 57.361 kb on - strand, within MPMX20_04697 at 57.379 kb on + strand, within MPMX20_04697 at 57.379 kb on + strand, within MPMX20_04697 at 57.379 kb on + strand, within MPMX20_04697 at 57.387 kb on - strand at 57.387 kb on - strand at 57.425 kb on + strand at 57.436 kb on + strand at 57.443 kb on + strand at 57.444 kb on + strand at 57.459 kb on + strand at 57.459 kb on + strand at 57.459 kb on + strand at 57.459 kb on + strand at 57.459 kb on + strand at 57.467 kb on - strand at 57.467 kb on - strand at 57.467 kb on - strand at 57.467 kb on - strand at 57.467 kb on - strand at 57.546 kb on + strand at 57.570 kb on + strand at 57.570 kb on + strand at 57.570 kb on + strand at 57.586 kb on + strand at 57.610 kb on + strand at 57.635 kb on + strand, within MPMX20_04698 at 57.635 kb on + strand, within MPMX20_04698 at 57.645 kb on + strand, within MPMX20_04698 at 57.645 kb on + strand, within MPMX20_04698 at 57.645 kb on + strand, within MPMX20_04698 at 57.653 kb on - strand, within MPMX20_04698 at 57.653 kb on - strand, within MPMX20_04698 at 57.663 kb on - strand, within MPMX20_04698 at 57.679 kb on + strand, within MPMX20_04698 at 57.692 kb on - strand, within MPMX20_04698 at 57.724 kb on - strand, within MPMX20_04698 at 57.742 kb on + strand, within MPMX20_04698 at 57.767 kb on + strand, within MPMX20_04698 at 57.767 kb on + strand, within MPMX20_04698 at 57.775 kb on - strand, within MPMX20_04698 at 57.797 kb on + strand, within MPMX20_04698 at 57.853 kb on + strand, within MPMX20_04698 at 57.856 kb on - strand, within MPMX20_04698 at 57.866 kb on - strand, within MPMX20_04698 at 57.873 kb on - strand, within MPMX20_04698 at 57.890 kb on - strand, within MPMX20_04698 at 57.890 kb on - strand, within MPMX20_04698 at 57.890 kb on - strand, within MPMX20_04698 at 57.954 kb on + strand, within MPMX20_04698 at 57.970 kb on + strand, within MPMX20_04698 at 57.978 kb on - strand, within MPMX20_04698 at 57.983 kb on - strand, within MPMX20_04698 at 58.020 kb on - strand, within MPMX20_04698 at 58.035 kb on + strand, within MPMX20_04698 at 58.042 kb on + strand, within MPMX20_04698 at 58.043 kb on - strand, within MPMX20_04698 at 58.043 kb on - strand, within MPMX20_04698 at 58.050 kb on - strand, within MPMX20_04698 at 58.050 kb on - strand, within MPMX20_04698 at 58.050 kb on - strand, within MPMX20_04698 at 58.052 kb on + strand, within MPMX20_04698 at 58.073 kb on + strand, within MPMX20_04698 at 58.121 kb on - strand at 58.259 kb on + strand, within MPMX20_04699 at 58.267 kb on - strand, within MPMX20_04699 at 58.288 kb on + strand, within MPMX20_04699 at 58.346 kb on + strand, within MPMX20_04699 at 58.354 kb on - strand, within MPMX20_04699 at 58.366 kb on + strand, within MPMX20_04699 at 58.366 kb on + strand, within MPMX20_04699 at 58.374 kb on - strand, within MPMX20_04699 at 58.374 kb on - strand, within MPMX20_04699 at 58.374 kb on - strand, within MPMX20_04699 at 58.379 kb on - strand, within MPMX20_04699 at 58.418 kb on - strand, within MPMX20_04699 at 58.441 kb on + strand, within MPMX20_04699 at 58.449 kb on - strand, within MPMX20_04699 at 58.458 kb on + strand, within MPMX20_04699 at 58.475 kb on - strand, within MPMX20_04699 at 58.507 kb on + strand at 58.516 kb on - strand at 58.537 kb on + strand at 58.545 kb on - strand at 58.545 kb on - strand at 58.587 kb on - strand at 58.587 kb on - strand at 58.613 kb on + strand at 58.613 kb on + strand at 58.621 kb on - strand at 58.658 kb on + strand, within MPMX20_04700 at 58.658 kb on + strand, within MPMX20_04700 at 58.662 kb on - strand, within MPMX20_04700 at 58.663 kb on + strand, within MPMX20_04700 at 58.663 kb on + strand, within MPMX20_04700 at 58.664 kb on - strand, within MPMX20_04700 at 58.695 kb on + strand, within MPMX20_04700 at 58.719 kb on + strand, within MPMX20_04700 at 58.737 kb on + strand, within MPMX20_04700 at 58.745 kb on - strand, within MPMX20_04700 at 58.745 kb on - strand, within MPMX20_04700 at 58.756 kb on + strand, within MPMX20_04700 at 58.777 kb on + strand, within MPMX20_04700 at 58.797 kb on + strand, within MPMX20_04700 at 58.824 kb on + strand, within MPMX20_04700 at 58.829 kb on - strand, within MPMX20_04700 at 58.831 kb on + strand, within MPMX20_04700 at 58.831 kb on + strand, within MPMX20_04700 at 58.831 kb on + strand, within MPMX20_04700 at 58.831 kb on + strand, within MPMX20_04700 at 58.831 kb on + strand, within MPMX20_04700 at 58.832 kb on - strand, within MPMX20_04700 at 58.832 kb on - strand, within MPMX20_04700 at 58.832 kb on - strand, within MPMX20_04700 at 58.839 kb on - strand, within MPMX20_04700 at 58.839 kb on - strand, within MPMX20_04700 at 58.883 kb on - strand, within MPMX20_04700 at 58.888 kb on - strand, within MPMX20_04700 at 58.901 kb on + strand, within MPMX20_04700 at 58.901 kb on + strand, within MPMX20_04700 at 58.901 kb on + strand, within MPMX20_04700 at 58.901 kb on + strand, within MPMX20_04700 at 58.901 kb on + strand, within MPMX20_04700 at 58.901 kb on + strand, within MPMX20_04700 at 58.901 kb on + strand, within MPMX20_04700 at 58.901 kb on + strand, within MPMX20_04700 at 58.901 kb on + strand, within MPMX20_04700 at 58.901 kb on + strand, within MPMX20_04700 at 58.901 kb on + strand, within MPMX20_04700 at 58.909 kb on - strand, within MPMX20_04700 at 58.909 kb on - strand, within MPMX20_04700 at 58.909 kb on - strand, within MPMX20_04700 at 58.909 kb on - strand, within MPMX20_04700 at 58.909 kb on - strand, within MPMX20_04700 at 58.909 kb on - strand, within MPMX20_04700 at 58.909 kb on - strand, within MPMX20_04700 at 58.909 kb on - strand, within MPMX20_04700 at 58.914 kb on - strand, within MPMX20_04700 at 58.923 kb on + strand, within MPMX20_04700 at 58.958 kb on - strand, within MPMX20_04700 at 58.994 kb on + strand, within MPMX20_04700 at 58.994 kb on + strand, within MPMX20_04700 at 59.002 kb on - strand, within MPMX20_04700 at 59.012 kb on - strand, within MPMX20_04700 at 59.044 kb on - strand, within MPMX20_04700 at 59.063 kb on - strand, within MPMX20_04700 at 59.090 kb on + strand, within MPMX20_04700 at 59.092 kb on - strand, within MPMX20_04700 at 59.097 kb on - strand, within MPMX20_04700 at 59.112 kb on + strand, within MPMX20_04700 at 59.130 kb on + strand, within MPMX20_04700 at 59.137 kb on + strand, within MPMX20_04700 at 59.138 kb on - strand, within MPMX20_04700 at 59.147 kb on + strand, within MPMX20_04700 at 59.147 kb on + strand, within MPMX20_04700 at 59.150 kb on - strand, within MPMX20_04700 at 59.155 kb on - strand, within MPMX20_04700 at 59.210 kb on + strand, within MPMX20_04700 at 59.242 kb on + strand, within MPMX20_04700 at 59.266 kb on + strand, within MPMX20_04700 at 59.266 kb on + strand, within MPMX20_04700 at 59.266 kb on + strand, within MPMX20_04700 at 59.266 kb on + strand, within MPMX20_04700 at 59.269 kb on - strand, within MPMX20_04700 at 59.274 kb on - strand, within MPMX20_04700 at 59.274 kb on - strand, within MPMX20_04700 at 59.274 kb on - strand, within MPMX20_04700 at 59.274 kb on - strand, within MPMX20_04700 at 59.275 kb on + strand, within MPMX20_04700 at 59.291 kb on + strand, within MPMX20_04700 at 59.301 kb on + strand, within MPMX20_04700 at 59.301 kb on + strand, within MPMX20_04700 at 59.304 kb on - strand, within MPMX20_04700 at 59.304 kb on - strand, within MPMX20_04700 at 59.309 kb on - strand, within MPMX20_04700 at 59.309 kb on - strand, within MPMX20_04700 at 59.309 kb on - strand, within MPMX20_04700 at 59.335 kb on - strand, within MPMX20_04700 at 59.335 kb on - strand, within MPMX20_04700 at 59.352 kb on + strand, within MPMX20_04700 at 59.352 kb on + strand, within MPMX20_04700 at 59.352 kb on + strand, within MPMX20_04700 at 59.360 kb on - strand, within MPMX20_04700 at 59.360 kb on - strand, within MPMX20_04700 at 59.360 kb on - strand, within MPMX20_04700 at 59.383 kb on - strand, within MPMX20_04700 at 59.402 kb on - strand, within MPMX20_04700 at 59.489 kb on - strand at 59.517 kb on - strand at 59.517 kb on - strand at 59.521 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 57,195 + MPMX20_04697 0.80 -1.6 57,195 + MPMX20_04697 0.80 +1.0 57,203 - MPMX20_04697 0.80 -0.4 57,247 - MPMX20_04697 0.83 -2.5 57,254 - MPMX20_04697 0.83 -0.0 57,288 - MPMX20_04697 0.85 -1.3 57,306 - MPMX20_04697 0.86 +1.0 57,306 - MPMX20_04697 0.86 +1.5 57,306 - MPMX20_04697 0.86 +0.3 57,311 - MPMX20_04697 0.86 +1.5 57,316 - MPMX20_04697 0.87 -0.7 57,333 + MPMX20_04697 0.87 -0.1 57,333 + MPMX20_04697 0.87 -3.2 57,343 + MPMX20_04697 0.88 -1.1 57,351 - MPMX20_04697 0.88 -2.2 57,353 + MPMX20_04697 0.89 -4.1 57,353 + MPMX20_04697 0.89 -1.8 57,361 - MPMX20_04697 0.89 -1.3 57,379 + MPMX20_04697 0.90 +1.3 57,379 + MPMX20_04697 0.90 -2.9 57,379 + MPMX20_04697 0.90 +3.7 57,387 - -3.1 57,387 - -0.1 57,425 + -4.6 57,436 + +1.9 57,443 + +2.0 57,444 + -3.2 57,459 + -2.7 57,459 + -0.1 57,459 + +1.1 57,459 + +1.8 57,459 + -0.4 57,467 - +4.6 57,467 - -1.4 57,467 - +1.0 57,467 - -2.0 57,467 - -1.3 57,546 + -1.6 57,570 + -2.1 57,570 + +0.3 57,570 + +2.7 57,586 + +1.6 57,610 + -1.8 57,635 + MPMX20_04698 0.12 +0.6 57,635 + MPMX20_04698 0.12 +0.4 57,645 + MPMX20_04698 0.14 -3.6 57,645 + MPMX20_04698 0.14 -1.6 57,645 + MPMX20_04698 0.14 +0.7 57,653 - MPMX20_04698 0.15 +1.0 57,653 - MPMX20_04698 0.15 -1.2 57,663 - MPMX20_04698 0.17 -1.6 57,679 + MPMX20_04698 0.19 +0.2 57,692 - MPMX20_04698 0.22 -1.9 57,724 - MPMX20_04698 0.27 +2.4 57,742 + MPMX20_04698 0.30 +0.3 57,767 + MPMX20_04698 0.34 -2.5 57,767 + MPMX20_04698 0.34 +1.0 57,775 - MPMX20_04698 0.35 -2.0 57,797 + MPMX20_04698 0.39 -1.4 57,853 + MPMX20_04698 0.48 -0.6 57,856 - MPMX20_04698 0.48 +1.6 57,866 - MPMX20_04698 0.50 -0.1 57,873 - MPMX20_04698 0.51 +1.8 57,890 - MPMX20_04698 0.54 -3.2 57,890 - MPMX20_04698 0.54 -0.1 57,890 - MPMX20_04698 0.54 +1.3 57,954 + MPMX20_04698 0.64 +0.8 57,970 + MPMX20_04698 0.67 +3.3 57,978 - MPMX20_04698 0.68 +0.9 57,983 - MPMX20_04698 0.69 -1.4 58,020 - MPMX20_04698 0.75 +1.4 58,035 + MPMX20_04698 0.77 +2.3 58,042 + MPMX20_04698 0.78 +2.8 58,043 - MPMX20_04698 0.78 -0.4 58,043 - MPMX20_04698 0.78 +0.1 58,050 - MPMX20_04698 0.79 -1.6 58,050 - MPMX20_04698 0.79 -2.0 58,050 - MPMX20_04698 0.79 -1.3 58,052 + MPMX20_04698 0.80 -2.2 58,073 + MPMX20_04698 0.83 -2.8 58,121 - -0.1 58,259 + MPMX20_04699 0.23 +1.4 58,267 - MPMX20_04699 0.25 +2.0 58,288 + MPMX20_04699 0.31 +1.8 58,346 + MPMX20_04699 0.47 +0.7 58,354 - MPMX20_04699 0.49 +2.0 58,366 + MPMX20_04699 0.52 -0.3 58,366 + MPMX20_04699 0.52 -0.7 58,374 - MPMX20_04699 0.54 +4.0 58,374 - MPMX20_04699 0.54 +3.1 58,374 - MPMX20_04699 0.54 +0.7 58,379 - MPMX20_04699 0.56 -1.1 58,418 - MPMX20_04699 0.66 +2.1 58,441 + MPMX20_04699 0.73 +0.3 58,449 - MPMX20_04699 0.75 -0.2 58,458 + MPMX20_04699 0.77 -3.0 58,475 - MPMX20_04699 0.82 +2.0 58,507 + +3.1 58,516 - -2.5 58,537 + -0.1 58,545 - -4.7 58,545 - -1.3 58,587 - -1.9 58,587 - -1.1 58,613 + -0.4 58,613 + -0.5 58,621 - -2.8 58,658 + MPMX20_04700 0.11 +0.3 58,658 + MPMX20_04700 0.11 +0.1 58,662 - MPMX20_04700 0.11 +3.9 58,663 + MPMX20_04700 0.11 +1.6 58,663 + MPMX20_04700 0.11 -0.0 58,664 - MPMX20_04700 0.11 -4.7 58,695 + MPMX20_04700 0.14 +0.4 58,719 + MPMX20_04700 0.17 -0.1 58,737 + MPMX20_04700 0.19 -1.6 58,745 - MPMX20_04700 0.19 -3.4 58,745 - MPMX20_04700 0.19 +0.3 58,756 + MPMX20_04700 0.20 -0.7 58,777 + MPMX20_04700 0.23 +1.3 58,797 + MPMX20_04700 0.25 +0.3 58,824 + MPMX20_04700 0.27 -2.3 58,829 - MPMX20_04700 0.28 -4.7 58,831 + MPMX20_04700 0.28 -3.1 58,831 + MPMX20_04700 0.28 -1.1 58,831 + MPMX20_04700 0.28 +0.3 58,831 + MPMX20_04700 0.28 +1.9 58,831 + MPMX20_04700 0.28 -3.0 58,832 - MPMX20_04700 0.28 +0.3 58,832 - MPMX20_04700 0.28 +2.2 58,832 - MPMX20_04700 0.28 -0.1 58,839 - MPMX20_04700 0.29 +0.6 58,839 - MPMX20_04700 0.29 +1.2 58,883 - MPMX20_04700 0.33 -2.3 58,888 - MPMX20_04700 0.34 +0.9 58,901 + MPMX20_04700 0.35 -2.4 58,901 + MPMX20_04700 0.35 +0.0 58,901 + MPMX20_04700 0.35 +2.0 58,901 + MPMX20_04700 0.35 +1.5 58,901 + MPMX20_04700 0.35 -1.7 58,901 + MPMX20_04700 0.35 -1.3 58,901 + MPMX20_04700 0.35 +0.8 58,901 + MPMX20_04700 0.35 -2.2 58,901 + MPMX20_04700 0.35 +2.8 58,901 + MPMX20_04700 0.35 -0.9 58,901 + MPMX20_04700 0.35 -1.4 58,909 - MPMX20_04700 0.36 -2.0 58,909 - MPMX20_04700 0.36 +1.2 58,909 - MPMX20_04700 0.36 -1.8 58,909 - MPMX20_04700 0.36 -0.9 58,909 - MPMX20_04700 0.36 -1.0 58,909 - MPMX20_04700 0.36 -0.7 58,909 - MPMX20_04700 0.36 -1.9 58,909 - MPMX20_04700 0.36 -0.2 58,914 - MPMX20_04700 0.36 +0.1 58,923 + MPMX20_04700 0.37 +2.6 58,958 - MPMX20_04700 0.41 +0.2 58,994 + MPMX20_04700 0.44 -1.6 58,994 + MPMX20_04700 0.44 -0.3 59,002 - MPMX20_04700 0.45 +0.5 59,012 - MPMX20_04700 0.46 +0.7 59,044 - MPMX20_04700 0.49 -1.1 59,063 - MPMX20_04700 0.51 -0.3 59,090 + MPMX20_04700 0.54 +1.3 59,092 - MPMX20_04700 0.54 -0.6 59,097 - MPMX20_04700 0.55 -2.3 59,112 + MPMX20_04700 0.56 -2.2 59,130 + MPMX20_04700 0.58 -1.3 59,137 + MPMX20_04700 0.59 +1.8 59,138 - MPMX20_04700 0.59 -2.1 59,147 + MPMX20_04700 0.60 -2.4 59,147 + MPMX20_04700 0.60 +1.3 59,150 - MPMX20_04700 0.60 -2.4 59,155 - MPMX20_04700 0.61 -2.8 59,210 + MPMX20_04700 0.66 +1.6 59,242 + MPMX20_04700 0.69 +2.2 59,266 + MPMX20_04700 0.72 +0.9 59,266 + MPMX20_04700 0.72 +1.5 59,266 + MPMX20_04700 0.72 -0.7 59,266 + MPMX20_04700 0.72 +1.8 59,269 - MPMX20_04700 0.72 +1.7 59,274 - MPMX20_04700 0.72 -2.3 59,274 - MPMX20_04700 0.72 +1.1 59,274 - MPMX20_04700 0.72 -1.4 59,274 - MPMX20_04700 0.72 +0.7 59,275 + MPMX20_04700 0.73 -1.3 59,291 + MPMX20_04700 0.74 -2.3 59,301 + MPMX20_04700 0.75 -1.6 59,301 + MPMX20_04700 0.75 -1.1 59,304 - MPMX20_04700 0.76 -4.0 59,304 - MPMX20_04700 0.76 +0.9 59,309 - MPMX20_04700 0.76 +1.5 59,309 - MPMX20_04700 0.76 -2.5 59,309 - MPMX20_04700 0.76 -0.7 59,335 - MPMX20_04700 0.79 -1.9 59,335 - MPMX20_04700 0.79 -2.3 59,352 + MPMX20_04700 0.80 +2.5 59,352 + MPMX20_04700 0.80 -2.6 59,352 + MPMX20_04700 0.80 -2.9 59,360 - MPMX20_04700 0.81 +1.7 59,360 - MPMX20_04700 0.81 -2.7 59,360 - MPMX20_04700 0.81 +0.3 59,383 - MPMX20_04700 0.83 +1.0 59,402 - MPMX20_04700 0.85 -2.3 59,489 - +2.6 59,517 - -0.7 59,517 - -3.0 59,521 + +0.9
Or see this region's nucleotide sequence