Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04598 and MPMX20_04599 are separated by 188 nucleotides MPMX20_04599 and MPMX20_04600 are separated by 578 nucleotides
MPMX20_04598: MPMX20_04598 - Oxygen-independent coproporphyrinogen III oxidase, at 4,813,544 to 4,814,917
_04598
MPMX20_04599: MPMX20_04599 - Der GTPase-activating protein YihI, at 4,815,106 to 4,815,621
_04599
MPMX20_04600: MPMX20_04600 - putative GTP-binding protein EngB, at 4,816,200 to 4,816,829
_04600
Position (kb)
4815
4816 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 4814.131 kb on - strand, within MPMX20_04598 at 4814.258 kb on + strand, within MPMX20_04598 at 4814.263 kb on - strand, within MPMX20_04598 at 4814.265 kb on - strand, within MPMX20_04598 at 4814.305 kb on + strand, within MPMX20_04598 at 4814.305 kb on + strand, within MPMX20_04598 at 4814.313 kb on - strand, within MPMX20_04598 at 4814.313 kb on - strand, within MPMX20_04598 at 4814.313 kb on - strand, within MPMX20_04598 at 4814.409 kb on + strand, within MPMX20_04598 at 4814.459 kb on - strand, within MPMX20_04598 at 4814.589 kb on - strand, within MPMX20_04598 at 4814.726 kb on - strand, within MPMX20_04598 at 4814.738 kb on - strand, within MPMX20_04598 at 4814.777 kb on + strand, within MPMX20_04598 at 4814.835 kb on + strand at 4814.846 kb on - strand at 4814.847 kb on - strand at 4814.855 kb on - strand at 4814.908 kb on + strand at 4814.916 kb on - strand at 4814.917 kb on + strand at 4814.931 kb on - strand at 4815.078 kb on + strand at 4815.078 kb on + strand at 4815.176 kb on + strand, within MPMX20_04599 at 4815.176 kb on + strand, within MPMX20_04599 at 4815.184 kb on - strand, within MPMX20_04599 at 4815.184 kb on - strand, within MPMX20_04599 at 4815.186 kb on + strand, within MPMX20_04599 at 4815.225 kb on - strand, within MPMX20_04599 at 4815.233 kb on + strand, within MPMX20_04599 at 4815.233 kb on + strand, within MPMX20_04599 at 4815.233 kb on + strand, within MPMX20_04599 at 4815.241 kb on - strand, within MPMX20_04599 at 4815.241 kb on - strand, within MPMX20_04599 at 4815.246 kb on + strand, within MPMX20_04599 at 4815.268 kb on - strand, within MPMX20_04599 at 4815.270 kb on + strand, within MPMX20_04599 at 4815.278 kb on - strand, within MPMX20_04599 at 4815.278 kb on - strand, within MPMX20_04599 at 4815.490 kb on + strand, within MPMX20_04599 at 4815.498 kb on - strand, within MPMX20_04599 at 4815.498 kb on - strand, within MPMX20_04599 at 4815.586 kb on + strand at 4815.651 kb on + strand at 4815.651 kb on + strand at 4815.651 kb on + strand at 4815.659 kb on - strand at 4815.659 kb on - strand at 4815.659 kb on - strand at 4815.746 kb on + strand at 4815.746 kb on + strand at 4815.754 kb on - strand at 4815.792 kb on + strand at 4815.800 kb on - strand at 4815.813 kb on + strand at 4815.884 kb on + strand at 4815.891 kb on + strand at 4815.938 kb on + strand at 4815.938 kb on + strand at 4815.940 kb on - strand at 4815.944 kb on + strand at 4815.947 kb on - strand at 4815.947 kb on - strand at 4815.947 kb on - strand at 4816.087 kb on - strand at 4816.108 kb on + strand at 4816.109 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 4,814,131 - MPMX20_04598 0.43 +0.6 4,814,258 + MPMX20_04598 0.52 -3.7 4,814,263 - MPMX20_04598 0.52 +0.6 4,814,265 - MPMX20_04598 0.52 +0.4 4,814,305 + MPMX20_04598 0.55 -4.3 4,814,305 + MPMX20_04598 0.55 +0.7 4,814,313 - MPMX20_04598 0.56 -4.4 4,814,313 - MPMX20_04598 0.56 -3.2 4,814,313 - MPMX20_04598 0.56 -3.4 4,814,409 + MPMX20_04598 0.63 -2.6 4,814,459 - MPMX20_04598 0.67 -3.1 4,814,589 - MPMX20_04598 0.76 -3.1 4,814,726 - MPMX20_04598 0.86 -3.6 4,814,738 - MPMX20_04598 0.87 -1.0 4,814,777 + MPMX20_04598 0.90 +2.2 4,814,835 + -3.5 4,814,846 - +1.9 4,814,847 - -0.0 4,814,855 - -0.9 4,814,908 + +0.2 4,814,916 - -4.1 4,814,917 + +2.0 4,814,931 - -1.8 4,815,078 + -3.4 4,815,078 + -3.4 4,815,176 + MPMX20_04599 0.14 +1.4 4,815,176 + MPMX20_04599 0.14 +2.3 4,815,184 - MPMX20_04599 0.15 -1.7 4,815,184 - MPMX20_04599 0.15 -1.9 4,815,186 + MPMX20_04599 0.16 -3.7 4,815,225 - MPMX20_04599 0.23 +1.8 4,815,233 + MPMX20_04599 0.25 +2.1 4,815,233 + MPMX20_04599 0.25 +1.8 4,815,233 + MPMX20_04599 0.25 +1.4 4,815,241 - MPMX20_04599 0.26 -0.9 4,815,241 - MPMX20_04599 0.26 +2.0 4,815,246 + MPMX20_04599 0.27 +2.2 4,815,268 - MPMX20_04599 0.31 +1.6 4,815,270 + MPMX20_04599 0.32 -2.1 4,815,278 - MPMX20_04599 0.33 +1.2 4,815,278 - MPMX20_04599 0.33 -3.2 4,815,490 + MPMX20_04599 0.74 -2.0 4,815,498 - MPMX20_04599 0.76 +0.5 4,815,498 - MPMX20_04599 0.76 +1.9 4,815,586 + +1.8 4,815,651 + -2.3 4,815,651 + +0.8 4,815,651 + -3.1 4,815,659 - +1.7 4,815,659 - +3.0 4,815,659 - -1.6 4,815,746 + -0.4 4,815,746 + +0.3 4,815,754 - -1.3 4,815,792 + -0.2 4,815,800 - +0.6 4,815,813 + -0.1 4,815,884 + -0.0 4,815,891 + -0.3 4,815,938 + -0.9 4,815,938 + +3.1 4,815,940 - -0.9 4,815,944 + -1.7 4,815,947 - +0.6 4,815,947 - +0.3 4,815,947 - +1.6 4,816,087 - -0.0 4,816,108 + -2.6 4,816,109 + +0.7
Or see this region's nucleotide sequence