Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04581 and MPMX20_04582 are separated by 44 nucleotides MPMX20_04582 and MPMX20_04583 overlap by 4 nucleotides MPMX20_04583 and MPMX20_04584 overlap by 7 nucleotides
MPMX20_04581: MPMX20_04581 - hypothetical protein, at 4,793,254 to 4,794,195
_04581
MPMX20_04582: MPMX20_04582 - D-aminoacyl-tRNA deacylase, at 4,794,240 to 4,794,677
_04582
MPMX20_04583: MPMX20_04583 - hypothetical protein, at 4,794,674 to 4,795,555
_04583
MPMX20_04584: MPMX20_04584 - Alpha-D-glucose 1-phosphate phosphatase YihX, at 4,795,549 to 4,796,148
_04584
Position (kb)
4794
4795 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 4793.265 kb on + strand at 4793.277 kb on + strand at 4793.285 kb on - strand at 4793.390 kb on - strand, within MPMX20_04581 at 4793.448 kb on + strand, within MPMX20_04581 at 4793.448 kb on + strand, within MPMX20_04581 at 4793.448 kb on + strand, within MPMX20_04581 at 4793.448 kb on + strand, within MPMX20_04581 at 4793.448 kb on + strand, within MPMX20_04581 at 4793.448 kb on + strand, within MPMX20_04581 at 4793.448 kb on + strand, within MPMX20_04581 at 4793.483 kb on - strand, within MPMX20_04581 at 4793.536 kb on + strand, within MPMX20_04581 at 4793.544 kb on - strand, within MPMX20_04581 at 4793.554 kb on - strand, within MPMX20_04581 at 4793.648 kb on + strand, within MPMX20_04581 at 4793.648 kb on + strand, within MPMX20_04581 at 4793.648 kb on + strand, within MPMX20_04581 at 4793.655 kb on + strand, within MPMX20_04581 at 4793.656 kb on - strand, within MPMX20_04581 at 4793.656 kb on - strand, within MPMX20_04581 at 4793.656 kb on - strand, within MPMX20_04581 at 4793.658 kb on - strand, within MPMX20_04581 at 4793.707 kb on - strand, within MPMX20_04581 at 4793.707 kb on - strand, within MPMX20_04581 at 4793.713 kb on + strand, within MPMX20_04581 at 4793.718 kb on + strand, within MPMX20_04581 at 4793.718 kb on + strand, within MPMX20_04581 at 4793.718 kb on + strand, within MPMX20_04581 at 4793.718 kb on + strand, within MPMX20_04581 at 4793.718 kb on + strand, within MPMX20_04581 at 4793.718 kb on + strand, within MPMX20_04581 at 4793.726 kb on - strand, within MPMX20_04581 at 4793.726 kb on - strand, within MPMX20_04581 at 4793.726 kb on - strand, within MPMX20_04581 at 4793.726 kb on - strand, within MPMX20_04581 at 4793.831 kb on - strand, within MPMX20_04581 at 4793.860 kb on + strand, within MPMX20_04581 at 4793.879 kb on + strand, within MPMX20_04581 at 4793.885 kb on + strand, within MPMX20_04581 at 4793.936 kb on + strand, within MPMX20_04581 at 4793.938 kb on + strand, within MPMX20_04581 at 4793.944 kb on - strand, within MPMX20_04581 at 4793.945 kb on + strand, within MPMX20_04581 at 4793.953 kb on - strand, within MPMX20_04581 at 4793.953 kb on - strand, within MPMX20_04581 at 4793.953 kb on - strand, within MPMX20_04581 at 4793.983 kb on + strand, within MPMX20_04581 at 4794.032 kb on + strand, within MPMX20_04581 at 4794.034 kb on + strand, within MPMX20_04581 at 4794.040 kb on - strand, within MPMX20_04581 at 4794.110 kb on + strand at 4794.117 kb on - strand at 4794.197 kb on + strand at 4794.197 kb on + strand at 4794.197 kb on + strand at 4794.205 kb on - strand at 4794.217 kb on - strand at 4794.238 kb on + strand at 4794.296 kb on - strand, within MPMX20_04582 at 4794.330 kb on - strand, within MPMX20_04582 at 4794.373 kb on - strand, within MPMX20_04582 at 4794.391 kb on + strand, within MPMX20_04582 at 4794.391 kb on + strand, within MPMX20_04582 at 4794.400 kb on - strand, within MPMX20_04582 at 4794.450 kb on - strand, within MPMX20_04582 at 4794.496 kb on - strand, within MPMX20_04582 at 4794.541 kb on + strand, within MPMX20_04582 at 4794.583 kb on + strand, within MPMX20_04582 at 4794.583 kb on + strand, within MPMX20_04582 at 4794.645 kb on + strand at 4794.662 kb on + strand at 4794.662 kb on + strand at 4794.779 kb on - strand, within MPMX20_04583 at 4794.825 kb on - strand, within MPMX20_04583 at 4794.828 kb on + strand, within MPMX20_04583 at 4794.828 kb on + strand, within MPMX20_04583 at 4794.836 kb on - strand, within MPMX20_04583 at 4794.836 kb on - strand, within MPMX20_04583 at 4794.846 kb on + strand, within MPMX20_04583 at 4794.918 kb on + strand, within MPMX20_04583 at 4794.955 kb on + strand, within MPMX20_04583 at 4794.958 kb on - strand, within MPMX20_04583 at 4794.960 kb on + strand, within MPMX20_04583 at 4794.963 kb on - strand, within MPMX20_04583 at 4794.963 kb on - strand, within MPMX20_04583 at 4794.963 kb on - strand, within MPMX20_04583 at 4794.963 kb on - strand, within MPMX20_04583 at 4794.963 kb on - strand, within MPMX20_04583 at 4794.963 kb on - strand, within MPMX20_04583 at 4794.971 kb on - strand, within MPMX20_04583 at 4795.011 kb on + strand, within MPMX20_04583 at 4795.111 kb on + strand, within MPMX20_04583 at 4795.111 kb on + strand, within MPMX20_04583 at 4795.111 kb on + strand, within MPMX20_04583 at 4795.119 kb on - strand, within MPMX20_04583 at 4795.119 kb on - strand, within MPMX20_04583 at 4795.119 kb on - strand, within MPMX20_04583 at 4795.132 kb on + strand, within MPMX20_04583 at 4795.147 kb on + strand, within MPMX20_04583 at 4795.147 kb on - strand, within MPMX20_04583 at 4795.200 kb on + strand, within MPMX20_04583 at 4795.279 kb on + strand, within MPMX20_04583 at 4795.284 kb on + strand, within MPMX20_04583 at 4795.292 kb on + strand, within MPMX20_04583 at 4795.292 kb on - strand, within MPMX20_04583 at 4795.292 kb on - strand, within MPMX20_04583 at 4795.416 kb on + strand, within MPMX20_04583 at 4795.424 kb on - strand, within MPMX20_04583 at 4795.442 kb on - strand, within MPMX20_04583 at 4795.458 kb on + strand, within MPMX20_04583 at 4795.461 kb on + strand, within MPMX20_04583 at 4795.466 kb on + strand, within MPMX20_04583 at 4795.471 kb on + strand at 4795.492 kb on - strand at 4795.506 kb on - strand at 4795.506 kb on - strand at 4795.517 kb on + strand at 4795.521 kb on - strand at 4795.581 kb on - strand at 4795.595 kb on - strand at 4795.623 kb on + strand, within MPMX20_04584 at 4795.657 kb on + strand, within MPMX20_04584
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 4,793,265 + -0.7 4,793,277 + +0.1 4,793,285 - -1.6 4,793,390 - MPMX20_04581 0.14 -1.6 4,793,448 + MPMX20_04581 0.21 +1.0 4,793,448 + MPMX20_04581 0.21 +2.1 4,793,448 + MPMX20_04581 0.21 +0.8 4,793,448 + MPMX20_04581 0.21 -2.4 4,793,448 + MPMX20_04581 0.21 +2.6 4,793,448 + MPMX20_04581 0.21 -3.4 4,793,448 + MPMX20_04581 0.21 -2.6 4,793,483 - MPMX20_04581 0.24 -0.8 4,793,536 + MPMX20_04581 0.30 -2.9 4,793,544 - MPMX20_04581 0.31 +0.6 4,793,554 - MPMX20_04581 0.32 +2.3 4,793,648 + MPMX20_04581 0.42 +1.7 4,793,648 + MPMX20_04581 0.42 +0.3 4,793,648 + MPMX20_04581 0.42 -3.1 4,793,655 + MPMX20_04581 0.43 +0.8 4,793,656 - MPMX20_04581 0.43 +2.4 4,793,656 - MPMX20_04581 0.43 +1.6 4,793,656 - MPMX20_04581 0.43 -0.8 4,793,658 - MPMX20_04581 0.43 +1.0 4,793,707 - MPMX20_04581 0.48 +0.6 4,793,707 - MPMX20_04581 0.48 +0.3 4,793,713 + MPMX20_04581 0.49 +1.8 4,793,718 + MPMX20_04581 0.49 -0.3 4,793,718 + MPMX20_04581 0.49 -2.5 4,793,718 + MPMX20_04581 0.49 -2.0 4,793,718 + MPMX20_04581 0.49 -4.6 4,793,718 + MPMX20_04581 0.49 +3.6 4,793,718 + MPMX20_04581 0.49 -3.3 4,793,726 - MPMX20_04581 0.50 +0.7 4,793,726 - MPMX20_04581 0.50 +1.1 4,793,726 - MPMX20_04581 0.50 +1.9 4,793,726 - MPMX20_04581 0.50 -1.3 4,793,831 - MPMX20_04581 0.61 +3.1 4,793,860 + MPMX20_04581 0.64 +0.2 4,793,879 + MPMX20_04581 0.66 -0.2 4,793,885 + MPMX20_04581 0.67 +0.1 4,793,936 + MPMX20_04581 0.72 -0.0 4,793,938 + MPMX20_04581 0.73 -1.3 4,793,944 - MPMX20_04581 0.73 -1.7 4,793,945 + MPMX20_04581 0.73 -1.4 4,793,953 - MPMX20_04581 0.74 -1.0 4,793,953 - MPMX20_04581 0.74 +2.4 4,793,953 - MPMX20_04581 0.74 +0.5 4,793,983 + MPMX20_04581 0.77 -0.3 4,794,032 + MPMX20_04581 0.83 +0.6 4,794,034 + MPMX20_04581 0.83 +1.1 4,794,040 - MPMX20_04581 0.83 +1.3 4,794,110 + -3.9 4,794,117 - +1.1 4,794,197 + -2.6 4,794,197 + +2.3 4,794,197 + -2.4 4,794,205 - -1.6 4,794,217 - +0.3 4,794,238 + -1.6 4,794,296 - MPMX20_04582 0.13 +4.5 4,794,330 - MPMX20_04582 0.21 +1.4 4,794,373 - MPMX20_04582 0.30 +1.4 4,794,391 + MPMX20_04582 0.34 +3.5 4,794,391 + MPMX20_04582 0.34 +1.9 4,794,400 - MPMX20_04582 0.37 +0.7 4,794,450 - MPMX20_04582 0.48 -4.1 4,794,496 - MPMX20_04582 0.58 -2.9 4,794,541 + MPMX20_04582 0.69 -0.2 4,794,583 + MPMX20_04582 0.78 -2.3 4,794,583 + MPMX20_04582 0.78 +3.6 4,794,645 + +3.7 4,794,662 + -2.2 4,794,662 + -3.1 4,794,779 - MPMX20_04583 0.12 +2.4 4,794,825 - MPMX20_04583 0.17 -2.4 4,794,828 + MPMX20_04583 0.17 +2.1 4,794,828 + MPMX20_04583 0.17 -0.7 4,794,836 - MPMX20_04583 0.18 -0.0 4,794,836 - MPMX20_04583 0.18 -2.6 4,794,846 + MPMX20_04583 0.20 +2.4 4,794,918 + MPMX20_04583 0.28 +2.8 4,794,955 + MPMX20_04583 0.32 +2.3 4,794,958 - MPMX20_04583 0.32 -2.8 4,794,960 + MPMX20_04583 0.32 +0.8 4,794,963 - MPMX20_04583 0.33 -1.0 4,794,963 - MPMX20_04583 0.33 -2.5 4,794,963 - MPMX20_04583 0.33 +0.1 4,794,963 - MPMX20_04583 0.33 +0.6 4,794,963 - MPMX20_04583 0.33 +0.6 4,794,963 - MPMX20_04583 0.33 +1.0 4,794,971 - MPMX20_04583 0.34 -0.0 4,795,011 + MPMX20_04583 0.38 -1.3 4,795,111 + MPMX20_04583 0.50 -2.7 4,795,111 + MPMX20_04583 0.50 +4.1 4,795,111 + MPMX20_04583 0.50 +0.3 4,795,119 - MPMX20_04583 0.50 +1.0 4,795,119 - MPMX20_04583 0.50 -1.4 4,795,119 - MPMX20_04583 0.50 -1.3 4,795,132 + MPMX20_04583 0.52 +2.4 4,795,147 + MPMX20_04583 0.54 -0.0 4,795,147 - MPMX20_04583 0.54 +1.7 4,795,200 + MPMX20_04583 0.60 +0.8 4,795,279 + MPMX20_04583 0.69 -2.1 4,795,284 + MPMX20_04583 0.69 -0.2 4,795,292 + MPMX20_04583 0.70 -2.6 4,795,292 - MPMX20_04583 0.70 +2.9 4,795,292 - MPMX20_04583 0.70 -3.1 4,795,416 + MPMX20_04583 0.84 +1.9 4,795,424 - MPMX20_04583 0.85 -3.1 4,795,442 - MPMX20_04583 0.87 +0.1 4,795,458 + MPMX20_04583 0.89 -3.0 4,795,461 + MPMX20_04583 0.89 +0.1 4,795,466 + MPMX20_04583 0.90 -2.6 4,795,471 + +2.5 4,795,492 - +0.3 4,795,506 - -3.2 4,795,506 - -1.4 4,795,517 + -1.3 4,795,521 - -1.6 4,795,581 - -1.9 4,795,595 - -0.0 4,795,623 + MPMX20_04584 0.12 -1.8 4,795,657 + MPMX20_04584 0.18 +2.2
Or see this region's nucleotide sequence