Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04582

Experiment: octanoate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04581 and MPMX20_04582 are separated by 44 nucleotidesMPMX20_04582 and MPMX20_04583 overlap by 4 nucleotidesMPMX20_04583 and MPMX20_04584 overlap by 7 nucleotides MPMX20_04581: MPMX20_04581 - hypothetical protein, at 4,793,254 to 4,794,195 _04581 MPMX20_04582: MPMX20_04582 - D-aminoacyl-tRNA deacylase, at 4,794,240 to 4,794,677 _04582 MPMX20_04583: MPMX20_04583 - hypothetical protein, at 4,794,674 to 4,795,555 _04583 MPMX20_04584: MPMX20_04584 - Alpha-D-glucose 1-phosphate phosphatase YihX, at 4,795,549 to 4,796,148 _04584 Position (kb) 4794 4795Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 4793.265 kb on + strandat 4793.277 kb on + strandat 4793.285 kb on - strandat 4793.390 kb on - strand, within MPMX20_04581at 4793.448 kb on + strand, within MPMX20_04581at 4793.448 kb on + strand, within MPMX20_04581at 4793.448 kb on + strand, within MPMX20_04581at 4793.448 kb on + strand, within MPMX20_04581at 4793.448 kb on + strand, within MPMX20_04581at 4793.448 kb on + strand, within MPMX20_04581at 4793.448 kb on + strand, within MPMX20_04581at 4793.483 kb on - strand, within MPMX20_04581at 4793.536 kb on + strand, within MPMX20_04581at 4793.544 kb on - strand, within MPMX20_04581at 4793.554 kb on - strand, within MPMX20_04581at 4793.648 kb on + strand, within MPMX20_04581at 4793.648 kb on + strand, within MPMX20_04581at 4793.648 kb on + strand, within MPMX20_04581at 4793.655 kb on + strand, within MPMX20_04581at 4793.656 kb on - strand, within MPMX20_04581at 4793.656 kb on - strand, within MPMX20_04581at 4793.656 kb on - strand, within MPMX20_04581at 4793.658 kb on - strand, within MPMX20_04581at 4793.707 kb on - strand, within MPMX20_04581at 4793.707 kb on - strand, within MPMX20_04581at 4793.713 kb on + strand, within MPMX20_04581at 4793.718 kb on + strand, within MPMX20_04581at 4793.718 kb on + strand, within MPMX20_04581at 4793.718 kb on + strand, within MPMX20_04581at 4793.718 kb on + strand, within MPMX20_04581at 4793.718 kb on + strand, within MPMX20_04581at 4793.718 kb on + strand, within MPMX20_04581at 4793.726 kb on - strand, within MPMX20_04581at 4793.726 kb on - strand, within MPMX20_04581at 4793.726 kb on - strand, within MPMX20_04581at 4793.726 kb on - strand, within MPMX20_04581at 4793.831 kb on - strand, within MPMX20_04581at 4793.860 kb on + strand, within MPMX20_04581at 4793.879 kb on + strand, within MPMX20_04581at 4793.885 kb on + strand, within MPMX20_04581at 4793.936 kb on + strand, within MPMX20_04581at 4793.938 kb on + strand, within MPMX20_04581at 4793.944 kb on - strand, within MPMX20_04581at 4793.945 kb on + strand, within MPMX20_04581at 4793.953 kb on - strand, within MPMX20_04581at 4793.953 kb on - strand, within MPMX20_04581at 4793.953 kb on - strand, within MPMX20_04581at 4793.983 kb on + strand, within MPMX20_04581at 4794.032 kb on + strand, within MPMX20_04581at 4794.034 kb on + strand, within MPMX20_04581at 4794.040 kb on - strand, within MPMX20_04581at 4794.110 kb on + strandat 4794.117 kb on - strandat 4794.197 kb on + strandat 4794.197 kb on + strandat 4794.197 kb on + strandat 4794.205 kb on - strandat 4794.217 kb on - strandat 4794.238 kb on + strandat 4794.296 kb on - strand, within MPMX20_04582at 4794.330 kb on - strand, within MPMX20_04582at 4794.373 kb on - strand, within MPMX20_04582at 4794.391 kb on + strand, within MPMX20_04582at 4794.391 kb on + strand, within MPMX20_04582at 4794.400 kb on - strand, within MPMX20_04582at 4794.450 kb on - strand, within MPMX20_04582at 4794.496 kb on - strand, within MPMX20_04582at 4794.541 kb on + strand, within MPMX20_04582at 4794.583 kb on + strand, within MPMX20_04582at 4794.583 kb on + strand, within MPMX20_04582at 4794.645 kb on + strandat 4794.662 kb on + strandat 4794.662 kb on + strandat 4794.779 kb on - strand, within MPMX20_04583at 4794.825 kb on - strand, within MPMX20_04583at 4794.828 kb on + strand, within MPMX20_04583at 4794.828 kb on + strand, within MPMX20_04583at 4794.836 kb on - strand, within MPMX20_04583at 4794.836 kb on - strand, within MPMX20_04583at 4794.846 kb on + strand, within MPMX20_04583at 4794.918 kb on + strand, within MPMX20_04583at 4794.955 kb on + strand, within MPMX20_04583at 4794.958 kb on - strand, within MPMX20_04583at 4794.960 kb on + strand, within MPMX20_04583at 4794.963 kb on - strand, within MPMX20_04583at 4794.963 kb on - strand, within MPMX20_04583at 4794.963 kb on - strand, within MPMX20_04583at 4794.963 kb on - strand, within MPMX20_04583at 4794.963 kb on - strand, within MPMX20_04583at 4794.963 kb on - strand, within MPMX20_04583at 4794.971 kb on - strand, within MPMX20_04583at 4795.011 kb on + strand, within MPMX20_04583at 4795.111 kb on + strand, within MPMX20_04583at 4795.111 kb on + strand, within MPMX20_04583at 4795.111 kb on + strand, within MPMX20_04583at 4795.119 kb on - strand, within MPMX20_04583at 4795.119 kb on - strand, within MPMX20_04583at 4795.119 kb on - strand, within MPMX20_04583at 4795.132 kb on + strand, within MPMX20_04583at 4795.147 kb on + strand, within MPMX20_04583at 4795.147 kb on - strand, within MPMX20_04583at 4795.200 kb on + strand, within MPMX20_04583at 4795.279 kb on + strand, within MPMX20_04583at 4795.284 kb on + strand, within MPMX20_04583at 4795.292 kb on + strand, within MPMX20_04583at 4795.292 kb on - strand, within MPMX20_04583at 4795.292 kb on - strand, within MPMX20_04583at 4795.416 kb on + strand, within MPMX20_04583at 4795.424 kb on - strand, within MPMX20_04583at 4795.442 kb on - strand, within MPMX20_04583at 4795.458 kb on + strand, within MPMX20_04583at 4795.461 kb on + strand, within MPMX20_04583at 4795.466 kb on + strand, within MPMX20_04583at 4795.471 kb on + strandat 4795.492 kb on - strandat 4795.506 kb on - strandat 4795.506 kb on - strandat 4795.517 kb on + strandat 4795.521 kb on - strandat 4795.581 kb on - strandat 4795.595 kb on - strandat 4795.623 kb on + strand, within MPMX20_04584at 4795.657 kb on + strand, within MPMX20_04584

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Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
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4,793,265 + -0.7
4,793,277 + +0.1
4,793,285 - -1.6
4,793,390 - MPMX20_04581 0.14 -1.6
4,793,448 + MPMX20_04581 0.21 +1.0
4,793,448 + MPMX20_04581 0.21 +2.1
4,793,448 + MPMX20_04581 0.21 +0.8
4,793,448 + MPMX20_04581 0.21 -2.4
4,793,448 + MPMX20_04581 0.21 +2.6
4,793,448 + MPMX20_04581 0.21 -3.4
4,793,448 + MPMX20_04581 0.21 -2.6
4,793,483 - MPMX20_04581 0.24 -0.8
4,793,536 + MPMX20_04581 0.30 -2.9
4,793,544 - MPMX20_04581 0.31 +0.6
4,793,554 - MPMX20_04581 0.32 +2.3
4,793,648 + MPMX20_04581 0.42 +1.7
4,793,648 + MPMX20_04581 0.42 +0.3
4,793,648 + MPMX20_04581 0.42 -3.1
4,793,655 + MPMX20_04581 0.43 +0.8
4,793,656 - MPMX20_04581 0.43 +2.4
4,793,656 - MPMX20_04581 0.43 +1.6
4,793,656 - MPMX20_04581 0.43 -0.8
4,793,658 - MPMX20_04581 0.43 +1.0
4,793,707 - MPMX20_04581 0.48 +0.6
4,793,707 - MPMX20_04581 0.48 +0.3
4,793,713 + MPMX20_04581 0.49 +1.8
4,793,718 + MPMX20_04581 0.49 -0.3
4,793,718 + MPMX20_04581 0.49 -2.5
4,793,718 + MPMX20_04581 0.49 -2.0
4,793,718 + MPMX20_04581 0.49 -4.6
4,793,718 + MPMX20_04581 0.49 +3.6
4,793,718 + MPMX20_04581 0.49 -3.3
4,793,726 - MPMX20_04581 0.50 +0.7
4,793,726 - MPMX20_04581 0.50 +1.1
4,793,726 - MPMX20_04581 0.50 +1.9
4,793,726 - MPMX20_04581 0.50 -1.3
4,793,831 - MPMX20_04581 0.61 +3.1
4,793,860 + MPMX20_04581 0.64 +0.2
4,793,879 + MPMX20_04581 0.66 -0.2
4,793,885 + MPMX20_04581 0.67 +0.1
4,793,936 + MPMX20_04581 0.72 -0.0
4,793,938 + MPMX20_04581 0.73 -1.3
4,793,944 - MPMX20_04581 0.73 -1.7
4,793,945 + MPMX20_04581 0.73 -1.4
4,793,953 - MPMX20_04581 0.74 -1.0
4,793,953 - MPMX20_04581 0.74 +2.4
4,793,953 - MPMX20_04581 0.74 +0.5
4,793,983 + MPMX20_04581 0.77 -0.3
4,794,032 + MPMX20_04581 0.83 +0.6
4,794,034 + MPMX20_04581 0.83 +1.1
4,794,040 - MPMX20_04581 0.83 +1.3
4,794,110 + -3.9
4,794,117 - +1.1
4,794,197 + -2.6
4,794,197 + +2.3
4,794,197 + -2.4
4,794,205 - -1.6
4,794,217 - +0.3
4,794,238 + -1.6
4,794,296 - MPMX20_04582 0.13 +4.5
4,794,330 - MPMX20_04582 0.21 +1.4
4,794,373 - MPMX20_04582 0.30 +1.4
4,794,391 + MPMX20_04582 0.34 +3.5
4,794,391 + MPMX20_04582 0.34 +1.9
4,794,400 - MPMX20_04582 0.37 +0.7
4,794,450 - MPMX20_04582 0.48 -4.1
4,794,496 - MPMX20_04582 0.58 -2.9
4,794,541 + MPMX20_04582 0.69 -0.2
4,794,583 + MPMX20_04582 0.78 -2.3
4,794,583 + MPMX20_04582 0.78 +3.6
4,794,645 + +3.7
4,794,662 + -2.2
4,794,662 + -3.1
4,794,779 - MPMX20_04583 0.12 +2.4
4,794,825 - MPMX20_04583 0.17 -2.4
4,794,828 + MPMX20_04583 0.17 +2.1
4,794,828 + MPMX20_04583 0.17 -0.7
4,794,836 - MPMX20_04583 0.18 -0.0
4,794,836 - MPMX20_04583 0.18 -2.6
4,794,846 + MPMX20_04583 0.20 +2.4
4,794,918 + MPMX20_04583 0.28 +2.8
4,794,955 + MPMX20_04583 0.32 +2.3
4,794,958 - MPMX20_04583 0.32 -2.8
4,794,960 + MPMX20_04583 0.32 +0.8
4,794,963 - MPMX20_04583 0.33 -1.0
4,794,963 - MPMX20_04583 0.33 -2.5
4,794,963 - MPMX20_04583 0.33 +0.1
4,794,963 - MPMX20_04583 0.33 +0.6
4,794,963 - MPMX20_04583 0.33 +0.6
4,794,963 - MPMX20_04583 0.33 +1.0
4,794,971 - MPMX20_04583 0.34 -0.0
4,795,011 + MPMX20_04583 0.38 -1.3
4,795,111 + MPMX20_04583 0.50 -2.7
4,795,111 + MPMX20_04583 0.50 +4.1
4,795,111 + MPMX20_04583 0.50 +0.3
4,795,119 - MPMX20_04583 0.50 +1.0
4,795,119 - MPMX20_04583 0.50 -1.4
4,795,119 - MPMX20_04583 0.50 -1.3
4,795,132 + MPMX20_04583 0.52 +2.4
4,795,147 + MPMX20_04583 0.54 -0.0
4,795,147 - MPMX20_04583 0.54 +1.7
4,795,200 + MPMX20_04583 0.60 +0.8
4,795,279 + MPMX20_04583 0.69 -2.1
4,795,284 + MPMX20_04583 0.69 -0.2
4,795,292 + MPMX20_04583 0.70 -2.6
4,795,292 - MPMX20_04583 0.70 +2.9
4,795,292 - MPMX20_04583 0.70 -3.1
4,795,416 + MPMX20_04583 0.84 +1.9
4,795,424 - MPMX20_04583 0.85 -3.1
4,795,442 - MPMX20_04583 0.87 +0.1
4,795,458 + MPMX20_04583 0.89 -3.0
4,795,461 + MPMX20_04583 0.89 +0.1
4,795,466 + MPMX20_04583 0.90 -2.6
4,795,471 + +2.5
4,795,492 - +0.3
4,795,506 - -3.2
4,795,506 - -1.4
4,795,517 + -1.3
4,795,521 - -1.6
4,795,581 - -1.9
4,795,595 - -0.0
4,795,623 + MPMX20_04584 0.12 -1.8
4,795,657 + MPMX20_04584 0.18 +2.2

Or see this region's nucleotide sequence