Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04572

Experiment: octanoate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04570 and MPMX20_04571 are separated by 104 nucleotidesMPMX20_04571 and MPMX20_04572 overlap by 1 nucleotidesMPMX20_04572 and MPMX20_04573 are separated by 41 nucleotidesMPMX20_04573 and MPMX20_04574 are separated by 114 nucleotides MPMX20_04570: MPMX20_04570 - HTH-type transcriptional regulator SutR, at 4,783,298 to 4,783,846 _04570 MPMX20_04571: MPMX20_04571 - hypothetical protein, at 4,783,951 to 4,784,610 _04571 MPMX20_04572: MPMX20_04572 - hypothetical protein, at 4,784,610 to 4,784,933 _04572 MPMX20_04573: MPMX20_04573 - hypothetical protein, at 4,784,975 to 4,785,187 _04573 MPMX20_04574: MPMX20_04574 - Sulfur carrier protein FdhD, at 4,785,302 to 4,786,138 _04574 Position (kb) 4784 4785Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 4783.627 kb on - strand, within MPMX20_04570at 4783.629 kb on - strand, within MPMX20_04570at 4783.672 kb on + strand, within MPMX20_04570at 4783.675 kb on - strand, within MPMX20_04570at 4783.680 kb on - strand, within MPMX20_04570at 4783.793 kb on - strandat 4783.832 kb on + strandat 4783.840 kb on - strandat 4783.963 kb on - strandat 4783.985 kb on + strandat 4783.985 kb on + strandat 4783.999 kb on + strandat 4783.999 kb on + strandat 4784.007 kb on - strandat 4784.017 kb on - strand, within MPMX20_04571at 4784.034 kb on + strand, within MPMX20_04571at 4784.034 kb on + strand, within MPMX20_04571at 4784.055 kb on + strand, within MPMX20_04571at 4784.089 kb on - strand, within MPMX20_04571at 4784.091 kb on + strand, within MPMX20_04571at 4784.091 kb on + strand, within MPMX20_04571at 4784.091 kb on + strand, within MPMX20_04571at 4784.091 kb on + strand, within MPMX20_04571at 4784.099 kb on - strand, within MPMX20_04571at 4784.101 kb on - strand, within MPMX20_04571at 4784.165 kb on - strand, within MPMX20_04571at 4784.232 kb on + strand, within MPMX20_04571at 4784.277 kb on + strand, within MPMX20_04571at 4784.290 kb on + strand, within MPMX20_04571at 4784.298 kb on - strand, within MPMX20_04571at 4784.322 kb on + strand, within MPMX20_04571at 4784.330 kb on - strand, within MPMX20_04571at 4784.330 kb on - strand, within MPMX20_04571at 4784.386 kb on - strand, within MPMX20_04571at 4784.497 kb on + strand, within MPMX20_04571at 4784.497 kb on + strand, within MPMX20_04571at 4784.497 kb on + strand, within MPMX20_04571at 4784.505 kb on - strand, within MPMX20_04571at 4784.505 kb on - strand, within MPMX20_04571at 4784.506 kb on - strand, within MPMX20_04571at 4784.519 kb on + strand, within MPMX20_04571at 4784.519 kb on + strand, within MPMX20_04571at 4784.569 kb on + strandat 4784.588 kb on + strandat 4784.588 kb on + strandat 4784.588 kb on + strandat 4784.591 kb on - strandat 4784.728 kb on - strand, within MPMX20_04572at 4784.732 kb on + strand, within MPMX20_04572at 4784.740 kb on - strand, within MPMX20_04572at 4784.782 kb on - strand, within MPMX20_04572at 4784.786 kb on + strand, within MPMX20_04572at 4784.786 kb on + strand, within MPMX20_04572at 4784.794 kb on - strand, within MPMX20_04572at 4784.843 kb on + strand, within MPMX20_04572at 4784.843 kb on + strand, within MPMX20_04572at 4784.851 kb on - strand, within MPMX20_04572at 4784.912 kb on - strandat 4784.965 kb on + strandat 4784.986 kb on + strandat 4784.994 kb on - strandat 4784.994 kb on - strandat 4784.998 kb on + strand, within MPMX20_04573at 4785.006 kb on - strand, within MPMX20_04573at 4785.020 kb on + strand, within MPMX20_04573at 4785.033 kb on - strand, within MPMX20_04573at 4785.054 kb on + strand, within MPMX20_04573at 4785.054 kb on + strand, within MPMX20_04573at 4785.054 kb on + strand, within MPMX20_04573at 4785.054 kb on + strand, within MPMX20_04573at 4785.062 kb on - strand, within MPMX20_04573at 4785.062 kb on - strand, within MPMX20_04573at 4785.062 kb on - strand, within MPMX20_04573at 4785.062 kb on - strand, within MPMX20_04573at 4785.096 kb on + strand, within MPMX20_04573at 4785.387 kb on - strand, within MPMX20_04574at 4785.389 kb on + strand, within MPMX20_04574at 4785.391 kb on + strand, within MPMX20_04574at 4785.391 kb on + strand, within MPMX20_04574at 4785.452 kb on - strand, within MPMX20_04574at 4785.479 kb on - strand, within MPMX20_04574at 4785.507 kb on - strand, within MPMX20_04574at 4785.507 kb on - strand, within MPMX20_04574at 4785.557 kb on - strand, within MPMX20_04574at 4785.557 kb on - strand, within MPMX20_04574at 4785.665 kb on - strand, within MPMX20_04574at 4785.666 kb on + strand, within MPMX20_04574at 4785.684 kb on - strand, within MPMX20_04574at 4785.711 kb on - strand, within MPMX20_04574at 4785.730 kb on - strand, within MPMX20_04574at 4785.760 kb on + strand, within MPMX20_04574at 4785.768 kb on - strand, within MPMX20_04574at 4785.856 kb on + strand, within MPMX20_04574at 4785.864 kb on - strand, within MPMX20_04574at 4785.864 kb on - strand, within MPMX20_04574

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Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
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4,783,627 - MPMX20_04570 0.60 -3.9
4,783,629 - MPMX20_04570 0.60 -0.1
4,783,672 + MPMX20_04570 0.68 -1.4
4,783,675 - MPMX20_04570 0.69 +0.8
4,783,680 - MPMX20_04570 0.70 +2.6
4,783,793 - -3.4
4,783,832 + +0.8
4,783,840 - +1.4
4,783,963 - +1.2
4,783,985 + +2.1
4,783,985 + -2.8
4,783,999 + -0.3
4,783,999 + -3.1
4,784,007 - -0.6
4,784,017 - MPMX20_04571 0.10 -2.5
4,784,034 + MPMX20_04571 0.13 -2.1
4,784,034 + MPMX20_04571 0.13 -2.5
4,784,055 + MPMX20_04571 0.16 -3.0
4,784,089 - MPMX20_04571 0.21 -3.3
4,784,091 + MPMX20_04571 0.21 -0.4
4,784,091 + MPMX20_04571 0.21 -3.0
4,784,091 + MPMX20_04571 0.21 -2.1
4,784,091 + MPMX20_04571 0.21 -1.3
4,784,099 - MPMX20_04571 0.22 -1.8
4,784,101 - MPMX20_04571 0.23 -3.3
4,784,165 - MPMX20_04571 0.32 +1.6
4,784,232 + MPMX20_04571 0.43 -3.5
4,784,277 + MPMX20_04571 0.49 +0.6
4,784,290 + MPMX20_04571 0.51 +0.6
4,784,298 - MPMX20_04571 0.53 +2.9
4,784,322 + MPMX20_04571 0.56 -2.1
4,784,330 - MPMX20_04571 0.57 +0.2
4,784,330 - MPMX20_04571 0.57 +1.9
4,784,386 - MPMX20_04571 0.66 +0.5
4,784,497 + MPMX20_04571 0.83 +0.8
4,784,497 + MPMX20_04571 0.83 +0.1
4,784,497 + MPMX20_04571 0.83 -2.5
4,784,505 - MPMX20_04571 0.84 -1.2
4,784,505 - MPMX20_04571 0.84 -1.8
4,784,506 - MPMX20_04571 0.84 +2.8
4,784,519 + MPMX20_04571 0.86 +0.8
4,784,519 + MPMX20_04571 0.86 -2.0
4,784,569 + -1.3
4,784,588 + +0.3
4,784,588 + -2.8
4,784,588 + +1.8
4,784,591 - -2.6
4,784,728 - MPMX20_04572 0.36 +0.8
4,784,732 + MPMX20_04572 0.38 -2.5
4,784,740 - MPMX20_04572 0.40 -2.8
4,784,782 - MPMX20_04572 0.53 -0.4
4,784,786 + MPMX20_04572 0.54 +0.6
4,784,786 + MPMX20_04572 0.54 -2.8
4,784,794 - MPMX20_04572 0.57 +0.3
4,784,843 + MPMX20_04572 0.72 +0.3
4,784,843 + MPMX20_04572 0.72 -1.4
4,784,851 - MPMX20_04572 0.74 -3.0
4,784,912 - -2.1
4,784,965 + -1.3
4,784,986 + +2.8
4,784,994 - -2.4
4,784,994 - -0.3
4,784,998 + MPMX20_04573 0.11 -0.3
4,785,006 - MPMX20_04573 0.15 +2.9
4,785,020 + MPMX20_04573 0.21 -1.1
4,785,033 - MPMX20_04573 0.27 -1.1
4,785,054 + MPMX20_04573 0.37 +1.8
4,785,054 + MPMX20_04573 0.37 -3.4
4,785,054 + MPMX20_04573 0.37 -2.2
4,785,054 + MPMX20_04573 0.37 +1.3
4,785,062 - MPMX20_04573 0.41 -3.3
4,785,062 - MPMX20_04573 0.41 +3.0
4,785,062 - MPMX20_04573 0.41 -2.0
4,785,062 - MPMX20_04573 0.41 +1.4
4,785,096 + MPMX20_04573 0.57 +0.3
4,785,387 - MPMX20_04574 0.10 +0.6
4,785,389 + MPMX20_04574 0.10 +0.7
4,785,391 + MPMX20_04574 0.11 -0.3
4,785,391 + MPMX20_04574 0.11 -2.4
4,785,452 - MPMX20_04574 0.18 -1.7
4,785,479 - MPMX20_04574 0.21 +0.5
4,785,507 - MPMX20_04574 0.24 +1.7
4,785,507 - MPMX20_04574 0.24 -3.9
4,785,557 - MPMX20_04574 0.30 -2.4
4,785,557 - MPMX20_04574 0.30 +1.1
4,785,665 - MPMX20_04574 0.43 +2.3
4,785,666 + MPMX20_04574 0.43 -2.5
4,785,684 - MPMX20_04574 0.46 +1.4
4,785,711 - MPMX20_04574 0.49 -1.0
4,785,730 - MPMX20_04574 0.51 -3.3
4,785,760 + MPMX20_04574 0.55 +1.2
4,785,768 - MPMX20_04574 0.56 -1.2
4,785,856 + MPMX20_04574 0.66 -3.2
4,785,864 - MPMX20_04574 0.67 +3.5
4,785,864 - MPMX20_04574 0.67 -0.4

Or see this region's nucleotide sequence