Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04542

Experiment: octanoate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04540 and MPMX20_04541 are separated by 59 nucleotidesMPMX20_04541 and MPMX20_04542 are separated by 398 nucleotidesMPMX20_04542 and MPMX20_04543 are separated by 21 nucleotides MPMX20_04540: MPMX20_04540 - Regulator of ribonuclease activity A, at 4,753,996 to 4,754,481 _04540 MPMX20_04541: MPMX20_04541 - Cell division protein ZapB, at 4,754,541 to 4,754,780 _04541 MPMX20_04542: MPMX20_04542 - Glycerol uptake facilitator protein, at 4,755,179 to 4,756,024 _04542 MPMX20_04543: MPMX20_04543 - Glycerol kinase, at 4,756,046 to 4,757,554 _04543 Position (kb) 4755 4756 4757Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 4754.204 kb on + strand, within MPMX20_04540at 4754.214 kb on + strand, within MPMX20_04540at 4754.242 kb on + strand, within MPMX20_04540at 4754.253 kb on + strand, within MPMX20_04540at 4754.271 kb on + strand, within MPMX20_04540at 4754.277 kb on - strand, within MPMX20_04540at 4754.281 kb on + strand, within MPMX20_04540at 4754.364 kb on - strand, within MPMX20_04540at 4754.404 kb on + strand, within MPMX20_04540at 4754.444 kb on + strandat 4754.522 kb on - strandat 4754.557 kb on + strandat 4754.559 kb on + strandat 4754.565 kb on - strand, within MPMX20_04541at 4754.565 kb on - strand, within MPMX20_04541at 4754.567 kb on - strand, within MPMX20_04541at 4754.592 kb on + strand, within MPMX20_04541at 4754.660 kb on - strand, within MPMX20_04541at 4754.717 kb on + strand, within MPMX20_04541at 4754.717 kb on + strand, within MPMX20_04541at 4754.768 kb on + strandat 4754.799 kb on - strandat 4754.812 kb on - strandat 4754.917 kb on + strandat 4754.917 kb on + strandat 4755.187 kb on + strandat 4755.195 kb on - strandat 4755.231 kb on - strandat 4755.256 kb on + strandat 4755.291 kb on + strand, within MPMX20_04542at 4755.316 kb on + strand, within MPMX20_04542at 4755.354 kb on + strand, within MPMX20_04542at 4755.354 kb on + strand, within MPMX20_04542at 4755.374 kb on + strand, within MPMX20_04542at 4755.374 kb on + strand, within MPMX20_04542at 4755.382 kb on - strand, within MPMX20_04542at 4755.382 kb on - strand, within MPMX20_04542at 4755.442 kb on - strand, within MPMX20_04542at 4755.534 kb on + strand, within MPMX20_04542at 4755.542 kb on + strand, within MPMX20_04542at 4755.550 kb on - strand, within MPMX20_04542at 4755.595 kb on - strand, within MPMX20_04542at 4755.599 kb on - strand, within MPMX20_04542at 4755.638 kb on - strand, within MPMX20_04542at 4755.650 kb on + strand, within MPMX20_04542at 4755.660 kb on + strand, within MPMX20_04542at 4755.660 kb on + strand, within MPMX20_04542at 4755.668 kb on - strand, within MPMX20_04542at 4755.668 kb on - strand, within MPMX20_04542at 4755.838 kb on - strand, within MPMX20_04542at 4755.848 kb on - strand, within MPMX20_04542at 4755.853 kb on - strand, within MPMX20_04542at 4755.874 kb on + strand, within MPMX20_04542at 4755.901 kb on + strand, within MPMX20_04542at 4755.901 kb on + strand, within MPMX20_04542at 4755.906 kb on + strand, within MPMX20_04542at 4755.907 kb on - strand, within MPMX20_04542at 4755.909 kb on - strand, within MPMX20_04542at 4755.909 kb on - strand, within MPMX20_04542at 4755.914 kb on - strand, within MPMX20_04542at 4755.977 kb on - strandat 4756.079 kb on - strandat 4756.159 kb on + strandat 4756.159 kb on + strandat 4756.179 kb on + strandat 4756.187 kb on - strandat 4756.187 kb on - strandat 4756.191 kb on + strandat 4756.192 kb on - strandat 4756.201 kb on + strand, within MPMX20_04543at 4756.201 kb on + strand, within MPMX20_04543at 4756.202 kb on - strand, within MPMX20_04543at 4756.204 kb on - strand, within MPMX20_04543at 4756.209 kb on - strand, within MPMX20_04543at 4756.209 kb on - strand, within MPMX20_04543at 4756.218 kb on + strand, within MPMX20_04543at 4756.226 kb on - strand, within MPMX20_04543at 4756.228 kb on + strand, within MPMX20_04543at 4756.228 kb on + strand, within MPMX20_04543at 4756.235 kb on - strand, within MPMX20_04543at 4756.236 kb on - strand, within MPMX20_04543at 4756.240 kb on + strand, within MPMX20_04543at 4756.360 kb on + strand, within MPMX20_04543at 4756.360 kb on - strand, within MPMX20_04543at 4756.388 kb on + strand, within MPMX20_04543at 4756.497 kb on - strand, within MPMX20_04543at 4756.497 kb on - strand, within MPMX20_04543at 4756.539 kb on - strand, within MPMX20_04543at 4756.568 kb on + strand, within MPMX20_04543at 4756.576 kb on - strand, within MPMX20_04543at 4756.637 kb on - strand, within MPMX20_04543at 4756.642 kb on - strand, within MPMX20_04543at 4756.676 kb on - strand, within MPMX20_04543at 4756.677 kb on - strand, within MPMX20_04543at 4756.697 kb on - strand, within MPMX20_04543at 4756.807 kb on + strand, within MPMX20_04543at 4756.913 kb on + strand, within MPMX20_04543at 4756.966 kb on + strand, within MPMX20_04543at 4756.974 kb on - strand, within MPMX20_04543at 4756.979 kb on - strand, within MPMX20_04543

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Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
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4,754,204 + MPMX20_04540 0.43 -0.4
4,754,214 + MPMX20_04540 0.45 -0.3
4,754,242 + MPMX20_04540 0.51 -1.5
4,754,253 + MPMX20_04540 0.53 -1.4
4,754,271 + MPMX20_04540 0.57 +2.1
4,754,277 - MPMX20_04540 0.58 -2.2
4,754,281 + MPMX20_04540 0.59 -0.2
4,754,364 - MPMX20_04540 0.76 +1.1
4,754,404 + MPMX20_04540 0.84 -0.4
4,754,444 + -0.5
4,754,522 - -0.9
4,754,557 + -3.1
4,754,559 + +1.9
4,754,565 - MPMX20_04541 0.10 +2.1
4,754,565 - MPMX20_04541 0.10 -2.4
4,754,567 - MPMX20_04541 0.11 +1.5
4,754,592 + MPMX20_04541 0.21 +0.6
4,754,660 - MPMX20_04541 0.50 -2.4
4,754,717 + MPMX20_04541 0.73 -1.3
4,754,717 + MPMX20_04541 0.73 -0.8
4,754,768 + -3.6
4,754,799 - +1.7
4,754,812 - -1.9
4,754,917 + -1.6
4,754,917 + -1.4
4,755,187 + -0.4
4,755,195 - -2.3
4,755,231 - -0.4
4,755,256 + -2.8
4,755,291 + MPMX20_04542 0.13 -3.1
4,755,316 + MPMX20_04542 0.16 +3.1
4,755,354 + MPMX20_04542 0.21 +1.1
4,755,354 + MPMX20_04542 0.21 -2.3
4,755,374 + MPMX20_04542 0.23 -0.0
4,755,374 + MPMX20_04542 0.23 -2.0
4,755,382 - MPMX20_04542 0.24 -1.8
4,755,382 - MPMX20_04542 0.24 -0.3
4,755,442 - MPMX20_04542 0.31 -2.5
4,755,534 + MPMX20_04542 0.42 -1.1
4,755,542 + MPMX20_04542 0.43 +0.2
4,755,550 - MPMX20_04542 0.44 -2.8
4,755,595 - MPMX20_04542 0.49 -2.2
4,755,599 - MPMX20_04542 0.50 -0.4
4,755,638 - MPMX20_04542 0.54 -2.0
4,755,650 + MPMX20_04542 0.56 +0.3
4,755,660 + MPMX20_04542 0.57 -0.4
4,755,660 + MPMX20_04542 0.57 -3.5
4,755,668 - MPMX20_04542 0.58 -2.1
4,755,668 - MPMX20_04542 0.58 -2.4
4,755,838 - MPMX20_04542 0.78 -1.3
4,755,848 - MPMX20_04542 0.79 -3.0
4,755,853 - MPMX20_04542 0.80 +0.3
4,755,874 + MPMX20_04542 0.82 -2.3
4,755,901 + MPMX20_04542 0.85 -3.6
4,755,901 + MPMX20_04542 0.85 -0.9
4,755,906 + MPMX20_04542 0.86 +0.5
4,755,907 - MPMX20_04542 0.86 +1.6
4,755,909 - MPMX20_04542 0.86 -2.4
4,755,909 - MPMX20_04542 0.86 -0.3
4,755,914 - MPMX20_04542 0.87 +2.4
4,755,977 - -0.2
4,756,079 - -2.1
4,756,159 + -2.0
4,756,159 + -2.3
4,756,179 + -0.3
4,756,187 - -0.4
4,756,187 - +1.7
4,756,191 + +3.3
4,756,192 - -1.6
4,756,201 + MPMX20_04543 0.10 +0.9
4,756,201 + MPMX20_04543 0.10 -1.2
4,756,202 - MPMX20_04543 0.10 -3.1
4,756,204 - MPMX20_04543 0.10 -2.2
4,756,209 - MPMX20_04543 0.11 +1.6
4,756,209 - MPMX20_04543 0.11 +1.1
4,756,218 + MPMX20_04543 0.11 +0.6
4,756,226 - MPMX20_04543 0.12 -1.0
4,756,228 + MPMX20_04543 0.12 -1.1
4,756,228 + MPMX20_04543 0.12 -0.0
4,756,235 - MPMX20_04543 0.13 +0.5
4,756,236 - MPMX20_04543 0.13 -2.1
4,756,240 + MPMX20_04543 0.13 +3.7
4,756,360 + MPMX20_04543 0.21 -1.0
4,756,360 - MPMX20_04543 0.21 -0.3
4,756,388 + MPMX20_04543 0.23 +0.6
4,756,497 - MPMX20_04543 0.30 -1.1
4,756,497 - MPMX20_04543 0.30 +1.4
4,756,539 - MPMX20_04543 0.33 +1.5
4,756,568 + MPMX20_04543 0.35 +1.9
4,756,576 - MPMX20_04543 0.35 -0.4
4,756,637 - MPMX20_04543 0.39 +2.6
4,756,642 - MPMX20_04543 0.39 -0.4
4,756,676 - MPMX20_04543 0.42 +3.7
4,756,677 - MPMX20_04543 0.42 -3.1
4,756,697 - MPMX20_04543 0.43 -1.3
4,756,807 + MPMX20_04543 0.50 -2.7
4,756,913 + MPMX20_04543 0.57 -0.6
4,756,966 + MPMX20_04543 0.61 -3.0
4,756,974 - MPMX20_04543 0.61 -2.6
4,756,979 - MPMX20_04543 0.62 +1.9

Or see this region's nucleotide sequence