Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04540 and MPMX20_04541 are separated by 59 nucleotides MPMX20_04541 and MPMX20_04542 are separated by 398 nucleotides MPMX20_04542 and MPMX20_04543 are separated by 21 nucleotides
MPMX20_04540: MPMX20_04540 - Regulator of ribonuclease activity A, at 4,753,996 to 4,754,481
_04540
MPMX20_04541: MPMX20_04541 - Cell division protein ZapB, at 4,754,541 to 4,754,780
_04541
MPMX20_04542: MPMX20_04542 - Glycerol uptake facilitator protein, at 4,755,179 to 4,756,024
_04542
MPMX20_04543: MPMX20_04543 - Glycerol kinase, at 4,756,046 to 4,757,554
_04543
Position (kb)
4755
4756
4757 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4754.204 kb on + strand, within MPMX20_04540 at 4754.214 kb on + strand, within MPMX20_04540 at 4754.242 kb on + strand, within MPMX20_04540 at 4754.253 kb on + strand, within MPMX20_04540 at 4754.271 kb on + strand, within MPMX20_04540 at 4754.277 kb on - strand, within MPMX20_04540 at 4754.281 kb on + strand, within MPMX20_04540 at 4754.364 kb on - strand, within MPMX20_04540 at 4754.404 kb on + strand, within MPMX20_04540 at 4754.444 kb on + strand at 4754.522 kb on - strand at 4754.557 kb on + strand at 4754.559 kb on + strand at 4754.565 kb on - strand, within MPMX20_04541 at 4754.565 kb on - strand, within MPMX20_04541 at 4754.567 kb on - strand, within MPMX20_04541 at 4754.592 kb on + strand, within MPMX20_04541 at 4754.660 kb on - strand, within MPMX20_04541 at 4754.717 kb on + strand, within MPMX20_04541 at 4754.717 kb on + strand, within MPMX20_04541 at 4754.768 kb on + strand at 4754.799 kb on - strand at 4754.812 kb on - strand at 4754.917 kb on + strand at 4754.917 kb on + strand at 4755.187 kb on + strand at 4755.195 kb on - strand at 4755.231 kb on - strand at 4755.256 kb on + strand at 4755.291 kb on + strand, within MPMX20_04542 at 4755.316 kb on + strand, within MPMX20_04542 at 4755.354 kb on + strand, within MPMX20_04542 at 4755.354 kb on + strand, within MPMX20_04542 at 4755.374 kb on + strand, within MPMX20_04542 at 4755.374 kb on + strand, within MPMX20_04542 at 4755.382 kb on - strand, within MPMX20_04542 at 4755.382 kb on - strand, within MPMX20_04542 at 4755.442 kb on - strand, within MPMX20_04542 at 4755.534 kb on + strand, within MPMX20_04542 at 4755.542 kb on + strand, within MPMX20_04542 at 4755.550 kb on - strand, within MPMX20_04542 at 4755.595 kb on - strand, within MPMX20_04542 at 4755.599 kb on - strand, within MPMX20_04542 at 4755.638 kb on - strand, within MPMX20_04542 at 4755.650 kb on + strand, within MPMX20_04542 at 4755.660 kb on + strand, within MPMX20_04542 at 4755.660 kb on + strand, within MPMX20_04542 at 4755.668 kb on - strand, within MPMX20_04542 at 4755.668 kb on - strand, within MPMX20_04542 at 4755.838 kb on - strand, within MPMX20_04542 at 4755.848 kb on - strand, within MPMX20_04542 at 4755.853 kb on - strand, within MPMX20_04542 at 4755.874 kb on + strand, within MPMX20_04542 at 4755.901 kb on + strand, within MPMX20_04542 at 4755.901 kb on + strand, within MPMX20_04542 at 4755.906 kb on + strand, within MPMX20_04542 at 4755.907 kb on - strand, within MPMX20_04542 at 4755.909 kb on - strand, within MPMX20_04542 at 4755.909 kb on - strand, within MPMX20_04542 at 4755.914 kb on - strand, within MPMX20_04542 at 4755.977 kb on - strand at 4756.079 kb on - strand at 4756.159 kb on + strand at 4756.159 kb on + strand at 4756.179 kb on + strand at 4756.187 kb on - strand at 4756.187 kb on - strand at 4756.191 kb on + strand at 4756.192 kb on - strand at 4756.201 kb on + strand, within MPMX20_04543 at 4756.201 kb on + strand, within MPMX20_04543 at 4756.202 kb on - strand, within MPMX20_04543 at 4756.204 kb on - strand, within MPMX20_04543 at 4756.209 kb on - strand, within MPMX20_04543 at 4756.209 kb on - strand, within MPMX20_04543 at 4756.218 kb on + strand, within MPMX20_04543 at 4756.226 kb on - strand, within MPMX20_04543 at 4756.228 kb on + strand, within MPMX20_04543 at 4756.228 kb on + strand, within MPMX20_04543 at 4756.235 kb on - strand, within MPMX20_04543 at 4756.236 kb on - strand, within MPMX20_04543 at 4756.240 kb on + strand, within MPMX20_04543 at 4756.360 kb on + strand, within MPMX20_04543 at 4756.360 kb on - strand, within MPMX20_04543 at 4756.388 kb on + strand, within MPMX20_04543 at 4756.497 kb on - strand, within MPMX20_04543 at 4756.497 kb on - strand, within MPMX20_04543 at 4756.539 kb on - strand, within MPMX20_04543 at 4756.568 kb on + strand, within MPMX20_04543 at 4756.576 kb on - strand, within MPMX20_04543 at 4756.637 kb on - strand, within MPMX20_04543 at 4756.642 kb on - strand, within MPMX20_04543 at 4756.676 kb on - strand, within MPMX20_04543 at 4756.677 kb on - strand, within MPMX20_04543 at 4756.697 kb on - strand, within MPMX20_04543 at 4756.807 kb on + strand, within MPMX20_04543 at 4756.913 kb on + strand, within MPMX20_04543 at 4756.966 kb on + strand, within MPMX20_04543 at 4756.974 kb on - strand, within MPMX20_04543 at 4756.979 kb on - strand, within MPMX20_04543
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 4,754,204 + MPMX20_04540 0.43 -0.4 4,754,214 + MPMX20_04540 0.45 -0.3 4,754,242 + MPMX20_04540 0.51 -1.5 4,754,253 + MPMX20_04540 0.53 -1.4 4,754,271 + MPMX20_04540 0.57 +2.1 4,754,277 - MPMX20_04540 0.58 -2.2 4,754,281 + MPMX20_04540 0.59 -0.2 4,754,364 - MPMX20_04540 0.76 +1.1 4,754,404 + MPMX20_04540 0.84 -0.4 4,754,444 + -0.5 4,754,522 - -0.9 4,754,557 + -3.1 4,754,559 + +1.9 4,754,565 - MPMX20_04541 0.10 +2.1 4,754,565 - MPMX20_04541 0.10 -2.4 4,754,567 - MPMX20_04541 0.11 +1.5 4,754,592 + MPMX20_04541 0.21 +0.6 4,754,660 - MPMX20_04541 0.50 -2.4 4,754,717 + MPMX20_04541 0.73 -1.3 4,754,717 + MPMX20_04541 0.73 -0.8 4,754,768 + -3.6 4,754,799 - +1.7 4,754,812 - -1.9 4,754,917 + -1.6 4,754,917 + -1.4 4,755,187 + -0.4 4,755,195 - -2.3 4,755,231 - -0.4 4,755,256 + -2.8 4,755,291 + MPMX20_04542 0.13 -3.1 4,755,316 + MPMX20_04542 0.16 +3.1 4,755,354 + MPMX20_04542 0.21 +1.1 4,755,354 + MPMX20_04542 0.21 -2.3 4,755,374 + MPMX20_04542 0.23 -0.0 4,755,374 + MPMX20_04542 0.23 -2.0 4,755,382 - MPMX20_04542 0.24 -1.8 4,755,382 - MPMX20_04542 0.24 -0.3 4,755,442 - MPMX20_04542 0.31 -2.5 4,755,534 + MPMX20_04542 0.42 -1.1 4,755,542 + MPMX20_04542 0.43 +0.2 4,755,550 - MPMX20_04542 0.44 -2.8 4,755,595 - MPMX20_04542 0.49 -2.2 4,755,599 - MPMX20_04542 0.50 -0.4 4,755,638 - MPMX20_04542 0.54 -2.0 4,755,650 + MPMX20_04542 0.56 +0.3 4,755,660 + MPMX20_04542 0.57 -0.4 4,755,660 + MPMX20_04542 0.57 -3.5 4,755,668 - MPMX20_04542 0.58 -2.1 4,755,668 - MPMX20_04542 0.58 -2.4 4,755,838 - MPMX20_04542 0.78 -1.3 4,755,848 - MPMX20_04542 0.79 -3.0 4,755,853 - MPMX20_04542 0.80 +0.3 4,755,874 + MPMX20_04542 0.82 -2.3 4,755,901 + MPMX20_04542 0.85 -3.6 4,755,901 + MPMX20_04542 0.85 -0.9 4,755,906 + MPMX20_04542 0.86 +0.5 4,755,907 - MPMX20_04542 0.86 +1.6 4,755,909 - MPMX20_04542 0.86 -2.4 4,755,909 - MPMX20_04542 0.86 -0.3 4,755,914 - MPMX20_04542 0.87 +2.4 4,755,977 - -0.2 4,756,079 - -2.1 4,756,159 + -2.0 4,756,159 + -2.3 4,756,179 + -0.3 4,756,187 - -0.4 4,756,187 - +1.7 4,756,191 + +3.3 4,756,192 - -1.6 4,756,201 + MPMX20_04543 0.10 +0.9 4,756,201 + MPMX20_04543 0.10 -1.2 4,756,202 - MPMX20_04543 0.10 -3.1 4,756,204 - MPMX20_04543 0.10 -2.2 4,756,209 - MPMX20_04543 0.11 +1.6 4,756,209 - MPMX20_04543 0.11 +1.1 4,756,218 + MPMX20_04543 0.11 +0.6 4,756,226 - MPMX20_04543 0.12 -1.0 4,756,228 + MPMX20_04543 0.12 -1.1 4,756,228 + MPMX20_04543 0.12 -0.0 4,756,235 - MPMX20_04543 0.13 +0.5 4,756,236 - MPMX20_04543 0.13 -2.1 4,756,240 + MPMX20_04543 0.13 +3.7 4,756,360 + MPMX20_04543 0.21 -1.0 4,756,360 - MPMX20_04543 0.21 -0.3 4,756,388 + MPMX20_04543 0.23 +0.6 4,756,497 - MPMX20_04543 0.30 -1.1 4,756,497 - MPMX20_04543 0.30 +1.4 4,756,539 - MPMX20_04543 0.33 +1.5 4,756,568 + MPMX20_04543 0.35 +1.9 4,756,576 - MPMX20_04543 0.35 -0.4 4,756,637 - MPMX20_04543 0.39 +2.6 4,756,642 - MPMX20_04543 0.39 -0.4 4,756,676 - MPMX20_04543 0.42 +3.7 4,756,677 - MPMX20_04543 0.42 -3.1 4,756,697 - MPMX20_04543 0.43 -1.3 4,756,807 + MPMX20_04543 0.50 -2.7 4,756,913 + MPMX20_04543 0.57 -0.6 4,756,966 + MPMX20_04543 0.61 -3.0 4,756,974 - MPMX20_04543 0.61 -2.6 4,756,979 - MPMX20_04543 0.62 +1.9
Or see this region's nucleotide sequence