Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04525

Experiment: octanoate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04524 and MPMX20_04525 are separated by 63 nucleotidesMPMX20_04525 and MPMX20_04526 are separated by 128 nucleotidesMPMX20_04526 and MPMX20_04527 are separated by 12 nucleotides MPMX20_04524: MPMX20_04524 - Phosphoenolpyruvate carboxylase, at 4,732,910 to 4,735,561 _04524 MPMX20_04525: MPMX20_04525 - HTH-type transcriptional activator RhaR, at 4,735,625 to 4,736,389 _04525 MPMX20_04526: MPMX20_04526 - Fructose-6-phosphate aldolase 2, at 4,736,518 to 4,737,180 _04526 MPMX20_04527: MPMX20_04527 - Glycerol dehydrogenase, at 4,737,193 to 4,738,296 _04527 Position (kb) 4735 4736 4737Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6at 4734.640 kb on + strand, within MPMX20_04524at 4734.707 kb on - strand, within MPMX20_04524at 4734.806 kb on + strand, within MPMX20_04524at 4734.806 kb on + strand, within MPMX20_04524at 4734.806 kb on + strand, within MPMX20_04524at 4734.806 kb on + strand, within MPMX20_04524at 4734.814 kb on - strand, within MPMX20_04524at 4734.814 kb on - strand, within MPMX20_04524at 4734.814 kb on - strand, within MPMX20_04524at 4734.846 kb on + strand, within MPMX20_04524at 4734.870 kb on - strand, within MPMX20_04524at 4734.961 kb on + strand, within MPMX20_04524at 4734.980 kb on - strand, within MPMX20_04524at 4735.018 kb on - strand, within MPMX20_04524at 4735.039 kb on - strand, within MPMX20_04524at 4735.073 kb on + strand, within MPMX20_04524at 4735.073 kb on + strand, within MPMX20_04524at 4735.090 kb on - strand, within MPMX20_04524at 4735.204 kb on - strand, within MPMX20_04524at 4735.249 kb on + strand, within MPMX20_04524at 4735.293 kb on + strand, within MPMX20_04524at 4735.293 kb on + strand, within MPMX20_04524at 4735.293 kb on + strand, within MPMX20_04524at 4735.298 kb on + strandat 4735.299 kb on - strandat 4735.301 kb on - strandat 4735.392 kb on + strandat 4735.392 kb on + strandat 4735.417 kb on - strandat 4735.463 kb on - strandat 4735.546 kb on + strandat 4735.554 kb on - strandat 4735.554 kb on - strandat 4735.554 kb on - strandat 4735.556 kb on + strandat 4735.556 kb on + strandat 4735.556 kb on + strandat 4735.668 kb on - strandat 4735.668 kb on - strandat 4735.671 kb on + strandat 4735.679 kb on - strandat 4735.712 kb on - strand, within MPMX20_04525at 4735.725 kb on - strand, within MPMX20_04525at 4735.729 kb on + strand, within MPMX20_04525at 4735.835 kb on + strand, within MPMX20_04525at 4735.925 kb on - strand, within MPMX20_04525at 4736.007 kb on + strand, within MPMX20_04525at 4736.059 kb on + strand, within MPMX20_04525at 4736.059 kb on + strand, within MPMX20_04525at 4736.059 kb on + strand, within MPMX20_04525at 4736.067 kb on - strand, within MPMX20_04525at 4736.067 kb on - strand, within MPMX20_04525at 4736.067 kb on - strand, within MPMX20_04525at 4736.067 kb on - strand, within MPMX20_04525at 4736.067 kb on - strand, within MPMX20_04525at 4736.097 kb on + strand, within MPMX20_04525at 4736.105 kb on - strand, within MPMX20_04525at 4736.110 kb on - strand, within MPMX20_04525at 4736.182 kb on + strand, within MPMX20_04525at 4736.223 kb on - strand, within MPMX20_04525at 4736.234 kb on - strand, within MPMX20_04525at 4736.477 kb on + strandat 4736.477 kb on + strandat 4736.480 kb on - strandat 4736.594 kb on + strand, within MPMX20_04526at 4736.594 kb on + strand, within MPMX20_04526at 4736.623 kb on + strand, within MPMX20_04526at 4736.631 kb on + strand, within MPMX20_04526at 4736.640 kb on - strand, within MPMX20_04526at 4736.710 kb on + strand, within MPMX20_04526at 4736.710 kb on + strand, within MPMX20_04526at 4736.718 kb on - strand, within MPMX20_04526at 4736.718 kb on - strand, within MPMX20_04526at 4736.748 kb on + strand, within MPMX20_04526at 4736.792 kb on + strand, within MPMX20_04526at 4736.792 kb on + strand, within MPMX20_04526at 4736.793 kb on - strand, within MPMX20_04526at 4736.800 kb on - strand, within MPMX20_04526at 4736.842 kb on - strand, within MPMX20_04526at 4736.853 kb on - strand, within MPMX20_04526at 4736.860 kb on + strand, within MPMX20_04526at 4736.860 kb on + strand, within MPMX20_04526at 4736.868 kb on - strand, within MPMX20_04526at 4736.989 kb on + strand, within MPMX20_04526at 4737.042 kb on - strand, within MPMX20_04526at 4737.132 kb on - strandat 4737.134 kb on + strandat 4737.135 kb on + strandat 4737.168 kb on + strandat 4737.175 kb on + strandat 4737.176 kb on - strandat 4737.176 kb on - strandat 4737.190 kb on + strandat 4737.196 kb on - strandat 4737.198 kb on - strandat 4737.198 kb on - strandat 4737.198 kb on - strandat 4737.198 kb on - strandat 4737.198 kb on - strandat 4737.198 kb on - strandat 4737.229 kb on - strandat 4737.241 kb on + strandat 4737.249 kb on - strandat 4737.325 kb on - strand, within MPMX20_04527

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Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
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4,734,640 + MPMX20_04524 0.65 -1.0
4,734,707 - MPMX20_04524 0.68 -1.4
4,734,806 + MPMX20_04524 0.71 +1.8
4,734,806 + MPMX20_04524 0.71 -0.4
4,734,806 + MPMX20_04524 0.71 -0.8
4,734,806 + MPMX20_04524 0.71 -0.8
4,734,814 - MPMX20_04524 0.72 +0.9
4,734,814 - MPMX20_04524 0.72 -2.5
4,734,814 - MPMX20_04524 0.72 -2.7
4,734,846 + MPMX20_04524 0.73 +1.1
4,734,870 - MPMX20_04524 0.74 +0.1
4,734,961 + MPMX20_04524 0.77 -2.2
4,734,980 - MPMX20_04524 0.78 -1.1
4,735,018 - MPMX20_04524 0.79 -2.6
4,735,039 - MPMX20_04524 0.80 +2.5
4,735,073 + MPMX20_04524 0.82 -0.0
4,735,073 + MPMX20_04524 0.82 +1.5
4,735,090 - MPMX20_04524 0.82 -1.1
4,735,204 - MPMX20_04524 0.87 +0.6
4,735,249 + MPMX20_04524 0.88 +2.1
4,735,293 + MPMX20_04524 0.90 -3.2
4,735,293 + MPMX20_04524 0.90 -0.9
4,735,293 + MPMX20_04524 0.90 -2.8
4,735,298 + -1.3
4,735,299 - +3.2
4,735,301 - -2.4
4,735,392 + +0.7
4,735,392 + -1.9
4,735,417 - -2.6
4,735,463 - +3.0
4,735,546 + +1.1
4,735,554 - -0.3
4,735,554 - -2.4
4,735,554 - -1.1
4,735,556 + -2.8
4,735,556 + -1.4
4,735,556 + -2.4
4,735,668 - -1.4
4,735,668 - +0.9
4,735,671 + +2.6
4,735,679 - +2.5
4,735,712 - MPMX20_04525 0.11 +0.4
4,735,725 - MPMX20_04525 0.13 +2.9
4,735,729 + MPMX20_04525 0.14 +0.8
4,735,835 + MPMX20_04525 0.27 +2.9
4,735,925 - MPMX20_04525 0.39 +0.6
4,736,007 + MPMX20_04525 0.50 -2.9
4,736,059 + MPMX20_04525 0.57 +1.9
4,736,059 + MPMX20_04525 0.57 -1.4
4,736,059 + MPMX20_04525 0.57 +2.7
4,736,067 - MPMX20_04525 0.58 +3.2
4,736,067 - MPMX20_04525 0.58 -1.2
4,736,067 - MPMX20_04525 0.58 -2.9
4,736,067 - MPMX20_04525 0.58 +3.2
4,736,067 - MPMX20_04525 0.58 +2.0
4,736,097 + MPMX20_04525 0.62 -1.8
4,736,105 - MPMX20_04525 0.63 -0.3
4,736,110 - MPMX20_04525 0.63 +0.7
4,736,182 + MPMX20_04525 0.73 +3.0
4,736,223 - MPMX20_04525 0.78 +2.1
4,736,234 - MPMX20_04525 0.80 -0.8
4,736,477 + +0.0
4,736,477 + -2.7
4,736,480 - +1.1
4,736,594 + MPMX20_04526 0.11 -1.5
4,736,594 + MPMX20_04526 0.11 -1.2
4,736,623 + MPMX20_04526 0.16 -0.9
4,736,631 + MPMX20_04526 0.17 -1.9
4,736,640 - MPMX20_04526 0.18 +0.1
4,736,710 + MPMX20_04526 0.29 +1.2
4,736,710 + MPMX20_04526 0.29 -0.0
4,736,718 - MPMX20_04526 0.30 -1.0
4,736,718 - MPMX20_04526 0.30 +0.4
4,736,748 + MPMX20_04526 0.35 +1.6
4,736,792 + MPMX20_04526 0.41 -1.9
4,736,792 + MPMX20_04526 0.41 +0.3
4,736,793 - MPMX20_04526 0.41 +1.2
4,736,800 - MPMX20_04526 0.43 +1.9
4,736,842 - MPMX20_04526 0.49 +1.1
4,736,853 - MPMX20_04526 0.51 -2.3
4,736,860 + MPMX20_04526 0.52 -1.6
4,736,860 + MPMX20_04526 0.52 +6.0
4,736,868 - MPMX20_04526 0.53 -0.3
4,736,989 + MPMX20_04526 0.71 -0.6
4,737,042 - MPMX20_04526 0.79 -0.3
4,737,132 - +2.1
4,737,134 + +2.4
4,737,135 + +1.6
4,737,168 + +0.3
4,737,175 + -1.6
4,737,176 - +0.7
4,737,176 - +1.8
4,737,190 + +1.6
4,737,196 - +2.1
4,737,198 - -1.9
4,737,198 - -0.1
4,737,198 - -0.6
4,737,198 - +1.1
4,737,198 - -2.0
4,737,198 - +0.9
4,737,229 - -2.4
4,737,241 + +1.2
4,737,249 - +1.8
4,737,325 - MPMX20_04527 0.12 -0.7

Or see this region's nucleotide sequence