Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04383 and MPMX20_04384 are separated by 4 nucleotides MPMX20_04384 and MPMX20_04385 are separated by 240 nucleotides MPMX20_04385 and MPMX20_04386 are separated by 45 nucleotides
MPMX20_04383: MPMX20_04383 - 3-oxoacyl-[acyl-carrier-protein] reductase FabG, at 4,574,178 to 4,574,972
_04383
MPMX20_04384: MPMX20_04384 - hypothetical protein, at 4,574,977 to 4,575,504
_04384
MPMX20_04385: MPMX20_04385 - hypothetical protein, at 4,575,745 to 4,576,407
_04385
MPMX20_04386: MPMX20_04386 - Putative membrane-bound redox modulator Alx, at 4,576,453 to 4,577,481
_04386
Position (kb)
4575
4576
4577 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 4574.842 kb on + strand, within MPMX20_04383 at 4574.842 kb on + strand, within MPMX20_04383 at 4574.850 kb on - strand, within MPMX20_04383 at 4574.888 kb on + strand, within MPMX20_04383 at 4574.889 kb on + strand, within MPMX20_04383 at 4574.889 kb on + strand, within MPMX20_04383 at 4574.904 kb on + strand at 4574.904 kb on + strand at 4574.904 kb on + strand at 4574.904 kb on + strand at 4574.904 kb on + strand at 4574.904 kb on + strand at 4574.912 kb on - strand at 4574.912 kb on - strand at 4574.912 kb on - strand at 4574.912 kb on - strand at 4574.982 kb on - strand at 4574.989 kb on + strand at 4575.008 kb on + strand at 4575.008 kb on + strand at 4575.008 kb on + strand at 4575.050 kb on - strand, within MPMX20_04384 at 4575.108 kb on - strand, within MPMX20_04384 at 4575.115 kb on + strand, within MPMX20_04384 at 4575.128 kb on - strand, within MPMX20_04384 at 4575.129 kb on - strand, within MPMX20_04384 at 4575.129 kb on - strand, within MPMX20_04384 at 4575.174 kb on - strand, within MPMX20_04384 at 4575.174 kb on - strand, within MPMX20_04384 at 4575.226 kb on - strand, within MPMX20_04384 at 4575.258 kb on + strand, within MPMX20_04384 at 4575.266 kb on - strand, within MPMX20_04384 at 4575.271 kb on - strand, within MPMX20_04384 at 4575.290 kb on - strand, within MPMX20_04384 at 4575.290 kb on - strand, within MPMX20_04384 at 4575.338 kb on - strand, within MPMX20_04384 at 4575.435 kb on + strand, within MPMX20_04384 at 4575.435 kb on + strand, within MPMX20_04384 at 4575.435 kb on + strand, within MPMX20_04384 at 4575.443 kb on - strand, within MPMX20_04384 at 4575.485 kb on - strand at 4575.543 kb on + strand at 4575.594 kb on - strand at 4575.690 kb on - strand at 4575.691 kb on + strand at 4575.691 kb on + strand at 4575.691 kb on + strand at 4575.691 kb on + strand at 4575.691 kb on + strand at 4575.691 kb on + strand at 4575.691 kb on + strand at 4575.691 kb on + strand at 4575.691 kb on + strand at 4575.699 kb on - strand at 4575.699 kb on - strand at 4575.699 kb on - strand at 4575.699 kb on - strand at 4575.699 kb on - strand at 4575.699 kb on - strand at 4575.699 kb on - strand at 4575.774 kb on + strand at 4575.775 kb on + strand at 4575.779 kb on + strand at 4575.790 kb on + strand at 4575.802 kb on - strand at 4575.831 kb on - strand, within MPMX20_04385 at 4575.833 kb on + strand, within MPMX20_04385 at 4575.841 kb on - strand, within MPMX20_04385 at 4575.891 kb on + strand, within MPMX20_04385 at 4575.898 kb on + strand, within MPMX20_04385 at 4575.898 kb on + strand, within MPMX20_04385 at 4575.898 kb on + strand, within MPMX20_04385 at 4575.900 kb on - strand, within MPMX20_04385 at 4575.900 kb on - strand, within MPMX20_04385 at 4575.906 kb on - strand, within MPMX20_04385 at 4575.906 kb on - strand, within MPMX20_04385 at 4575.906 kb on - strand, within MPMX20_04385 at 4575.907 kb on + strand, within MPMX20_04385 at 4575.907 kb on + strand, within MPMX20_04385 at 4575.960 kb on + strand, within MPMX20_04385 at 4575.993 kb on - strand, within MPMX20_04385 at 4575.993 kb on - strand, within MPMX20_04385 at 4576.043 kb on - strand, within MPMX20_04385 at 4576.080 kb on + strand, within MPMX20_04385 at 4576.099 kb on + strand, within MPMX20_04385 at 4576.145 kb on - strand, within MPMX20_04385 at 4576.165 kb on - strand, within MPMX20_04385 at 4576.237 kb on + strand, within MPMX20_04385 at 4576.237 kb on + strand, within MPMX20_04385 at 4576.245 kb on - strand, within MPMX20_04385 at 4576.245 kb on - strand, within MPMX20_04385 at 4576.283 kb on + strand, within MPMX20_04385 at 4576.283 kb on + strand, within MPMX20_04385 at 4576.283 kb on + strand, within MPMX20_04385 at 4576.291 kb on - strand, within MPMX20_04385 at 4576.291 kb on - strand, within MPMX20_04385 at 4576.291 kb on - strand, within MPMX20_04385 at 4576.327 kb on - strand, within MPMX20_04385 at 4576.327 kb on - strand, within MPMX20_04385 at 4576.329 kb on + strand, within MPMX20_04385 at 4576.370 kb on - strand at 4576.403 kb on + strand at 4576.409 kb on - strand at 4576.411 kb on - strand at 4576.472 kb on + strand at 4576.550 kb on - strand at 4576.602 kb on + strand, within MPMX20_04386 at 4576.676 kb on - strand, within MPMX20_04386 at 4576.681 kb on - strand, within MPMX20_04386 at 4576.707 kb on + strand, within MPMX20_04386 at 4576.715 kb on - strand, within MPMX20_04386 at 4576.715 kb on - strand, within MPMX20_04386 at 4576.790 kb on - strand, within MPMX20_04386 at 4576.834 kb on - strand, within MPMX20_04386 at 4576.900 kb on - strand, within MPMX20_04386 at 4576.914 kb on + strand, within MPMX20_04386 at 4576.922 kb on - strand, within MPMX20_04386 at 4576.922 kb on - strand, within MPMX20_04386 at 4576.949 kb on + strand, within MPMX20_04386 at 4576.949 kb on + strand, within MPMX20_04386 at 4576.949 kb on + strand, within MPMX20_04386 at 4576.957 kb on - strand, within MPMX20_04386 at 4576.957 kb on - strand, within MPMX20_04386 at 4576.978 kb on - strand, within MPMX20_04386 at 4577.013 kb on + strand, within MPMX20_04386 at 4577.032 kb on + strand, within MPMX20_04386 at 4577.078 kb on - strand, within MPMX20_04386 at 4577.082 kb on + strand, within MPMX20_04386 at 4577.090 kb on - strand, within MPMX20_04386 at 4577.150 kb on + strand, within MPMX20_04386 at 4577.156 kb on - strand, within MPMX20_04386 at 4577.158 kb on - strand, within MPMX20_04386 at 4577.158 kb on - strand, within MPMX20_04386 at 4577.163 kb on - strand, within MPMX20_04386 at 4577.195 kb on - strand, within MPMX20_04386 at 4577.213 kb on + strand, within MPMX20_04386 at 4577.258 kb on - strand, within MPMX20_04386 at 4577.261 kb on + strand, within MPMX20_04386 at 4577.271 kb on + strand, within MPMX20_04386 at 4577.275 kb on + strand, within MPMX20_04386 at 4577.283 kb on - strand, within MPMX20_04386 at 4577.333 kb on + strand, within MPMX20_04386 at 4577.341 kb on - strand, within MPMX20_04386
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 4,574,842 + MPMX20_04383 0.84 +0.9 4,574,842 + MPMX20_04383 0.84 -3.9 4,574,850 - MPMX20_04383 0.85 -3.1 4,574,888 + MPMX20_04383 0.89 +4.0 4,574,889 + MPMX20_04383 0.89 -0.8 4,574,889 + MPMX20_04383 0.89 +2.4 4,574,904 + -3.4 4,574,904 + -0.9 4,574,904 + +1.3 4,574,904 + +0.6 4,574,904 + +2.3 4,574,904 + +0.3 4,574,912 - -3.2 4,574,912 - -0.4 4,574,912 - -2.8 4,574,912 - -2.7 4,574,982 - +1.7 4,574,989 + -1.6 4,575,008 + +2.2 4,575,008 + -0.1 4,575,008 + +0.1 4,575,050 - MPMX20_04384 0.14 +1.4 4,575,108 - MPMX20_04384 0.25 +3.1 4,575,115 + MPMX20_04384 0.26 -1.9 4,575,128 - MPMX20_04384 0.29 -1.9 4,575,129 - MPMX20_04384 0.29 -3.8 4,575,129 - MPMX20_04384 0.29 -0.4 4,575,174 - MPMX20_04384 0.37 -2.7 4,575,174 - MPMX20_04384 0.37 -0.4 4,575,226 - MPMX20_04384 0.47 +2.8 4,575,258 + MPMX20_04384 0.53 -2.3 4,575,266 - MPMX20_04384 0.55 +0.5 4,575,271 - MPMX20_04384 0.56 +0.6 4,575,290 - MPMX20_04384 0.59 -1.2 4,575,290 - MPMX20_04384 0.59 +3.3 4,575,338 - MPMX20_04384 0.68 -2.1 4,575,435 + MPMX20_04384 0.87 +1.3 4,575,435 + MPMX20_04384 0.87 +0.6 4,575,435 + MPMX20_04384 0.87 +0.4 4,575,443 - MPMX20_04384 0.88 -3.2 4,575,485 - +2.3 4,575,543 + -1.7 4,575,594 - +0.8 4,575,690 - -3.5 4,575,691 + -1.1 4,575,691 + +0.1 4,575,691 + +1.4 4,575,691 + +0.0 4,575,691 + +0.9 4,575,691 + -1.3 4,575,691 + -2.1 4,575,691 + -0.4 4,575,691 + -2.7 4,575,699 - -2.6 4,575,699 - -1.8 4,575,699 - -0.1 4,575,699 - -3.4 4,575,699 - +1.3 4,575,699 - -3.8 4,575,699 - -2.5 4,575,774 + +1.3 4,575,775 + +1.6 4,575,779 + -2.5 4,575,790 + -0.4 4,575,802 - -1.7 4,575,831 - MPMX20_04385 0.13 +1.7 4,575,833 + MPMX20_04385 0.13 -1.9 4,575,841 - MPMX20_04385 0.14 -2.0 4,575,891 + MPMX20_04385 0.22 +0.8 4,575,898 + MPMX20_04385 0.23 -2.0 4,575,898 + MPMX20_04385 0.23 +1.4 4,575,898 + MPMX20_04385 0.23 -1.6 4,575,900 - MPMX20_04385 0.23 -2.8 4,575,900 - MPMX20_04385 0.23 -1.2 4,575,906 - MPMX20_04385 0.24 +0.1 4,575,906 - MPMX20_04385 0.24 -1.2 4,575,906 - MPMX20_04385 0.24 +1.5 4,575,907 + MPMX20_04385 0.24 -2.7 4,575,907 + MPMX20_04385 0.24 -2.1 4,575,960 + MPMX20_04385 0.32 -0.7 4,575,993 - MPMX20_04385 0.37 -0.2 4,575,993 - MPMX20_04385 0.37 -3.2 4,576,043 - MPMX20_04385 0.45 +2.6 4,576,080 + MPMX20_04385 0.51 -2.1 4,576,099 + MPMX20_04385 0.53 -0.8 4,576,145 - MPMX20_04385 0.60 -0.1 4,576,165 - MPMX20_04385 0.63 -2.0 4,576,237 + MPMX20_04385 0.74 -0.5 4,576,237 + MPMX20_04385 0.74 -2.2 4,576,245 - MPMX20_04385 0.75 -0.8 4,576,245 - MPMX20_04385 0.75 +0.1 4,576,283 + MPMX20_04385 0.81 -2.2 4,576,283 + MPMX20_04385 0.81 +0.9 4,576,283 + MPMX20_04385 0.81 -0.9 4,576,291 - MPMX20_04385 0.82 -1.0 4,576,291 - MPMX20_04385 0.82 +0.3 4,576,291 - MPMX20_04385 0.82 +0.8 4,576,327 - MPMX20_04385 0.88 -2.0 4,576,327 - MPMX20_04385 0.88 -0.7 4,576,329 + MPMX20_04385 0.88 -2.8 4,576,370 - -0.5 4,576,403 + +0.3 4,576,409 - +1.9 4,576,411 - +0.1 4,576,472 + +0.8 4,576,550 - +0.9 4,576,602 + MPMX20_04386 0.14 -1.0 4,576,676 - MPMX20_04386 0.22 +1.6 4,576,681 - MPMX20_04386 0.22 +1.0 4,576,707 + MPMX20_04386 0.25 -3.3 4,576,715 - MPMX20_04386 0.25 -3.0 4,576,715 - MPMX20_04386 0.25 -1.2 4,576,790 - MPMX20_04386 0.33 -0.2 4,576,834 - MPMX20_04386 0.37 +0.8 4,576,900 - MPMX20_04386 0.43 +1.1 4,576,914 + MPMX20_04386 0.45 +0.1 4,576,922 - MPMX20_04386 0.46 +2.5 4,576,922 - MPMX20_04386 0.46 -0.8 4,576,949 + MPMX20_04386 0.48 -0.5 4,576,949 + MPMX20_04386 0.48 -3.7 4,576,949 + MPMX20_04386 0.48 -0.7 4,576,957 - MPMX20_04386 0.49 +1.6 4,576,957 - MPMX20_04386 0.49 +0.3 4,576,978 - MPMX20_04386 0.51 +1.6 4,577,013 + MPMX20_04386 0.54 +0.1 4,577,032 + MPMX20_04386 0.56 +2.1 4,577,078 - MPMX20_04386 0.61 +0.7 4,577,082 + MPMX20_04386 0.61 +0.9 4,577,090 - MPMX20_04386 0.62 -3.4 4,577,150 + MPMX20_04386 0.68 -1.7 4,577,156 - MPMX20_04386 0.68 +1.6 4,577,158 - MPMX20_04386 0.69 +1.8 4,577,158 - MPMX20_04386 0.69 -0.6 4,577,163 - MPMX20_04386 0.69 +1.9 4,577,195 - MPMX20_04386 0.72 +0.6 4,577,213 + MPMX20_04386 0.74 -0.1 4,577,258 - MPMX20_04386 0.78 -0.1 4,577,261 + MPMX20_04386 0.79 +1.3 4,577,271 + MPMX20_04386 0.79 +2.3 4,577,275 + MPMX20_04386 0.80 -3.6 4,577,283 - MPMX20_04386 0.81 -0.4 4,577,333 + MPMX20_04386 0.86 +1.6 4,577,341 - MPMX20_04386 0.86 -1.4
Or see this region's nucleotide sequence