Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04385

Experiment: octanoate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04383 and MPMX20_04384 are separated by 4 nucleotidesMPMX20_04384 and MPMX20_04385 are separated by 240 nucleotidesMPMX20_04385 and MPMX20_04386 are separated by 45 nucleotides MPMX20_04383: MPMX20_04383 - 3-oxoacyl-[acyl-carrier-protein] reductase FabG, at 4,574,178 to 4,574,972 _04383 MPMX20_04384: MPMX20_04384 - hypothetical protein, at 4,574,977 to 4,575,504 _04384 MPMX20_04385: MPMX20_04385 - hypothetical protein, at 4,575,745 to 4,576,407 _04385 MPMX20_04386: MPMX20_04386 - Putative membrane-bound redox modulator Alx, at 4,576,453 to 4,577,481 _04386 Position (kb) 4575 4576 4577Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 4574.842 kb on + strand, within MPMX20_04383at 4574.842 kb on + strand, within MPMX20_04383at 4574.850 kb on - strand, within MPMX20_04383at 4574.888 kb on + strand, within MPMX20_04383at 4574.889 kb on + strand, within MPMX20_04383at 4574.889 kb on + strand, within MPMX20_04383at 4574.904 kb on + strandat 4574.904 kb on + strandat 4574.904 kb on + strandat 4574.904 kb on + strandat 4574.904 kb on + strandat 4574.904 kb on + strandat 4574.912 kb on - strandat 4574.912 kb on - strandat 4574.912 kb on - strandat 4574.912 kb on - strandat 4574.982 kb on - strandat 4574.989 kb on + strandat 4575.008 kb on + strandat 4575.008 kb on + strandat 4575.008 kb on + strandat 4575.050 kb on - strand, within MPMX20_04384at 4575.108 kb on - strand, within MPMX20_04384at 4575.115 kb on + strand, within MPMX20_04384at 4575.128 kb on - strand, within MPMX20_04384at 4575.129 kb on - strand, within MPMX20_04384at 4575.129 kb on - strand, within MPMX20_04384at 4575.174 kb on - strand, within MPMX20_04384at 4575.174 kb on - strand, within MPMX20_04384at 4575.226 kb on - strand, within MPMX20_04384at 4575.258 kb on + strand, within MPMX20_04384at 4575.266 kb on - strand, within MPMX20_04384at 4575.271 kb on - strand, within MPMX20_04384at 4575.290 kb on - strand, within MPMX20_04384at 4575.290 kb on - strand, within MPMX20_04384at 4575.338 kb on - strand, within MPMX20_04384at 4575.435 kb on + strand, within MPMX20_04384at 4575.435 kb on + strand, within MPMX20_04384at 4575.435 kb on + strand, within MPMX20_04384at 4575.443 kb on - strand, within MPMX20_04384at 4575.485 kb on - strandat 4575.543 kb on + strandat 4575.594 kb on - strandat 4575.690 kb on - strandat 4575.691 kb on + strandat 4575.691 kb on + strandat 4575.691 kb on + strandat 4575.691 kb on + strandat 4575.691 kb on + strandat 4575.691 kb on + strandat 4575.691 kb on + strandat 4575.691 kb on + strandat 4575.691 kb on + strandat 4575.699 kb on - strandat 4575.699 kb on - strandat 4575.699 kb on - strandat 4575.699 kb on - strandat 4575.699 kb on - strandat 4575.699 kb on - strandat 4575.699 kb on - strandat 4575.774 kb on + strandat 4575.775 kb on + strandat 4575.779 kb on + strandat 4575.790 kb on + strandat 4575.802 kb on - strandat 4575.831 kb on - strand, within MPMX20_04385at 4575.833 kb on + strand, within MPMX20_04385at 4575.841 kb on - strand, within MPMX20_04385at 4575.891 kb on + strand, within MPMX20_04385at 4575.898 kb on + strand, within MPMX20_04385at 4575.898 kb on + strand, within MPMX20_04385at 4575.898 kb on + strand, within MPMX20_04385at 4575.900 kb on - strand, within MPMX20_04385at 4575.900 kb on - strand, within MPMX20_04385at 4575.906 kb on - strand, within MPMX20_04385at 4575.906 kb on - strand, within MPMX20_04385at 4575.906 kb on - strand, within MPMX20_04385at 4575.907 kb on + strand, within MPMX20_04385at 4575.907 kb on + strand, within MPMX20_04385at 4575.960 kb on + strand, within MPMX20_04385at 4575.993 kb on - strand, within MPMX20_04385at 4575.993 kb on - strand, within MPMX20_04385at 4576.043 kb on - strand, within MPMX20_04385at 4576.080 kb on + strand, within MPMX20_04385at 4576.099 kb on + strand, within MPMX20_04385at 4576.145 kb on - strand, within MPMX20_04385at 4576.165 kb on - strand, within MPMX20_04385at 4576.237 kb on + strand, within MPMX20_04385at 4576.237 kb on + strand, within MPMX20_04385at 4576.245 kb on - strand, within MPMX20_04385at 4576.245 kb on - strand, within MPMX20_04385at 4576.283 kb on + strand, within MPMX20_04385at 4576.283 kb on + strand, within MPMX20_04385at 4576.283 kb on + strand, within MPMX20_04385at 4576.291 kb on - strand, within MPMX20_04385at 4576.291 kb on - strand, within MPMX20_04385at 4576.291 kb on - strand, within MPMX20_04385at 4576.327 kb on - strand, within MPMX20_04385at 4576.327 kb on - strand, within MPMX20_04385at 4576.329 kb on + strand, within MPMX20_04385at 4576.370 kb on - strandat 4576.403 kb on + strandat 4576.409 kb on - strandat 4576.411 kb on - strandat 4576.472 kb on + strandat 4576.550 kb on - strandat 4576.602 kb on + strand, within MPMX20_04386at 4576.676 kb on - strand, within MPMX20_04386at 4576.681 kb on - strand, within MPMX20_04386at 4576.707 kb on + strand, within MPMX20_04386at 4576.715 kb on - strand, within MPMX20_04386at 4576.715 kb on - strand, within MPMX20_04386at 4576.790 kb on - strand, within MPMX20_04386at 4576.834 kb on - strand, within MPMX20_04386at 4576.900 kb on - strand, within MPMX20_04386at 4576.914 kb on + strand, within MPMX20_04386at 4576.922 kb on - strand, within MPMX20_04386at 4576.922 kb on - strand, within MPMX20_04386at 4576.949 kb on + strand, within MPMX20_04386at 4576.949 kb on + strand, within MPMX20_04386at 4576.949 kb on + strand, within MPMX20_04386at 4576.957 kb on - strand, within MPMX20_04386at 4576.957 kb on - strand, within MPMX20_04386at 4576.978 kb on - strand, within MPMX20_04386at 4577.013 kb on + strand, within MPMX20_04386at 4577.032 kb on + strand, within MPMX20_04386at 4577.078 kb on - strand, within MPMX20_04386at 4577.082 kb on + strand, within MPMX20_04386at 4577.090 kb on - strand, within MPMX20_04386at 4577.150 kb on + strand, within MPMX20_04386at 4577.156 kb on - strand, within MPMX20_04386at 4577.158 kb on - strand, within MPMX20_04386at 4577.158 kb on - strand, within MPMX20_04386at 4577.163 kb on - strand, within MPMX20_04386at 4577.195 kb on - strand, within MPMX20_04386at 4577.213 kb on + strand, within MPMX20_04386at 4577.258 kb on - strand, within MPMX20_04386at 4577.261 kb on + strand, within MPMX20_04386at 4577.271 kb on + strand, within MPMX20_04386at 4577.275 kb on + strand, within MPMX20_04386at 4577.283 kb on - strand, within MPMX20_04386at 4577.333 kb on + strand, within MPMX20_04386at 4577.341 kb on - strand, within MPMX20_04386

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Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
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4,574,842 + MPMX20_04383 0.84 +0.9
4,574,842 + MPMX20_04383 0.84 -3.9
4,574,850 - MPMX20_04383 0.85 -3.1
4,574,888 + MPMX20_04383 0.89 +4.0
4,574,889 + MPMX20_04383 0.89 -0.8
4,574,889 + MPMX20_04383 0.89 +2.4
4,574,904 + -3.4
4,574,904 + -0.9
4,574,904 + +1.3
4,574,904 + +0.6
4,574,904 + +2.3
4,574,904 + +0.3
4,574,912 - -3.2
4,574,912 - -0.4
4,574,912 - -2.8
4,574,912 - -2.7
4,574,982 - +1.7
4,574,989 + -1.6
4,575,008 + +2.2
4,575,008 + -0.1
4,575,008 + +0.1
4,575,050 - MPMX20_04384 0.14 +1.4
4,575,108 - MPMX20_04384 0.25 +3.1
4,575,115 + MPMX20_04384 0.26 -1.9
4,575,128 - MPMX20_04384 0.29 -1.9
4,575,129 - MPMX20_04384 0.29 -3.8
4,575,129 - MPMX20_04384 0.29 -0.4
4,575,174 - MPMX20_04384 0.37 -2.7
4,575,174 - MPMX20_04384 0.37 -0.4
4,575,226 - MPMX20_04384 0.47 +2.8
4,575,258 + MPMX20_04384 0.53 -2.3
4,575,266 - MPMX20_04384 0.55 +0.5
4,575,271 - MPMX20_04384 0.56 +0.6
4,575,290 - MPMX20_04384 0.59 -1.2
4,575,290 - MPMX20_04384 0.59 +3.3
4,575,338 - MPMX20_04384 0.68 -2.1
4,575,435 + MPMX20_04384 0.87 +1.3
4,575,435 + MPMX20_04384 0.87 +0.6
4,575,435 + MPMX20_04384 0.87 +0.4
4,575,443 - MPMX20_04384 0.88 -3.2
4,575,485 - +2.3
4,575,543 + -1.7
4,575,594 - +0.8
4,575,690 - -3.5
4,575,691 + -1.1
4,575,691 + +0.1
4,575,691 + +1.4
4,575,691 + +0.0
4,575,691 + +0.9
4,575,691 + -1.3
4,575,691 + -2.1
4,575,691 + -0.4
4,575,691 + -2.7
4,575,699 - -2.6
4,575,699 - -1.8
4,575,699 - -0.1
4,575,699 - -3.4
4,575,699 - +1.3
4,575,699 - -3.8
4,575,699 - -2.5
4,575,774 + +1.3
4,575,775 + +1.6
4,575,779 + -2.5
4,575,790 + -0.4
4,575,802 - -1.7
4,575,831 - MPMX20_04385 0.13 +1.7
4,575,833 + MPMX20_04385 0.13 -1.9
4,575,841 - MPMX20_04385 0.14 -2.0
4,575,891 + MPMX20_04385 0.22 +0.8
4,575,898 + MPMX20_04385 0.23 -2.0
4,575,898 + MPMX20_04385 0.23 +1.4
4,575,898 + MPMX20_04385 0.23 -1.6
4,575,900 - MPMX20_04385 0.23 -2.8
4,575,900 - MPMX20_04385 0.23 -1.2
4,575,906 - MPMX20_04385 0.24 +0.1
4,575,906 - MPMX20_04385 0.24 -1.2
4,575,906 - MPMX20_04385 0.24 +1.5
4,575,907 + MPMX20_04385 0.24 -2.7
4,575,907 + MPMX20_04385 0.24 -2.1
4,575,960 + MPMX20_04385 0.32 -0.7
4,575,993 - MPMX20_04385 0.37 -0.2
4,575,993 - MPMX20_04385 0.37 -3.2
4,576,043 - MPMX20_04385 0.45 +2.6
4,576,080 + MPMX20_04385 0.51 -2.1
4,576,099 + MPMX20_04385 0.53 -0.8
4,576,145 - MPMX20_04385 0.60 -0.1
4,576,165 - MPMX20_04385 0.63 -2.0
4,576,237 + MPMX20_04385 0.74 -0.5
4,576,237 + MPMX20_04385 0.74 -2.2
4,576,245 - MPMX20_04385 0.75 -0.8
4,576,245 - MPMX20_04385 0.75 +0.1
4,576,283 + MPMX20_04385 0.81 -2.2
4,576,283 + MPMX20_04385 0.81 +0.9
4,576,283 + MPMX20_04385 0.81 -0.9
4,576,291 - MPMX20_04385 0.82 -1.0
4,576,291 - MPMX20_04385 0.82 +0.3
4,576,291 - MPMX20_04385 0.82 +0.8
4,576,327 - MPMX20_04385 0.88 -2.0
4,576,327 - MPMX20_04385 0.88 -0.7
4,576,329 + MPMX20_04385 0.88 -2.8
4,576,370 - -0.5
4,576,403 + +0.3
4,576,409 - +1.9
4,576,411 - +0.1
4,576,472 + +0.8
4,576,550 - +0.9
4,576,602 + MPMX20_04386 0.14 -1.0
4,576,676 - MPMX20_04386 0.22 +1.6
4,576,681 - MPMX20_04386 0.22 +1.0
4,576,707 + MPMX20_04386 0.25 -3.3
4,576,715 - MPMX20_04386 0.25 -3.0
4,576,715 - MPMX20_04386 0.25 -1.2
4,576,790 - MPMX20_04386 0.33 -0.2
4,576,834 - MPMX20_04386 0.37 +0.8
4,576,900 - MPMX20_04386 0.43 +1.1
4,576,914 + MPMX20_04386 0.45 +0.1
4,576,922 - MPMX20_04386 0.46 +2.5
4,576,922 - MPMX20_04386 0.46 -0.8
4,576,949 + MPMX20_04386 0.48 -0.5
4,576,949 + MPMX20_04386 0.48 -3.7
4,576,949 + MPMX20_04386 0.48 -0.7
4,576,957 - MPMX20_04386 0.49 +1.6
4,576,957 - MPMX20_04386 0.49 +0.3
4,576,978 - MPMX20_04386 0.51 +1.6
4,577,013 + MPMX20_04386 0.54 +0.1
4,577,032 + MPMX20_04386 0.56 +2.1
4,577,078 - MPMX20_04386 0.61 +0.7
4,577,082 + MPMX20_04386 0.61 +0.9
4,577,090 - MPMX20_04386 0.62 -3.4
4,577,150 + MPMX20_04386 0.68 -1.7
4,577,156 - MPMX20_04386 0.68 +1.6
4,577,158 - MPMX20_04386 0.69 +1.8
4,577,158 - MPMX20_04386 0.69 -0.6
4,577,163 - MPMX20_04386 0.69 +1.9
4,577,195 - MPMX20_04386 0.72 +0.6
4,577,213 + MPMX20_04386 0.74 -0.1
4,577,258 - MPMX20_04386 0.78 -0.1
4,577,261 + MPMX20_04386 0.79 +1.3
4,577,271 + MPMX20_04386 0.79 +2.3
4,577,275 + MPMX20_04386 0.80 -3.6
4,577,283 - MPMX20_04386 0.81 -0.4
4,577,333 + MPMX20_04386 0.86 +1.6
4,577,341 - MPMX20_04386 0.86 -1.4

Or see this region's nucleotide sequence