Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04325

Experiment: octanoate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04323 and MPMX20_04324 are separated by 124 nucleotidesMPMX20_04324 and MPMX20_04325 overlap by 20 nucleotidesMPMX20_04325 and MPMX20_04326 overlap by 4 nucleotides MPMX20_04323: MPMX20_04323 - Glutathione hydrolase proenzyme, at 4,517,287 to 4,519,032 _04323 MPMX20_04324: MPMX20_04324 - putative protein YhhA, at 4,519,157 to 4,519,543 _04324 MPMX20_04325: MPMX20_04325 - Glycerophosphodiester phosphodiesterase, cytoplasmic, at 4,519,524 to 4,520,273 _04325 MPMX20_04326: MPMX20_04326 - sn-glycerol-3-phosphate import ATP-binding protein UgpC, at 4,520,270 to 4,521,340 _04326 Position (kb) 4519 4520 4521Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 4518.680 kb on - strand, within MPMX20_04323at 4518.780 kb on - strand, within MPMX20_04323at 4518.791 kb on - strand, within MPMX20_04323at 4518.816 kb on + strand, within MPMX20_04323at 4518.849 kb on + strand, within MPMX20_04323at 4518.878 kb on + strandat 4518.878 kb on + strandat 4518.878 kb on + strandat 4518.883 kb on + strandat 4518.886 kb on - strandat 4518.886 kb on - strandat 4518.974 kb on - strandat 4518.999 kb on + strandat 4518.999 kb on + strandat 4519.007 kb on - strandat 4519.007 kb on - strandat 4519.067 kb on + strandat 4519.068 kb on - strandat 4519.075 kb on - strandat 4519.078 kb on + strandat 4519.078 kb on + strandat 4519.078 kb on + strandat 4519.131 kb on - strandat 4519.131 kb on - strandat 4519.225 kb on + strand, within MPMX20_04324at 4519.230 kb on + strand, within MPMX20_04324at 4519.230 kb on + strand, within MPMX20_04324at 4519.233 kb on - strand, within MPMX20_04324at 4519.256 kb on - strand, within MPMX20_04324at 4519.339 kb on + strand, within MPMX20_04324at 4519.378 kb on + strand, within MPMX20_04324at 4519.397 kb on + strand, within MPMX20_04324at 4519.397 kb on + strand, within MPMX20_04324at 4519.403 kb on + strand, within MPMX20_04324at 4519.440 kb on + strand, within MPMX20_04324at 4519.503 kb on - strand, within MPMX20_04324at 4519.530 kb on - strandat 4519.591 kb on + strandat 4519.633 kb on + strand, within MPMX20_04325at 4519.641 kb on - strand, within MPMX20_04325at 4519.641 kb on - strand, within MPMX20_04325at 4519.641 kb on - strand, within MPMX20_04325at 4519.692 kb on - strand, within MPMX20_04325at 4519.696 kb on + strand, within MPMX20_04325at 4519.742 kb on - strand, within MPMX20_04325at 4519.747 kb on - strand, within MPMX20_04325at 4519.747 kb on - strand, within MPMX20_04325at 4519.852 kb on - strand, within MPMX20_04325at 4519.885 kb on - strand, within MPMX20_04325at 4519.951 kb on - strand, within MPMX20_04325at 4520.002 kb on + strand, within MPMX20_04325at 4520.002 kb on + strand, within MPMX20_04325at 4520.002 kb on + strand, within MPMX20_04325at 4520.089 kb on - strand, within MPMX20_04325at 4520.094 kb on + strand, within MPMX20_04325at 4520.230 kb on - strandat 4520.286 kb on - strandat 4520.346 kb on + strandat 4520.346 kb on + strandat 4520.346 kb on + strandat 4520.354 kb on - strandat 4520.354 kb on - strandat 4520.354 kb on - strandat 4520.394 kb on + strand, within MPMX20_04326at 4520.421 kb on + strand, within MPMX20_04326at 4520.431 kb on + strand, within MPMX20_04326at 4520.442 kb on + strand, within MPMX20_04326at 4520.471 kb on - strand, within MPMX20_04326at 4520.478 kb on - strand, within MPMX20_04326at 4520.479 kb on - strand, within MPMX20_04326at 4520.565 kb on - strand, within MPMX20_04326at 4520.734 kb on + strand, within MPMX20_04326at 4520.742 kb on - strand, within MPMX20_04326at 4520.812 kb on + strand, within MPMX20_04326at 4520.868 kb on + strand, within MPMX20_04326at 4520.878 kb on + strand, within MPMX20_04326at 4520.924 kb on - strand, within MPMX20_04326at 4520.924 kb on - strand, within MPMX20_04326at 4520.924 kb on - strand, within MPMX20_04326at 4520.924 kb on - strand, within MPMX20_04326at 4520.938 kb on + strand, within MPMX20_04326at 4520.971 kb on + strand, within MPMX20_04326at 4521.119 kb on - strand, within MPMX20_04326at 4521.132 kb on - strand, within MPMX20_04326at 4521.170 kb on + strand, within MPMX20_04326at 4521.223 kb on - strand, within MPMX20_04326

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Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
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4,518,680 - MPMX20_04323 0.80 +0.0
4,518,780 - MPMX20_04323 0.86 +2.8
4,518,791 - MPMX20_04323 0.86 +2.4
4,518,816 + MPMX20_04323 0.88 +2.9
4,518,849 + MPMX20_04323 0.89 +4.2
4,518,878 + -0.3
4,518,878 + +1.6
4,518,878 + +0.2
4,518,883 + +0.5
4,518,886 - -4.0
4,518,886 - -2.2
4,518,974 - +1.4
4,518,999 + -0.3
4,518,999 + +1.8
4,519,007 - -1.4
4,519,007 - +1.5
4,519,067 + +0.2
4,519,068 - -0.7
4,519,075 - -2.9
4,519,078 + -0.9
4,519,078 + -1.5
4,519,078 + +2.6
4,519,131 - +1.6
4,519,131 - -1.7
4,519,225 + MPMX20_04324 0.18 -1.9
4,519,230 + MPMX20_04324 0.19 -2.5
4,519,230 + MPMX20_04324 0.19 -2.1
4,519,233 - MPMX20_04324 0.20 +1.0
4,519,256 - MPMX20_04324 0.26 -4.0
4,519,339 + MPMX20_04324 0.47 +1.9
4,519,378 + MPMX20_04324 0.57 -0.3
4,519,397 + MPMX20_04324 0.62 +1.3
4,519,397 + MPMX20_04324 0.62 -2.0
4,519,403 + MPMX20_04324 0.64 -2.4
4,519,440 + MPMX20_04324 0.73 +0.5
4,519,503 - MPMX20_04324 0.89 +1.5
4,519,530 - +1.1
4,519,591 + -1.7
4,519,633 + MPMX20_04325 0.15 +0.0
4,519,641 - MPMX20_04325 0.16 +4.2
4,519,641 - MPMX20_04325 0.16 -3.5
4,519,641 - MPMX20_04325 0.16 -0.7
4,519,692 - MPMX20_04325 0.22 -2.0
4,519,696 + MPMX20_04325 0.23 +2.1
4,519,742 - MPMX20_04325 0.29 -2.2
4,519,747 - MPMX20_04325 0.30 -2.9
4,519,747 - MPMX20_04325 0.30 +2.0
4,519,852 - MPMX20_04325 0.44 +1.5
4,519,885 - MPMX20_04325 0.48 +0.6
4,519,951 - MPMX20_04325 0.57 -2.3
4,520,002 + MPMX20_04325 0.64 +0.7
4,520,002 + MPMX20_04325 0.64 -3.3
4,520,002 + MPMX20_04325 0.64 +1.6
4,520,089 - MPMX20_04325 0.75 -0.1
4,520,094 + MPMX20_04325 0.76 -1.8
4,520,230 - -0.4
4,520,286 - -1.7
4,520,346 + +1.3
4,520,346 + +0.8
4,520,346 + -1.2
4,520,354 - +1.5
4,520,354 - +2.4
4,520,354 - -0.0
4,520,394 + MPMX20_04326 0.12 -2.1
4,520,421 + MPMX20_04326 0.14 +1.9
4,520,431 + MPMX20_04326 0.15 -3.1
4,520,442 + MPMX20_04326 0.16 -0.8
4,520,471 - MPMX20_04326 0.19 -0.5
4,520,478 - MPMX20_04326 0.19 +0.7
4,520,479 - MPMX20_04326 0.20 -1.3
4,520,565 - MPMX20_04326 0.28 -1.5
4,520,734 + MPMX20_04326 0.43 -0.4
4,520,742 - MPMX20_04326 0.44 -0.8
4,520,812 + MPMX20_04326 0.51 -0.7
4,520,868 + MPMX20_04326 0.56 -0.3
4,520,878 + MPMX20_04326 0.57 +0.9
4,520,924 - MPMX20_04326 0.61 +1.2
4,520,924 - MPMX20_04326 0.61 -2.2
4,520,924 - MPMX20_04326 0.61 -1.7
4,520,924 - MPMX20_04326 0.61 +0.8
4,520,938 + MPMX20_04326 0.62 +0.6
4,520,971 + MPMX20_04326 0.65 +1.7
4,521,119 - MPMX20_04326 0.79 +1.9
4,521,132 - MPMX20_04326 0.80 +0.4
4,521,170 + MPMX20_04326 0.84 -4.0
4,521,223 - MPMX20_04326 0.89 +1.5

Or see this region's nucleotide sequence