Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04154

Experiment: octanoate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04153 and MPMX20_04154 overlap by 11 nucleotidesMPMX20_04154 and MPMX20_04155 are separated by 9 nucleotidesMPMX20_04155 and MPMX20_04156 overlap by 1 nucleotides MPMX20_04153: MPMX20_04153 - Ribonuclease G, at 4,355,694 to 4,357,163 _04153 MPMX20_04154: MPMX20_04154 - dTTP/UTP pyrophosphatase, at 4,357,153 to 4,357,746 _04154 MPMX20_04155: MPMX20_04155 - Rod shape-determining protein MreD, at 4,357,756 to 4,358,244 _04155 MPMX20_04156: MPMX20_04156 - Cell shape-determining protein MreC, at 4,358,244 to 4,359,260 _04156 Position (kb) 4357 4358Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 4356.169 kb on - strand, within MPMX20_04153at 4356.169 kb on - strand, within MPMX20_04153at 4356.193 kb on - strand, within MPMX20_04153at 4356.212 kb on + strand, within MPMX20_04153at 4356.364 kb on + strand, within MPMX20_04153at 4356.390 kb on - strand, within MPMX20_04153at 4356.425 kb on - strand, within MPMX20_04153at 4356.448 kb on - strand, within MPMX20_04153at 4356.523 kb on - strand, within MPMX20_04153at 4356.540 kb on - strand, within MPMX20_04153at 4356.572 kb on + strand, within MPMX20_04153at 4356.592 kb on + strand, within MPMX20_04153at 4356.592 kb on + strand, within MPMX20_04153at 4356.600 kb on - strand, within MPMX20_04153at 4356.600 kb on - strand, within MPMX20_04153at 4356.732 kb on - strand, within MPMX20_04153at 4356.970 kb on + strand, within MPMX20_04153at 4356.978 kb on - strand, within MPMX20_04153at 4356.978 kb on - strand, within MPMX20_04153at 4356.978 kb on - strand, within MPMX20_04153at 4356.980 kb on + strand, within MPMX20_04153at 4357.011 kb on + strand, within MPMX20_04153at 4357.103 kb on + strandat 4357.133 kb on + strandat 4357.146 kb on - strandat 4357.222 kb on - strand, within MPMX20_04154at 4357.260 kb on - strand, within MPMX20_04154at 4357.315 kb on - strand, within MPMX20_04154at 4357.386 kb on + strand, within MPMX20_04154at 4357.404 kb on - strand, within MPMX20_04154at 4357.493 kb on - strand, within MPMX20_04154at 4357.623 kb on - strand, within MPMX20_04154at 4357.665 kb on - strand, within MPMX20_04154at 4357.671 kb on + strand, within MPMX20_04154at 4357.671 kb on + strand, within MPMX20_04154

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Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
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4,356,169 - MPMX20_04153 0.32 -0.7
4,356,169 - MPMX20_04153 0.32 -1.1
4,356,193 - MPMX20_04153 0.34 -1.4
4,356,212 + MPMX20_04153 0.35 -1.8
4,356,364 + MPMX20_04153 0.46 -2.8
4,356,390 - MPMX20_04153 0.47 +2.0
4,356,425 - MPMX20_04153 0.50 +0.2
4,356,448 - MPMX20_04153 0.51 -2.6
4,356,523 - MPMX20_04153 0.56 +0.7
4,356,540 - MPMX20_04153 0.58 +3.0
4,356,572 + MPMX20_04153 0.60 -1.2
4,356,592 + MPMX20_04153 0.61 +1.4
4,356,592 + MPMX20_04153 0.61 -0.5
4,356,600 - MPMX20_04153 0.62 -2.5
4,356,600 - MPMX20_04153 0.62 -1.3
4,356,732 - MPMX20_04153 0.71 +2.7
4,356,970 + MPMX20_04153 0.87 +1.6
4,356,978 - MPMX20_04153 0.87 -1.9
4,356,978 - MPMX20_04153 0.87 +1.8
4,356,978 - MPMX20_04153 0.87 -0.1
4,356,980 + MPMX20_04153 0.87 -1.3
4,357,011 + MPMX20_04153 0.90 +2.9
4,357,103 + -0.3
4,357,133 + +2.1
4,357,146 - +2.8
4,357,222 - MPMX20_04154 0.12 -2.3
4,357,260 - MPMX20_04154 0.18 -3.1
4,357,315 - MPMX20_04154 0.27 -1.6
4,357,386 + MPMX20_04154 0.39 -2.6
4,357,404 - MPMX20_04154 0.42 -2.7
4,357,493 - MPMX20_04154 0.57 -1.3
4,357,623 - MPMX20_04154 0.79 +0.7
4,357,665 - MPMX20_04154 0.86 -3.1
4,357,671 + MPMX20_04154 0.87 +1.6
4,357,671 + MPMX20_04154 0.87 -2.9

Or see this region's nucleotide sequence