Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04094

Experiment: octanoate (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX20_04093 and MPMX20_04094 are separated by 231 nucleotidesMPMX20_04094 and MPMX20_04095 are separated by 61 nucleotides MPMX20_04093: MPMX20_04093 - Octaprenyl diphosphate synthase, at 4,289,837 to 4,290,808 _04093 MPMX20_04094: MPMX20_04094 - hypothetical protein, at 4,291,040 to 4,291,327 _04094 MPMX20_04095: MPMX20_04095 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase, at 4,291,389 to 4,292,648 _04095 Position (kb) 4291 4292Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 4290.803 kb on + strandat 4290.811 kb on - strandat 4290.855 kb on + strandat 4290.855 kb on + strandat 4290.865 kb on - strandat 4290.888 kb on + strandat 4290.890 kb on - strandat 4290.896 kb on - strandat 4290.911 kb on + strandat 4290.988 kb on - strandat 4291.025 kb on + strandat 4291.025 kb on + strandat 4291.033 kb on - strandat 4291.033 kb on - strandat 4291.035 kb on + strandat 4291.035 kb on + strandat 4291.035 kb on + strandat 4291.035 kb on + strandat 4291.043 kb on - strandat 4291.043 kb on - strandat 4291.070 kb on + strand, within MPMX20_04094at 4291.078 kb on - strand, within MPMX20_04094at 4291.078 kb on - strand, within MPMX20_04094at 4291.128 kb on + strand, within MPMX20_04094at 4291.136 kb on - strand, within MPMX20_04094at 4291.151 kb on - strand, within MPMX20_04094at 4291.160 kb on + strand, within MPMX20_04094at 4291.165 kb on + strand, within MPMX20_04094at 4291.170 kb on + strand, within MPMX20_04094at 4291.218 kb on - strand, within MPMX20_04094at 4291.220 kb on - strand, within MPMX20_04094at 4291.228 kb on + strand, within MPMX20_04094at 4291.228 kb on + strand, within MPMX20_04094at 4291.236 kb on - strand, within MPMX20_04094at 4291.354 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
remove
4,290,803 + -2.4
4,290,811 - +1.4
4,290,855 + -1.4
4,290,855 + -1.9
4,290,865 - -0.7
4,290,888 + -2.3
4,290,890 - -2.2
4,290,896 - +0.7
4,290,911 + -1.8
4,290,988 - -3.6
4,291,025 + +2.0
4,291,025 + -0.1
4,291,033 - +2.5
4,291,033 - -2.4
4,291,035 + -0.7
4,291,035 + -1.7
4,291,035 + +0.9
4,291,035 + +2.7
4,291,043 - +1.0
4,291,043 - +0.9
4,291,070 + MPMX20_04094 0.10 -0.3
4,291,078 - MPMX20_04094 0.13 -2.5
4,291,078 - MPMX20_04094 0.13 +1.0
4,291,128 + MPMX20_04094 0.31 -3.1
4,291,136 - MPMX20_04094 0.33 -0.8
4,291,151 - MPMX20_04094 0.39 -2.9
4,291,160 + MPMX20_04094 0.42 -3.1
4,291,165 + MPMX20_04094 0.43 -2.5
4,291,170 + MPMX20_04094 0.45 -3.2
4,291,218 - MPMX20_04094 0.62 -2.7
4,291,220 - MPMX20_04094 0.62 -3.0
4,291,228 + MPMX20_04094 0.65 +0.8
4,291,228 + MPMX20_04094 0.65 -2.3
4,291,236 - MPMX20_04094 0.68 -1.5
4,291,354 - +2.4

Or see this region's nucleotide sequence