Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03983

Experiment: octanoate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03982 and MPMX20_03983 are separated by 33 nucleotidesMPMX20_03983 and MPMX20_03984 are separated by 42 nucleotidesMPMX20_03984 and MPMX20_03985 are separated by 12 nucleotides MPMX20_03982: MPMX20_03982 - Putrescine aminotransferase, at 4,177,602 to 4,178,981 _03982 MPMX20_03983: MPMX20_03983 - hypothetical protein, at 4,179,015 to 4,179,617 _03983 MPMX20_03984: MPMX20_03984 - hypothetical protein, at 4,179,660 to 4,180,346 _03984 MPMX20_03985: MPMX20_03985 - 4-hydroxy-tetrahydrodipicolinate synthase, at 4,180,359 to 4,181,207 _03985 Position (kb) 4179 4180Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 4178.024 kb on + strand, within MPMX20_03982at 4178.030 kb on - strand, within MPMX20_03982at 4178.055 kb on + strand, within MPMX20_03982at 4178.068 kb on - strand, within MPMX20_03982at 4178.243 kb on + strand, within MPMX20_03982at 4178.243 kb on + strand, within MPMX20_03982at 4178.243 kb on + strand, within MPMX20_03982at 4178.251 kb on - strand, within MPMX20_03982at 4178.251 kb on - strand, within MPMX20_03982at 4178.253 kb on + strand, within MPMX20_03982at 4178.264 kb on + strand, within MPMX20_03982at 4178.265 kb on - strand, within MPMX20_03982at 4178.276 kb on + strand, within MPMX20_03982at 4178.317 kb on - strand, within MPMX20_03982at 4178.332 kb on - strand, within MPMX20_03982at 4178.343 kb on - strand, within MPMX20_03982at 4178.343 kb on - strand, within MPMX20_03982at 4178.349 kb on + strand, within MPMX20_03982at 4178.398 kb on - strand, within MPMX20_03982at 4178.400 kb on + strand, within MPMX20_03982at 4178.403 kb on - strand, within MPMX20_03982at 4178.408 kb on - strand, within MPMX20_03982at 4178.450 kb on - strand, within MPMX20_03982at 4178.565 kb on - strand, within MPMX20_03982at 4178.590 kb on + strand, within MPMX20_03982at 4178.590 kb on + strand, within MPMX20_03982at 4178.598 kb on - strand, within MPMX20_03982at 4178.618 kb on - strand, within MPMX20_03982at 4178.618 kb on - strand, within MPMX20_03982at 4178.655 kb on + strand, within MPMX20_03982at 4178.663 kb on + strand, within MPMX20_03982at 4178.664 kb on - strand, within MPMX20_03982at 4178.683 kb on - strand, within MPMX20_03982at 4178.690 kb on - strand, within MPMX20_03982at 4178.715 kb on - strand, within MPMX20_03982at 4178.756 kb on + strand, within MPMX20_03982at 4178.756 kb on + strand, within MPMX20_03982at 4178.756 kb on + strand, within MPMX20_03982at 4178.758 kb on + strand, within MPMX20_03982at 4178.758 kb on + strand, within MPMX20_03982at 4178.764 kb on - strand, within MPMX20_03982at 4178.764 kb on - strand, within MPMX20_03982at 4178.764 kb on - strand, within MPMX20_03982at 4178.784 kb on - strand, within MPMX20_03982at 4178.802 kb on + strand, within MPMX20_03982at 4178.853 kb on + strandat 4178.963 kb on - strandat 4178.965 kb on + strandat 4178.996 kb on + strandat 4179.078 kb on + strand, within MPMX20_03983at 4179.086 kb on - strand, within MPMX20_03983at 4179.160 kb on - strand, within MPMX20_03983at 4179.163 kb on + strand, within MPMX20_03983at 4179.190 kb on - strand, within MPMX20_03983at 4179.233 kb on + strand, within MPMX20_03983at 4179.346 kb on + strand, within MPMX20_03983at 4179.371 kb on + strand, within MPMX20_03983at 4179.465 kb on + strand, within MPMX20_03983at 4179.640 kb on - strandat 4179.640 kb on - strandat 4179.687 kb on - strandat 4179.734 kb on + strand, within MPMX20_03984at 4179.852 kb on + strand, within MPMX20_03984at 4179.855 kb on - strand, within MPMX20_03984at 4179.879 kb on - strand, within MPMX20_03984at 4179.885 kb on + strand, within MPMX20_03984at 4179.895 kb on + strand, within MPMX20_03984at 4179.906 kb on + strand, within MPMX20_03984at 4179.911 kb on + strand, within MPMX20_03984at 4179.919 kb on - strand, within MPMX20_03984at 4179.941 kb on + strand, within MPMX20_03984at 4179.941 kb on + strand, within MPMX20_03984at 4179.941 kb on + strand, within MPMX20_03984at 4179.941 kb on + strand, within MPMX20_03984at 4179.941 kb on + strand, within MPMX20_03984at 4179.941 kb on + strand, within MPMX20_03984at 4180.042 kb on + strand, within MPMX20_03984at 4180.068 kb on - strand, within MPMX20_03984at 4180.076 kb on - strand, within MPMX20_03984at 4180.078 kb on + strand, within MPMX20_03984at 4180.078 kb on + strand, within MPMX20_03984at 4180.146 kb on + strand, within MPMX20_03984at 4180.172 kb on + strand, within MPMX20_03984at 4180.209 kb on + strand, within MPMX20_03984at 4180.257 kb on + strand, within MPMX20_03984at 4180.281 kb on - strandat 4180.408 kb on + strandat 4180.505 kb on + strand, within MPMX20_03985at 4180.518 kb on - strand, within MPMX20_03985at 4180.518 kb on - strand, within MPMX20_03985at 4180.579 kb on + strand, within MPMX20_03985

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Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
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4,178,024 + MPMX20_03982 0.31 -0.1
4,178,030 - MPMX20_03982 0.31 +1.7
4,178,055 + MPMX20_03982 0.33 +1.2
4,178,068 - MPMX20_03982 0.34 -0.4
4,178,243 + MPMX20_03982 0.46 +3.9
4,178,243 + MPMX20_03982 0.46 -0.1
4,178,243 + MPMX20_03982 0.46 -1.8
4,178,251 - MPMX20_03982 0.47 -1.2
4,178,251 - MPMX20_03982 0.47 -3.4
4,178,253 + MPMX20_03982 0.47 +0.9
4,178,264 + MPMX20_03982 0.48 -0.1
4,178,265 - MPMX20_03982 0.48 -2.0
4,178,276 + MPMX20_03982 0.49 +1.2
4,178,317 - MPMX20_03982 0.52 -1.0
4,178,332 - MPMX20_03982 0.53 -2.6
4,178,343 - MPMX20_03982 0.54 -3.6
4,178,343 - MPMX20_03982 0.54 +3.3
4,178,349 + MPMX20_03982 0.54 -0.7
4,178,398 - MPMX20_03982 0.58 -0.5
4,178,400 + MPMX20_03982 0.58 -0.2
4,178,403 - MPMX20_03982 0.58 -3.0
4,178,408 - MPMX20_03982 0.58 -2.0
4,178,450 - MPMX20_03982 0.61 +2.6
4,178,565 - MPMX20_03982 0.70 +0.9
4,178,590 + MPMX20_03982 0.72 +2.1
4,178,590 + MPMX20_03982 0.72 -0.1
4,178,598 - MPMX20_03982 0.72 -0.1
4,178,618 - MPMX20_03982 0.74 +0.7
4,178,618 - MPMX20_03982 0.74 -1.4
4,178,655 + MPMX20_03982 0.76 -0.1
4,178,663 + MPMX20_03982 0.77 +3.5
4,178,664 - MPMX20_03982 0.77 -1.2
4,178,683 - MPMX20_03982 0.78 +2.6
4,178,690 - MPMX20_03982 0.79 +2.9
4,178,715 - MPMX20_03982 0.81 +3.3
4,178,756 + MPMX20_03982 0.84 -0.7
4,178,756 + MPMX20_03982 0.84 +2.3
4,178,756 + MPMX20_03982 0.84 -0.8
4,178,758 + MPMX20_03982 0.84 -1.2
4,178,758 + MPMX20_03982 0.84 -1.3
4,178,764 - MPMX20_03982 0.84 -0.8
4,178,764 - MPMX20_03982 0.84 -2.7
4,178,764 - MPMX20_03982 0.84 +0.5
4,178,784 - MPMX20_03982 0.86 -1.0
4,178,802 + MPMX20_03982 0.87 -1.8
4,178,853 + -1.3
4,178,963 - +2.1
4,178,965 + -1.8
4,178,996 + -2.3
4,179,078 + MPMX20_03983 0.10 +2.5
4,179,086 - MPMX20_03983 0.12 +1.7
4,179,160 - MPMX20_03983 0.24 -0.1
4,179,163 + MPMX20_03983 0.25 +0.2
4,179,190 - MPMX20_03983 0.29 -3.8
4,179,233 + MPMX20_03983 0.36 +1.5
4,179,346 + MPMX20_03983 0.55 +1.9
4,179,371 + MPMX20_03983 0.59 -0.4
4,179,465 + MPMX20_03983 0.75 +1.0
4,179,640 - +0.7
4,179,640 - -1.8
4,179,687 - +1.0
4,179,734 + MPMX20_03984 0.11 -1.5
4,179,852 + MPMX20_03984 0.28 +1.2
4,179,855 - MPMX20_03984 0.28 +1.6
4,179,879 - MPMX20_03984 0.32 +1.0
4,179,885 + MPMX20_03984 0.33 +1.1
4,179,895 + MPMX20_03984 0.34 -0.8
4,179,906 + MPMX20_03984 0.36 -1.5
4,179,911 + MPMX20_03984 0.37 -2.9
4,179,919 - MPMX20_03984 0.38 -0.9
4,179,941 + MPMX20_03984 0.41 +1.3
4,179,941 + MPMX20_03984 0.41 -2.0
4,179,941 + MPMX20_03984 0.41 -0.3
4,179,941 + MPMX20_03984 0.41 +1.3
4,179,941 + MPMX20_03984 0.41 -0.2
4,179,941 + MPMX20_03984 0.41 -3.4
4,180,042 + MPMX20_03984 0.56 -0.5
4,180,068 - MPMX20_03984 0.59 -3.8
4,180,076 - MPMX20_03984 0.61 -4.0
4,180,078 + MPMX20_03984 0.61 -0.5
4,180,078 + MPMX20_03984 0.61 +4.3
4,180,146 + MPMX20_03984 0.71 +1.1
4,180,172 + MPMX20_03984 0.75 -2.0
4,180,209 + MPMX20_03984 0.80 -2.1
4,180,257 + MPMX20_03984 0.87 -1.8
4,180,281 - +1.4
4,180,408 + +1.4
4,180,505 + MPMX20_03985 0.17 -2.0
4,180,518 - MPMX20_03985 0.19 -3.4
4,180,518 - MPMX20_03985 0.19 -0.1
4,180,579 + MPMX20_03985 0.26 +2.6

Or see this region's nucleotide sequence