Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03875

Experiment: octanoate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03873 and MPMX20_03874 overlap by 4 nucleotidesMPMX20_03874 and MPMX20_03875 overlap by 4 nucleotidesMPMX20_03875 and MPMX20_03876 are separated by 384 nucleotides MPMX20_03873: MPMX20_03873 - Iron-uptake system permease protein FeuC, at 4,080,772 to 4,081,812 _03873 MPMX20_03874: MPMX20_03874 - putative siderophore transport system permease protein YfiZ, at 4,081,809 to 4,082,792 _03874 MPMX20_03875: MPMX20_03875 - putative siderophore transport system ATP-binding protein YusV, at 4,082,789 to 4,083,601 _03875 MPMX20_03876: MPMX20_03876 - Metal-pseudopaline receptor CntO, at 4,083,986 to 4,086,127 _03876 Position (kb) 4082 4083 4084Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 4081.805 kb on - strandat 4081.828 kb on - strandat 4081.850 kb on - strandat 4081.857 kb on - strandat 4081.891 kb on + strandat 4081.891 kb on + strandat 4081.891 kb on - strandat 4081.899 kb on - strandat 4081.899 kb on - strandat 4081.899 kb on - strandat 4081.899 kb on - strandat 4081.939 kb on + strand, within MPMX20_03874at 4081.940 kb on - strand, within MPMX20_03874at 4081.947 kb on - strand, within MPMX20_03874at 4081.947 kb on - strand, within MPMX20_03874at 4081.984 kb on - strand, within MPMX20_03874at 4082.012 kb on + strand, within MPMX20_03874at 4082.067 kb on - strand, within MPMX20_03874at 4082.067 kb on - strand, within MPMX20_03874at 4082.101 kb on - strand, within MPMX20_03874at 4082.114 kb on + strand, within MPMX20_03874at 4082.129 kb on - strand, within MPMX20_03874at 4082.129 kb on - strand, within MPMX20_03874at 4082.129 kb on - strand, within MPMX20_03874at 4082.175 kb on + strand, within MPMX20_03874at 4082.271 kb on + strand, within MPMX20_03874at 4082.271 kb on + strand, within MPMX20_03874at 4082.288 kb on + strand, within MPMX20_03874at 4082.295 kb on + strand, within MPMX20_03874at 4082.295 kb on + strand, within MPMX20_03874at 4082.295 kb on + strand, within MPMX20_03874at 4082.296 kb on - strand, within MPMX20_03874at 4082.303 kb on - strand, within MPMX20_03874at 4082.407 kb on + strand, within MPMX20_03874at 4082.557 kb on - strand, within MPMX20_03874at 4082.585 kb on + strand, within MPMX20_03874at 4082.585 kb on + strand, within MPMX20_03874at 4082.585 kb on + strand, within MPMX20_03874at 4082.593 kb on - strand, within MPMX20_03874at 4082.719 kb on + strandat 4082.737 kb on - strandat 4082.845 kb on + strandat 4082.853 kb on - strandat 4082.868 kb on + strandat 4082.903 kb on + strand, within MPMX20_03875at 4082.903 kb on + strand, within MPMX20_03875at 4082.911 kb on - strand, within MPMX20_03875at 4082.918 kb on - strand, within MPMX20_03875at 4082.932 kb on - strand, within MPMX20_03875at 4082.932 kb on - strand, within MPMX20_03875at 4082.939 kb on - strand, within MPMX20_03875at 4083.033 kb on + strand, within MPMX20_03875at 4083.043 kb on + strand, within MPMX20_03875at 4083.051 kb on - strand, within MPMX20_03875at 4083.109 kb on - strand, within MPMX20_03875at 4083.133 kb on + strand, within MPMX20_03875at 4083.236 kb on - strand, within MPMX20_03875at 4083.293 kb on - strand, within MPMX20_03875at 4083.304 kb on + strand, within MPMX20_03875at 4083.305 kb on + strand, within MPMX20_03875at 4083.312 kb on - strand, within MPMX20_03875at 4083.349 kb on + strand, within MPMX20_03875at 4083.357 kb on - strand, within MPMX20_03875at 4083.357 kb on - strand, within MPMX20_03875at 4083.357 kb on - strand, within MPMX20_03875at 4083.393 kb on + strand, within MPMX20_03875at 4083.411 kb on + strand, within MPMX20_03875at 4083.438 kb on + strand, within MPMX20_03875at 4083.443 kb on + strand, within MPMX20_03875at 4083.479 kb on + strand, within MPMX20_03875at 4083.481 kb on + strand, within MPMX20_03875at 4083.574 kb on + strandat 4083.577 kb on - strandat 4083.590 kb on + strandat 4083.598 kb on - strandat 4083.598 kb on - strandat 4083.673 kb on + strandat 4083.708 kb on + strandat 4083.794 kb on + strandat 4083.802 kb on - strandat 4083.802 kb on - strandat 4083.802 kb on - strandat 4083.914 kb on + strandat 4083.949 kb on + strandat 4083.957 kb on - strandat 4083.992 kb on + strandat 4084.001 kb on + strandat 4084.001 kb on + strandat 4084.001 kb on - strandat 4084.009 kb on - strandat 4084.035 kb on + strandat 4084.068 kb on - strandat 4084.078 kb on - strandat 4084.085 kb on + strandat 4084.093 kb on - strandat 4084.120 kb on + strandat 4084.160 kb on + strandat 4084.204 kb on - strand, within MPMX20_03876at 4084.214 kb on - strand, within MPMX20_03876at 4084.267 kb on + strand, within MPMX20_03876at 4084.275 kb on - strand, within MPMX20_03876at 4084.275 kb on - strand, within MPMX20_03876at 4084.306 kb on - strand, within MPMX20_03876at 4084.306 kb on - strand, within MPMX20_03876at 4084.349 kb on - strand, within MPMX20_03876at 4084.373 kb on + strand, within MPMX20_03876at 4084.381 kb on - strand, within MPMX20_03876at 4084.397 kb on + strand, within MPMX20_03876at 4084.418 kb on - strand, within MPMX20_03876at 4084.418 kb on - strand, within MPMX20_03876at 4084.418 kb on - strand, within MPMX20_03876at 4084.418 kb on - strand, within MPMX20_03876at 4084.418 kb on - strand, within MPMX20_03876at 4084.421 kb on + strand, within MPMX20_03876at 4084.463 kb on - strand, within MPMX20_03876at 4084.487 kb on + strand, within MPMX20_03876at 4084.557 kb on - strand, within MPMX20_03876at 4084.574 kb on + strand, within MPMX20_03876at 4084.577 kb on - strand, within MPMX20_03876at 4084.577 kb on - strand, within MPMX20_03876

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Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
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4,081,805 - +2.2
4,081,828 - +3.5
4,081,850 - -3.2
4,081,857 - -1.8
4,081,891 + -3.6
4,081,891 + +1.5
4,081,891 - -1.4
4,081,899 - +1.7
4,081,899 - -1.9
4,081,899 - +1.3
4,081,899 - +1.0
4,081,939 + MPMX20_03874 0.13 +1.3
4,081,940 - MPMX20_03874 0.13 -0.3
4,081,947 - MPMX20_03874 0.14 +4.1
4,081,947 - MPMX20_03874 0.14 -0.0
4,081,984 - MPMX20_03874 0.18 -2.8
4,082,012 + MPMX20_03874 0.21 -1.8
4,082,067 - MPMX20_03874 0.26 -3.2
4,082,067 - MPMX20_03874 0.26 -2.2
4,082,101 - MPMX20_03874 0.30 -0.8
4,082,114 + MPMX20_03874 0.31 -0.6
4,082,129 - MPMX20_03874 0.33 -1.2
4,082,129 - MPMX20_03874 0.33 -1.9
4,082,129 - MPMX20_03874 0.33 -1.6
4,082,175 + MPMX20_03874 0.37 -0.0
4,082,271 + MPMX20_03874 0.47 +0.9
4,082,271 + MPMX20_03874 0.47 -2.7
4,082,288 + MPMX20_03874 0.49 -1.7
4,082,295 + MPMX20_03874 0.49 +2.2
4,082,295 + MPMX20_03874 0.49 -0.5
4,082,295 + MPMX20_03874 0.49 +0.4
4,082,296 - MPMX20_03874 0.49 +0.3
4,082,303 - MPMX20_03874 0.50 -1.3
4,082,407 + MPMX20_03874 0.61 -2.3
4,082,557 - MPMX20_03874 0.76 +0.4
4,082,585 + MPMX20_03874 0.79 -2.3
4,082,585 + MPMX20_03874 0.79 -2.4
4,082,585 + MPMX20_03874 0.79 -2.0
4,082,593 - MPMX20_03874 0.80 +1.1
4,082,719 + +1.8
4,082,737 - +4.5
4,082,845 + -3.8
4,082,853 - -2.5
4,082,868 + -0.8
4,082,903 + MPMX20_03875 0.14 +0.7
4,082,903 + MPMX20_03875 0.14 -2.1
4,082,911 - MPMX20_03875 0.15 -0.6
4,082,918 - MPMX20_03875 0.16 +1.0
4,082,932 - MPMX20_03875 0.18 +0.3
4,082,932 - MPMX20_03875 0.18 -0.8
4,082,939 - MPMX20_03875 0.18 -1.6
4,083,033 + MPMX20_03875 0.30 +2.9
4,083,043 + MPMX20_03875 0.31 -1.4
4,083,051 - MPMX20_03875 0.32 +1.8
4,083,109 - MPMX20_03875 0.39 +0.5
4,083,133 + MPMX20_03875 0.42 -0.5
4,083,236 - MPMX20_03875 0.55 +3.1
4,083,293 - MPMX20_03875 0.62 +2.0
4,083,304 + MPMX20_03875 0.63 -3.5
4,083,305 + MPMX20_03875 0.63 +1.8
4,083,312 - MPMX20_03875 0.64 +3.5
4,083,349 + MPMX20_03875 0.69 -3.7
4,083,357 - MPMX20_03875 0.70 +0.5
4,083,357 - MPMX20_03875 0.70 -0.8
4,083,357 - MPMX20_03875 0.70 +0.2
4,083,393 + MPMX20_03875 0.74 -1.9
4,083,411 + MPMX20_03875 0.77 +1.8
4,083,438 + MPMX20_03875 0.80 +4.2
4,083,443 + MPMX20_03875 0.80 +1.7
4,083,479 + MPMX20_03875 0.85 +1.4
4,083,481 + MPMX20_03875 0.85 +0.7
4,083,574 + -0.2
4,083,577 - -0.3
4,083,590 + -3.0
4,083,598 - +0.7
4,083,598 - +2.2
4,083,673 + +0.7
4,083,708 + -1.4
4,083,794 + +1.9
4,083,802 - +2.7
4,083,802 - +2.9
4,083,802 - -3.7
4,083,914 + -1.8
4,083,949 + -1.8
4,083,957 - -0.7
4,083,992 + -0.8
4,084,001 + -2.7
4,084,001 + -2.9
4,084,001 - +2.1
4,084,009 - -2.2
4,084,035 + -0.6
4,084,068 - -1.1
4,084,078 - +3.2
4,084,085 + -2.0
4,084,093 - +1.9
4,084,120 + -0.5
4,084,160 + +1.0
4,084,204 - MPMX20_03876 0.10 +2.0
4,084,214 - MPMX20_03876 0.11 -0.4
4,084,267 + MPMX20_03876 0.13 -2.4
4,084,275 - MPMX20_03876 0.13 -1.5
4,084,275 - MPMX20_03876 0.13 +1.8
4,084,306 - MPMX20_03876 0.15 -0.1
4,084,306 - MPMX20_03876 0.15 +0.2
4,084,349 - MPMX20_03876 0.17 +0.7
4,084,373 + MPMX20_03876 0.18 +2.2
4,084,381 - MPMX20_03876 0.18 -2.4
4,084,397 + MPMX20_03876 0.19 -1.7
4,084,418 - MPMX20_03876 0.20 -2.5
4,084,418 - MPMX20_03876 0.20 +1.0
4,084,418 - MPMX20_03876 0.20 -1.0
4,084,418 - MPMX20_03876 0.20 -3.5
4,084,418 - MPMX20_03876 0.20 -0.1
4,084,421 + MPMX20_03876 0.20 -2.9
4,084,463 - MPMX20_03876 0.22 -0.4
4,084,487 + MPMX20_03876 0.23 -0.5
4,084,557 - MPMX20_03876 0.27 +1.2
4,084,574 + MPMX20_03876 0.27 +1.4
4,084,577 - MPMX20_03876 0.28 -0.7
4,084,577 - MPMX20_03876 0.28 +1.7

Or see this region's nucleotide sequence