Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03431

Experiment: octanoate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03430 and MPMX20_03431 are separated by 11 nucleotidesMPMX20_03431 and MPMX20_03432 are separated by 118 nucleotides MPMX20_03430: MPMX20_03430 - PTS system EIIBC component, at 3,618,791 to 3,620,152 _03430 MPMX20_03431: MPMX20_03431 - N-acetylmuramic acid 6-phosphate etherase, at 3,620,164 to 3,621,057 _03431 MPMX20_03432: MPMX20_03432 - HTH-type transcriptional regulator MurR, at 3,621,176 to 3,622,024 _03432 Position (kb) 3620 3621 3622Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 3619.263 kb on - strand, within MPMX20_03430at 3619.320 kb on - strand, within MPMX20_03430at 3619.339 kb on - strand, within MPMX20_03430at 3619.415 kb on - strand, within MPMX20_03430at 3619.428 kb on - strand, within MPMX20_03430at 3619.441 kb on - strand, within MPMX20_03430at 3619.443 kb on - strand, within MPMX20_03430at 3619.515 kb on + strand, within MPMX20_03430at 3619.515 kb on + strand, within MPMX20_03430at 3619.523 kb on - strand, within MPMX20_03430at 3619.535 kb on - strand, within MPMX20_03430at 3619.544 kb on - strand, within MPMX20_03430at 3619.552 kb on + strand, within MPMX20_03430at 3619.620 kb on + strand, within MPMX20_03430at 3619.620 kb on + strand, within MPMX20_03430at 3619.620 kb on + strand, within MPMX20_03430at 3619.628 kb on - strand, within MPMX20_03430at 3619.629 kb on - strand, within MPMX20_03430at 3619.765 kb on - strand, within MPMX20_03430at 3619.765 kb on - strand, within MPMX20_03430at 3619.765 kb on - strand, within MPMX20_03430at 3619.967 kb on + strand, within MPMX20_03430at 3620.043 kb on - strandat 3620.358 kb on + strand, within MPMX20_03431at 3620.496 kb on - strand, within MPMX20_03431at 3620.528 kb on + strand, within MPMX20_03431at 3620.601 kb on + strand, within MPMX20_03431at 3620.609 kb on - strand, within MPMX20_03431at 3620.632 kb on + strand, within MPMX20_03431at 3620.681 kb on - strand, within MPMX20_03431at 3620.681 kb on - strand, within MPMX20_03431at 3620.723 kb on - strand, within MPMX20_03431at 3620.732 kb on + strand, within MPMX20_03431at 3620.732 kb on + strand, within MPMX20_03431at 3620.760 kb on + strand, within MPMX20_03431at 3620.854 kb on + strand, within MPMX20_03431at 3620.972 kb on + strandat 3620.985 kb on + strandat 3621.059 kb on - strandat 3621.173 kb on + strandat 3621.173 kb on + strandat 3621.173 kb on + strandat 3621.173 kb on + strandat 3621.173 kb on + strandat 3621.173 kb on + strandat 3621.181 kb on - strandat 3621.309 kb on + strand, within MPMX20_03432at 3621.400 kb on + strand, within MPMX20_03432at 3621.400 kb on - strand, within MPMX20_03432at 3621.513 kb on + strand, within MPMX20_03432at 3621.513 kb on + strand, within MPMX20_03432at 3621.521 kb on - strand, within MPMX20_03432at 3621.591 kb on + strand, within MPMX20_03432at 3621.591 kb on + strand, within MPMX20_03432at 3621.591 kb on + strand, within MPMX20_03432at 3621.591 kb on + strand, within MPMX20_03432at 3621.591 kb on + strand, within MPMX20_03432at 3621.591 kb on + strand, within MPMX20_03432at 3621.591 kb on + strand, within MPMX20_03432at 3621.591 kb on + strand, within MPMX20_03432at 3621.591 kb on + strand, within MPMX20_03432at 3621.599 kb on - strand, within MPMX20_03432at 3621.599 kb on - strand, within MPMX20_03432at 3621.599 kb on - strand, within MPMX20_03432at 3621.599 kb on - strand, within MPMX20_03432at 3621.599 kb on - strand, within MPMX20_03432at 3621.599 kb on - strand, within MPMX20_03432at 3621.599 kb on - strand, within MPMX20_03432at 3621.599 kb on - strand, within MPMX20_03432at 3621.599 kb on - strand, within MPMX20_03432at 3621.683 kb on - strand, within MPMX20_03432at 3621.685 kb on + strand, within MPMX20_03432at 3621.685 kb on + strand, within MPMX20_03432at 3621.685 kb on + strand, within MPMX20_03432at 3621.733 kb on + strand, within MPMX20_03432at 3621.855 kb on + strand, within MPMX20_03432at 3621.864 kb on - strand, within MPMX20_03432at 3621.948 kb on + strandat 3621.948 kb on - strandat 3621.983 kb on - strandat 3621.996 kb on + strandat 3622.004 kb on - strandat 3622.004 kb on - strandat 3622.004 kb on - strandat 3622.018 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
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3,619,263 - MPMX20_03430 0.35 -0.1
3,619,320 - MPMX20_03430 0.39 -0.4
3,619,339 - MPMX20_03430 0.40 -4.0
3,619,415 - MPMX20_03430 0.46 -2.2
3,619,428 - MPMX20_03430 0.47 -1.7
3,619,441 - MPMX20_03430 0.48 +2.2
3,619,443 - MPMX20_03430 0.48 -2.3
3,619,515 + MPMX20_03430 0.53 -2.6
3,619,515 + MPMX20_03430 0.53 -3.5
3,619,523 - MPMX20_03430 0.54 -0.8
3,619,535 - MPMX20_03430 0.55 -1.0
3,619,544 - MPMX20_03430 0.55 -2.3
3,619,552 + MPMX20_03430 0.56 +1.8
3,619,620 + MPMX20_03430 0.61 +1.1
3,619,620 + MPMX20_03430 0.61 -0.8
3,619,620 + MPMX20_03430 0.61 -2.5
3,619,628 - MPMX20_03430 0.61 +0.3
3,619,629 - MPMX20_03430 0.62 -1.0
3,619,765 - MPMX20_03430 0.72 +2.0
3,619,765 - MPMX20_03430 0.72 -0.1
3,619,765 - MPMX20_03430 0.72 +3.0
3,619,967 + MPMX20_03430 0.86 -2.0
3,620,043 - +0.2
3,620,358 + MPMX20_03431 0.22 +2.2
3,620,496 - MPMX20_03431 0.37 -1.3
3,620,528 + MPMX20_03431 0.41 +1.8
3,620,601 + MPMX20_03431 0.49 +1.1
3,620,609 - MPMX20_03431 0.50 +1.0
3,620,632 + MPMX20_03431 0.52 +1.4
3,620,681 - MPMX20_03431 0.58 +3.2
3,620,681 - MPMX20_03431 0.58 -1.2
3,620,723 - MPMX20_03431 0.63 +1.2
3,620,732 + MPMX20_03431 0.64 -0.3
3,620,732 + MPMX20_03431 0.64 +1.1
3,620,760 + MPMX20_03431 0.67 -1.3
3,620,854 + MPMX20_03431 0.77 -0.6
3,620,972 + +1.2
3,620,985 + +0.6
3,621,059 - +1.7
3,621,173 + +0.3
3,621,173 + -2.7
3,621,173 + +0.9
3,621,173 + -1.2
3,621,173 + -2.4
3,621,173 + +0.6
3,621,181 - +0.2
3,621,309 + MPMX20_03432 0.16 +0.6
3,621,400 + MPMX20_03432 0.26 +3.9
3,621,400 - MPMX20_03432 0.26 -2.0
3,621,513 + MPMX20_03432 0.40 -2.8
3,621,513 + MPMX20_03432 0.40 +0.2
3,621,521 - MPMX20_03432 0.41 -1.2
3,621,591 + MPMX20_03432 0.49 +2.3
3,621,591 + MPMX20_03432 0.49 +1.2
3,621,591 + MPMX20_03432 0.49 +1.9
3,621,591 + MPMX20_03432 0.49 +1.2
3,621,591 + MPMX20_03432 0.49 +1.7
3,621,591 + MPMX20_03432 0.49 +0.9
3,621,591 + MPMX20_03432 0.49 -1.3
3,621,591 + MPMX20_03432 0.49 +1.0
3,621,591 + MPMX20_03432 0.49 +1.8
3,621,599 - MPMX20_03432 0.50 +1.5
3,621,599 - MPMX20_03432 0.50 +1.2
3,621,599 - MPMX20_03432 0.50 -0.7
3,621,599 - MPMX20_03432 0.50 -3.8
3,621,599 - MPMX20_03432 0.50 +1.5
3,621,599 - MPMX20_03432 0.50 -2.2
3,621,599 - MPMX20_03432 0.50 -3.3
3,621,599 - MPMX20_03432 0.50 -1.8
3,621,599 - MPMX20_03432 0.50 +4.5
3,621,683 - MPMX20_03432 0.60 +0.2
3,621,685 + MPMX20_03432 0.60 -0.8
3,621,685 + MPMX20_03432 0.60 -0.3
3,621,685 + MPMX20_03432 0.60 +0.8
3,621,733 + MPMX20_03432 0.66 -3.0
3,621,855 + MPMX20_03432 0.80 -2.1
3,621,864 - MPMX20_03432 0.81 -2.6
3,621,948 + +0.8
3,621,948 - -1.5
3,621,983 - -0.7
3,621,996 + +1.3
3,622,004 - -2.5
3,622,004 - -3.0
3,622,004 - -2.4
3,622,018 + +0.2

Or see this region's nucleotide sequence