Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03430 and MPMX20_03431 are separated by 11 nucleotides MPMX20_03431 and MPMX20_03432 are separated by 118 nucleotides
MPMX20_03430: MPMX20_03430 - PTS system EIIBC component, at 3,618,791 to 3,620,152
_03430
MPMX20_03431: MPMX20_03431 - N-acetylmuramic acid 6-phosphate etherase, at 3,620,164 to 3,621,057
_03431
MPMX20_03432: MPMX20_03432 - HTH-type transcriptional regulator MurR, at 3,621,176 to 3,622,024
_03432
Position (kb)
3620
3621
3622 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 3619.263 kb on - strand, within MPMX20_03430 at 3619.320 kb on - strand, within MPMX20_03430 at 3619.339 kb on - strand, within MPMX20_03430 at 3619.415 kb on - strand, within MPMX20_03430 at 3619.428 kb on - strand, within MPMX20_03430 at 3619.441 kb on - strand, within MPMX20_03430 at 3619.443 kb on - strand, within MPMX20_03430 at 3619.515 kb on + strand, within MPMX20_03430 at 3619.515 kb on + strand, within MPMX20_03430 at 3619.523 kb on - strand, within MPMX20_03430 at 3619.535 kb on - strand, within MPMX20_03430 at 3619.544 kb on - strand, within MPMX20_03430 at 3619.552 kb on + strand, within MPMX20_03430 at 3619.620 kb on + strand, within MPMX20_03430 at 3619.620 kb on + strand, within MPMX20_03430 at 3619.620 kb on + strand, within MPMX20_03430 at 3619.628 kb on - strand, within MPMX20_03430 at 3619.629 kb on - strand, within MPMX20_03430 at 3619.765 kb on - strand, within MPMX20_03430 at 3619.765 kb on - strand, within MPMX20_03430 at 3619.765 kb on - strand, within MPMX20_03430 at 3619.967 kb on + strand, within MPMX20_03430 at 3620.043 kb on - strand at 3620.358 kb on + strand, within MPMX20_03431 at 3620.496 kb on - strand, within MPMX20_03431 at 3620.528 kb on + strand, within MPMX20_03431 at 3620.601 kb on + strand, within MPMX20_03431 at 3620.609 kb on - strand, within MPMX20_03431 at 3620.632 kb on + strand, within MPMX20_03431 at 3620.681 kb on - strand, within MPMX20_03431 at 3620.681 kb on - strand, within MPMX20_03431 at 3620.723 kb on - strand, within MPMX20_03431 at 3620.732 kb on + strand, within MPMX20_03431 at 3620.732 kb on + strand, within MPMX20_03431 at 3620.760 kb on + strand, within MPMX20_03431 at 3620.854 kb on + strand, within MPMX20_03431 at 3620.972 kb on + strand at 3620.985 kb on + strand at 3621.059 kb on - strand at 3621.173 kb on + strand at 3621.173 kb on + strand at 3621.173 kb on + strand at 3621.173 kb on + strand at 3621.173 kb on + strand at 3621.173 kb on + strand at 3621.181 kb on - strand at 3621.309 kb on + strand, within MPMX20_03432 at 3621.400 kb on + strand, within MPMX20_03432 at 3621.400 kb on - strand, within MPMX20_03432 at 3621.513 kb on + strand, within MPMX20_03432 at 3621.513 kb on + strand, within MPMX20_03432 at 3621.521 kb on - strand, within MPMX20_03432 at 3621.591 kb on + strand, within MPMX20_03432 at 3621.591 kb on + strand, within MPMX20_03432 at 3621.591 kb on + strand, within MPMX20_03432 at 3621.591 kb on + strand, within MPMX20_03432 at 3621.591 kb on + strand, within MPMX20_03432 at 3621.591 kb on + strand, within MPMX20_03432 at 3621.591 kb on + strand, within MPMX20_03432 at 3621.591 kb on + strand, within MPMX20_03432 at 3621.591 kb on + strand, within MPMX20_03432 at 3621.599 kb on - strand, within MPMX20_03432 at 3621.599 kb on - strand, within MPMX20_03432 at 3621.599 kb on - strand, within MPMX20_03432 at 3621.599 kb on - strand, within MPMX20_03432 at 3621.599 kb on - strand, within MPMX20_03432 at 3621.599 kb on - strand, within MPMX20_03432 at 3621.599 kb on - strand, within MPMX20_03432 at 3621.599 kb on - strand, within MPMX20_03432 at 3621.599 kb on - strand, within MPMX20_03432 at 3621.683 kb on - strand, within MPMX20_03432 at 3621.685 kb on + strand, within MPMX20_03432 at 3621.685 kb on + strand, within MPMX20_03432 at 3621.685 kb on + strand, within MPMX20_03432 at 3621.733 kb on + strand, within MPMX20_03432 at 3621.855 kb on + strand, within MPMX20_03432 at 3621.864 kb on - strand, within MPMX20_03432 at 3621.948 kb on + strand at 3621.948 kb on - strand at 3621.983 kb on - strand at 3621.996 kb on + strand at 3622.004 kb on - strand at 3622.004 kb on - strand at 3622.004 kb on - strand at 3622.018 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 3,619,263 - MPMX20_03430 0.35 -0.1 3,619,320 - MPMX20_03430 0.39 -0.4 3,619,339 - MPMX20_03430 0.40 -4.0 3,619,415 - MPMX20_03430 0.46 -2.2 3,619,428 - MPMX20_03430 0.47 -1.7 3,619,441 - MPMX20_03430 0.48 +2.2 3,619,443 - MPMX20_03430 0.48 -2.3 3,619,515 + MPMX20_03430 0.53 -2.6 3,619,515 + MPMX20_03430 0.53 -3.5 3,619,523 - MPMX20_03430 0.54 -0.8 3,619,535 - MPMX20_03430 0.55 -1.0 3,619,544 - MPMX20_03430 0.55 -2.3 3,619,552 + MPMX20_03430 0.56 +1.8 3,619,620 + MPMX20_03430 0.61 +1.1 3,619,620 + MPMX20_03430 0.61 -0.8 3,619,620 + MPMX20_03430 0.61 -2.5 3,619,628 - MPMX20_03430 0.61 +0.3 3,619,629 - MPMX20_03430 0.62 -1.0 3,619,765 - MPMX20_03430 0.72 +2.0 3,619,765 - MPMX20_03430 0.72 -0.1 3,619,765 - MPMX20_03430 0.72 +3.0 3,619,967 + MPMX20_03430 0.86 -2.0 3,620,043 - +0.2 3,620,358 + MPMX20_03431 0.22 +2.2 3,620,496 - MPMX20_03431 0.37 -1.3 3,620,528 + MPMX20_03431 0.41 +1.8 3,620,601 + MPMX20_03431 0.49 +1.1 3,620,609 - MPMX20_03431 0.50 +1.0 3,620,632 + MPMX20_03431 0.52 +1.4 3,620,681 - MPMX20_03431 0.58 +3.2 3,620,681 - MPMX20_03431 0.58 -1.2 3,620,723 - MPMX20_03431 0.63 +1.2 3,620,732 + MPMX20_03431 0.64 -0.3 3,620,732 + MPMX20_03431 0.64 +1.1 3,620,760 + MPMX20_03431 0.67 -1.3 3,620,854 + MPMX20_03431 0.77 -0.6 3,620,972 + +1.2 3,620,985 + +0.6 3,621,059 - +1.7 3,621,173 + +0.3 3,621,173 + -2.7 3,621,173 + +0.9 3,621,173 + -1.2 3,621,173 + -2.4 3,621,173 + +0.6 3,621,181 - +0.2 3,621,309 + MPMX20_03432 0.16 +0.6 3,621,400 + MPMX20_03432 0.26 +3.9 3,621,400 - MPMX20_03432 0.26 -2.0 3,621,513 + MPMX20_03432 0.40 -2.8 3,621,513 + MPMX20_03432 0.40 +0.2 3,621,521 - MPMX20_03432 0.41 -1.2 3,621,591 + MPMX20_03432 0.49 +2.3 3,621,591 + MPMX20_03432 0.49 +1.2 3,621,591 + MPMX20_03432 0.49 +1.9 3,621,591 + MPMX20_03432 0.49 +1.2 3,621,591 + MPMX20_03432 0.49 +1.7 3,621,591 + MPMX20_03432 0.49 +0.9 3,621,591 + MPMX20_03432 0.49 -1.3 3,621,591 + MPMX20_03432 0.49 +1.0 3,621,591 + MPMX20_03432 0.49 +1.8 3,621,599 - MPMX20_03432 0.50 +1.5 3,621,599 - MPMX20_03432 0.50 +1.2 3,621,599 - MPMX20_03432 0.50 -0.7 3,621,599 - MPMX20_03432 0.50 -3.8 3,621,599 - MPMX20_03432 0.50 +1.5 3,621,599 - MPMX20_03432 0.50 -2.2 3,621,599 - MPMX20_03432 0.50 -3.3 3,621,599 - MPMX20_03432 0.50 -1.8 3,621,599 - MPMX20_03432 0.50 +4.5 3,621,683 - MPMX20_03432 0.60 +0.2 3,621,685 + MPMX20_03432 0.60 -0.8 3,621,685 + MPMX20_03432 0.60 -0.3 3,621,685 + MPMX20_03432 0.60 +0.8 3,621,733 + MPMX20_03432 0.66 -3.0 3,621,855 + MPMX20_03432 0.80 -2.1 3,621,864 - MPMX20_03432 0.81 -2.6 3,621,948 + +0.8 3,621,948 - -1.5 3,621,983 - -0.7 3,621,996 + +1.3 3,622,004 - -2.5 3,622,004 - -3.0 3,622,004 - -2.4 3,622,018 + +0.2
Or see this region's nucleotide sequence