Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03301

Experiment: octanoate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03300 and MPMX20_03301 are separated by 207 nucleotidesMPMX20_03301 and MPMX20_03302 overlap by 4 nucleotides MPMX20_03300: MPMX20_03300 - Purine nucleoside phosphorylase 2, at 3,469,333 to 3,470,157 _03300 MPMX20_03301: MPMX20_03301 - hypothetical protein, at 3,470,365 to 3,470,706 _03301 MPMX20_03302: MPMX20_03302 - HTH-type transcriptional regulator CynR, at 3,470,703 to 3,471,638 _03302 Position (kb) 3470 3471Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 3469.365 kb on + strandat 3469.430 kb on - strand, within MPMX20_03300at 3469.432 kb on + strand, within MPMX20_03300at 3469.440 kb on - strand, within MPMX20_03300at 3469.449 kb on + strand, within MPMX20_03300at 3469.485 kb on - strand, within MPMX20_03300at 3469.564 kb on - strand, within MPMX20_03300at 3469.582 kb on - strand, within MPMX20_03300at 3469.600 kb on - strand, within MPMX20_03300at 3469.616 kb on - strand, within MPMX20_03300at 3469.646 kb on + strand, within MPMX20_03300at 3469.656 kb on - strand, within MPMX20_03300at 3469.831 kb on - strand, within MPMX20_03300at 3469.831 kb on - strand, within MPMX20_03300at 3469.836 kb on - strand, within MPMX20_03300at 3469.851 kb on - strand, within MPMX20_03300at 3469.898 kb on + strand, within MPMX20_03300at 3469.975 kb on + strand, within MPMX20_03300at 3470.022 kb on + strand, within MPMX20_03300at 3470.025 kb on - strand, within MPMX20_03300at 3470.030 kb on - strand, within MPMX20_03300at 3470.030 kb on - strand, within MPMX20_03300at 3470.064 kb on - strand, within MPMX20_03300at 3470.069 kb on - strand, within MPMX20_03300at 3470.202 kb on + strandat 3470.210 kb on - strandat 3470.210 kb on - strandat 3470.265 kb on - strandat 3470.322 kb on - strandat 3470.322 kb on - strandat 3470.338 kb on - strandat 3470.342 kb on + strandat 3470.350 kb on - strandat 3470.379 kb on + strandat 3470.381 kb on - strandat 3470.403 kb on - strand, within MPMX20_03301at 3470.403 kb on - strand, within MPMX20_03301at 3470.446 kb on + strand, within MPMX20_03301at 3470.492 kb on - strand, within MPMX20_03301at 3470.711 kb on + strandat 3470.718 kb on + strandat 3470.742 kb on + strandat 3470.750 kb on - strandat 3470.797 kb on + strand, within MPMX20_03302at 3470.797 kb on + strand, within MPMX20_03302at 3470.797 kb on + strand, within MPMX20_03302at 3470.797 kb on + strand, within MPMX20_03302at 3470.797 kb on + strand, within MPMX20_03302at 3470.895 kb on + strand, within MPMX20_03302at 3470.943 kb on - strand, within MPMX20_03302at 3470.976 kb on + strand, within MPMX20_03302at 3470.998 kb on - strand, within MPMX20_03302at 3471.057 kb on + strand, within MPMX20_03302at 3471.150 kb on - strand, within MPMX20_03302at 3471.224 kb on - strand, within MPMX20_03302at 3471.239 kb on - strand, within MPMX20_03302at 3471.289 kb on + strand, within MPMX20_03302at 3471.297 kb on - strand, within MPMX20_03302at 3471.299 kb on + strand, within MPMX20_03302at 3471.299 kb on + strand, within MPMX20_03302at 3471.299 kb on + strand, within MPMX20_03302at 3471.299 kb on + strand, within MPMX20_03302at 3471.301 kb on + strand, within MPMX20_03302at 3471.307 kb on - strand, within MPMX20_03302at 3471.307 kb on - strand, within MPMX20_03302at 3471.307 kb on - strand, within MPMX20_03302at 3471.307 kb on - strand, within MPMX20_03302at 3471.307 kb on - strand, within MPMX20_03302at 3471.307 kb on - strand, within MPMX20_03302at 3471.309 kb on - strand, within MPMX20_03302at 3471.309 kb on - strand, within MPMX20_03302at 3471.309 kb on - strand, within MPMX20_03302at 3471.336 kb on - strand, within MPMX20_03302at 3471.366 kb on - strand, within MPMX20_03302at 3471.386 kb on + strand, within MPMX20_03302at 3471.439 kb on + strand, within MPMX20_03302at 3471.548 kb on + strandat 3471.556 kb on - strandat 3471.593 kb on + strandat 3471.602 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
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3,469,365 + -3.9
3,469,430 - MPMX20_03300 0.12 -1.4
3,469,432 + MPMX20_03300 0.12 +0.5
3,469,440 - MPMX20_03300 0.13 +0.2
3,469,449 + MPMX20_03300 0.14 -0.6
3,469,485 - MPMX20_03300 0.18 +0.8
3,469,564 - MPMX20_03300 0.28 -0.0
3,469,582 - MPMX20_03300 0.30 +1.9
3,469,600 - MPMX20_03300 0.32 -0.5
3,469,616 - MPMX20_03300 0.34 +0.3
3,469,646 + MPMX20_03300 0.38 -2.4
3,469,656 - MPMX20_03300 0.39 +1.7
3,469,831 - MPMX20_03300 0.60 -2.1
3,469,831 - MPMX20_03300 0.60 +0.5
3,469,836 - MPMX20_03300 0.61 -0.1
3,469,851 - MPMX20_03300 0.63 +0.6
3,469,898 + MPMX20_03300 0.68 +1.6
3,469,975 + MPMX20_03300 0.78 +2.0
3,470,022 + MPMX20_03300 0.84 -3.2
3,470,025 - MPMX20_03300 0.84 -0.4
3,470,030 - MPMX20_03300 0.84 +1.4
3,470,030 - MPMX20_03300 0.84 +0.7
3,470,064 - MPMX20_03300 0.89 -2.7
3,470,069 - MPMX20_03300 0.89 -0.9
3,470,202 + -2.3
3,470,210 - +0.5
3,470,210 - +2.5
3,470,265 - +1.2
3,470,322 - -1.7
3,470,322 - -2.7
3,470,338 - -0.9
3,470,342 + -4.2
3,470,350 - -2.9
3,470,379 + +0.5
3,470,381 - +2.4
3,470,403 - MPMX20_03301 0.11 +1.5
3,470,403 - MPMX20_03301 0.11 +3.5
3,470,446 + MPMX20_03301 0.24 +2.0
3,470,492 - MPMX20_03301 0.37 -2.0
3,470,711 + +0.9
3,470,718 + +1.3
3,470,742 + +1.8
3,470,750 - +0.5
3,470,797 + MPMX20_03302 0.10 -3.0
3,470,797 + MPMX20_03302 0.10 -1.2
3,470,797 + MPMX20_03302 0.10 -2.3
3,470,797 + MPMX20_03302 0.10 -1.3
3,470,797 + MPMX20_03302 0.10 +0.7
3,470,895 + MPMX20_03302 0.21 +1.3
3,470,943 - MPMX20_03302 0.26 -2.7
3,470,976 + MPMX20_03302 0.29 +1.2
3,470,998 - MPMX20_03302 0.32 -1.1
3,471,057 + MPMX20_03302 0.38 -3.1
3,471,150 - MPMX20_03302 0.48 +2.2
3,471,224 - MPMX20_03302 0.56 -0.1
3,471,239 - MPMX20_03302 0.57 +1.2
3,471,289 + MPMX20_03302 0.63 -1.9
3,471,297 - MPMX20_03302 0.63 -1.3
3,471,299 + MPMX20_03302 0.64 -0.1
3,471,299 + MPMX20_03302 0.64 +3.3
3,471,299 + MPMX20_03302 0.64 -1.4
3,471,299 + MPMX20_03302 0.64 -0.7
3,471,301 + MPMX20_03302 0.64 -2.6
3,471,307 - MPMX20_03302 0.65 +1.8
3,471,307 - MPMX20_03302 0.65 +0.2
3,471,307 - MPMX20_03302 0.65 +1.4
3,471,307 - MPMX20_03302 0.65 +2.1
3,471,307 - MPMX20_03302 0.65 +3.1
3,471,307 - MPMX20_03302 0.65 -0.7
3,471,309 - MPMX20_03302 0.65 -0.8
3,471,309 - MPMX20_03302 0.65 -1.4
3,471,309 - MPMX20_03302 0.65 -3.1
3,471,336 - MPMX20_03302 0.68 +1.5
3,471,366 - MPMX20_03302 0.71 +1.1
3,471,386 + MPMX20_03302 0.73 -0.7
3,471,439 + MPMX20_03302 0.79 -1.1
3,471,548 + -1.7
3,471,556 - -3.0
3,471,593 + +0.5
3,471,602 - +1.0

Or see this region's nucleotide sequence