Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03286

Experiment: octanoate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03284 and MPMX20_03285 are separated by 127 nucleotidesMPMX20_03285 and MPMX20_03286 are separated by 61 nucleotidesMPMX20_03286 and MPMX20_03287 are separated by 350 nucleotides MPMX20_03284: MPMX20_03284 - L-glyceraldehyde 3-phosphate reductase, at 3,456,997 to 3,457,995 _03284 MPMX20_03285: MPMX20_03285 - hypothetical protein, at 3,458,123 to 3,458,470 _03285 MPMX20_03286: MPMX20_03286 - Divalent metal cation transporter MntH, at 3,458,532 to 3,459,770 _03286 MPMX20_03287: MPMX20_03287 - Nucleoside permease NupC, at 3,460,121 to 3,461,308 _03287 Position (kb) 3458 3459 3460Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 3457.548 kb on + strand, within MPMX20_03284at 3457.590 kb on + strand, within MPMX20_03284at 3457.598 kb on - strand, within MPMX20_03284at 3457.748 kb on + strand, within MPMX20_03284at 3457.748 kb on + strand, within MPMX20_03284at 3457.850 kb on - strand, within MPMX20_03284at 3457.871 kb on + strand, within MPMX20_03284at 3457.871 kb on + strand, within MPMX20_03284at 3457.881 kb on + strand, within MPMX20_03284at 3457.975 kb on + strandat 3457.975 kb on + strandat 3457.983 kb on - strandat 3457.985 kb on + strandat 3457.985 kb on + strandat 3458.119 kb on + strandat 3458.385 kb on - strand, within MPMX20_03285at 3458.441 kb on + strandat 3458.450 kb on + strandat 3458.538 kb on + strandat 3458.543 kb on + strandat 3458.546 kb on - strandat 3458.546 kb on - strandat 3458.546 kb on - strandat 3458.548 kb on + strandat 3458.625 kb on + strandat 3458.625 kb on + strandat 3458.625 kb on + strandat 3458.625 kb on + strandat 3458.689 kb on - strand, within MPMX20_03286at 3458.739 kb on + strand, within MPMX20_03286at 3458.794 kb on + strand, within MPMX20_03286at 3458.824 kb on - strand, within MPMX20_03286at 3458.861 kb on - strand, within MPMX20_03286at 3458.869 kb on - strand, within MPMX20_03286at 3458.936 kb on + strand, within MPMX20_03286at 3458.941 kb on + strand, within MPMX20_03286at 3458.943 kb on - strand, within MPMX20_03286at 3459.010 kb on + strand, within MPMX20_03286at 3459.091 kb on - strand, within MPMX20_03286at 3459.159 kb on - strand, within MPMX20_03286at 3459.193 kb on + strand, within MPMX20_03286at 3459.193 kb on - strand, within MPMX20_03286at 3459.193 kb on - strand, within MPMX20_03286at 3459.273 kb on - strand, within MPMX20_03286at 3459.273 kb on - strand, within MPMX20_03286at 3459.364 kb on + strand, within MPMX20_03286at 3459.379 kb on + strand, within MPMX20_03286at 3459.387 kb on - strand, within MPMX20_03286at 3459.397 kb on - strand, within MPMX20_03286at 3459.486 kb on - strand, within MPMX20_03286at 3459.550 kb on - strand, within MPMX20_03286at 3459.574 kb on - strand, within MPMX20_03286at 3459.590 kb on + strand, within MPMX20_03286at 3459.607 kb on + strand, within MPMX20_03286at 3459.608 kb on + strand, within MPMX20_03286at 3459.615 kb on - strand, within MPMX20_03286at 3459.700 kb on + strandat 3459.733 kb on + strandat 3459.741 kb on - strandat 3459.742 kb on + strandat 3459.742 kb on + strandat 3459.744 kb on + strandat 3459.750 kb on - strandat 3459.752 kb on - strandat 3459.801 kb on + strandat 3459.801 kb on + strandat 3459.809 kb on - strandat 3459.877 kb on - strandat 3460.034 kb on - strandat 3460.047 kb on - strandat 3460.126 kb on - strandat 3460.126 kb on - strandat 3460.126 kb on - strandat 3460.126 kb on - strandat 3460.158 kb on + strandat 3460.188 kb on - strandat 3460.193 kb on - strandat 3460.297 kb on - strand, within MPMX20_03287at 3460.329 kb on - strand, within MPMX20_03287at 3460.376 kb on + strand, within MPMX20_03287at 3460.384 kb on - strand, within MPMX20_03287at 3460.430 kb on - strand, within MPMX20_03287at 3460.430 kb on - strand, within MPMX20_03287at 3460.440 kb on - strand, within MPMX20_03287at 3460.457 kb on - strand, within MPMX20_03287at 3460.503 kb on - strand, within MPMX20_03287at 3460.545 kb on + strand, within MPMX20_03287at 3460.550 kb on - strand, within MPMX20_03287at 3460.570 kb on + strand, within MPMX20_03287at 3460.621 kb on + strand, within MPMX20_03287at 3460.679 kb on - strand, within MPMX20_03287at 3460.715 kb on + strand, within MPMX20_03287at 3460.723 kb on - strand, within MPMX20_03287at 3460.723 kb on - strand, within MPMX20_03287at 3460.726 kb on + strand, within MPMX20_03287at 3460.734 kb on - strand, within MPMX20_03287at 3460.761 kb on - strand, within MPMX20_03287

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Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
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3,457,548 + MPMX20_03284 0.55 -0.1
3,457,590 + MPMX20_03284 0.59 -2.3
3,457,598 - MPMX20_03284 0.60 -0.6
3,457,748 + MPMX20_03284 0.75 -2.7
3,457,748 + MPMX20_03284 0.75 -3.1
3,457,850 - MPMX20_03284 0.85 +0.5
3,457,871 + MPMX20_03284 0.87 -0.7
3,457,871 + MPMX20_03284 0.87 -3.1
3,457,881 + MPMX20_03284 0.88 -2.5
3,457,975 + -1.0
3,457,975 + +3.4
3,457,983 - -3.3
3,457,985 + -2.8
3,457,985 + -3.1
3,458,119 + +4.3
3,458,385 - MPMX20_03285 0.75 +1.2
3,458,441 + +0.9
3,458,450 + -2.3
3,458,538 + +0.1
3,458,543 + -2.7
3,458,546 - +0.9
3,458,546 - +2.6
3,458,546 - +0.9
3,458,548 + +2.0
3,458,625 + -3.4
3,458,625 + -3.7
3,458,625 + -0.6
3,458,625 + +2.1
3,458,689 - MPMX20_03286 0.13 +1.5
3,458,739 + MPMX20_03286 0.17 +1.3
3,458,794 + MPMX20_03286 0.21 -2.8
3,458,824 - MPMX20_03286 0.24 -3.6
3,458,861 - MPMX20_03286 0.27 +1.6
3,458,869 - MPMX20_03286 0.27 +2.0
3,458,936 + MPMX20_03286 0.33 +2.8
3,458,941 + MPMX20_03286 0.33 -2.1
3,458,943 - MPMX20_03286 0.33 -2.7
3,459,010 + MPMX20_03286 0.39 +0.9
3,459,091 - MPMX20_03286 0.45 +3.7
3,459,159 - MPMX20_03286 0.51 +1.7
3,459,193 + MPMX20_03286 0.53 -0.5
3,459,193 - MPMX20_03286 0.53 +0.5
3,459,193 - MPMX20_03286 0.53 +3.6
3,459,273 - MPMX20_03286 0.60 +1.1
3,459,273 - MPMX20_03286 0.60 +1.5
3,459,364 + MPMX20_03286 0.67 +0.9
3,459,379 + MPMX20_03286 0.68 -1.7
3,459,387 - MPMX20_03286 0.69 -3.0
3,459,397 - MPMX20_03286 0.70 -3.1
3,459,486 - MPMX20_03286 0.77 +1.9
3,459,550 - MPMX20_03286 0.82 -3.3
3,459,574 - MPMX20_03286 0.84 -2.3
3,459,590 + MPMX20_03286 0.85 -1.2
3,459,607 + MPMX20_03286 0.87 -0.5
3,459,608 + MPMX20_03286 0.87 -4.0
3,459,615 - MPMX20_03286 0.87 +1.5
3,459,700 + -1.5
3,459,733 + -0.1
3,459,741 - -2.4
3,459,742 + -0.5
3,459,742 + -1.7
3,459,744 + +1.2
3,459,750 - +1.7
3,459,752 - -1.3
3,459,801 + -2.2
3,459,801 + -2.3
3,459,809 - -2.2
3,459,877 - -3.0
3,460,034 - -2.1
3,460,047 - -2.2
3,460,126 - +2.9
3,460,126 - +1.6
3,460,126 - +3.2
3,460,126 - -1.7
3,460,158 + -2.3
3,460,188 - +0.6
3,460,193 - -1.6
3,460,297 - MPMX20_03287 0.15 +1.3
3,460,329 - MPMX20_03287 0.18 -1.8
3,460,376 + MPMX20_03287 0.21 -2.8
3,460,384 - MPMX20_03287 0.22 +1.8
3,460,430 - MPMX20_03287 0.26 -2.2
3,460,430 - MPMX20_03287 0.26 -3.6
3,460,440 - MPMX20_03287 0.27 +1.4
3,460,457 - MPMX20_03287 0.28 -1.1
3,460,503 - MPMX20_03287 0.32 +0.1
3,460,545 + MPMX20_03287 0.36 +1.8
3,460,550 - MPMX20_03287 0.36 -0.9
3,460,570 + MPMX20_03287 0.38 +0.2
3,460,621 + MPMX20_03287 0.42 -1.8
3,460,679 - MPMX20_03287 0.47 -2.2
3,460,715 + MPMX20_03287 0.50 -0.1
3,460,723 - MPMX20_03287 0.51 -1.3
3,460,723 - MPMX20_03287 0.51 +1.1
3,460,726 + MPMX20_03287 0.51 -0.3
3,460,734 - MPMX20_03287 0.52 +0.9
3,460,761 - MPMX20_03287 0.54 -0.7

Or see this region's nucleotide sequence