Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03137 and MPMX20_03138 are separated by 204 nucleotides MPMX20_03138 and MPMX20_03139 are separated by 123 nucleotides
MPMX20_03137: MPMX20_03137 - Mannonate dehydratase, at 3,296,392 to 3,297,582
_03137
MPMX20_03138: MPMX20_03138 - Polyol:NADP oxidoreductase, at 3,297,787 to 3,299,253
_03138
MPMX20_03139: MPMX20_03139 - Zinc-binding GTPase YeiR, at 3,299,377 to 3,300,363
_03139
Position (kb)
3297
3298
3299
3300 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 3296.854 kb on + strand, within MPMX20_03137 at 3296.862 kb on - strand, within MPMX20_03137 at 3296.920 kb on + strand, within MPMX20_03137 at 3296.930 kb on - strand, within MPMX20_03137 at 3297.015 kb on + strand, within MPMX20_03137 at 3297.017 kb on - strand, within MPMX20_03137 at 3297.027 kb on + strand, within MPMX20_03137 at 3297.027 kb on + strand, within MPMX20_03137 at 3297.035 kb on - strand, within MPMX20_03137 at 3297.045 kb on - strand, within MPMX20_03137 at 3297.092 kb on + strand, within MPMX20_03137 at 3297.092 kb on + strand, within MPMX20_03137 at 3297.210 kb on + strand, within MPMX20_03137 at 3297.218 kb on - strand, within MPMX20_03137 at 3297.266 kb on + strand, within MPMX20_03137 at 3297.324 kb on + strand, within MPMX20_03137 at 3297.404 kb on + strand, within MPMX20_03137 at 3297.404 kb on + strand, within MPMX20_03137 at 3297.407 kb on - strand, within MPMX20_03137 at 3297.412 kb on - strand, within MPMX20_03137 at 3297.417 kb on - strand, within MPMX20_03137 at 3297.442 kb on + strand, within MPMX20_03137 at 3297.461 kb on + strand, within MPMX20_03137 at 3297.462 kb on + strand, within MPMX20_03137 at 3297.469 kb on - strand at 3297.484 kb on - strand at 3297.520 kb on - strand at 3297.566 kb on + strand at 3297.566 kb on + strand at 3297.566 kb on + strand at 3297.574 kb on - strand at 3297.574 kb on - strand at 3297.598 kb on - strand at 3297.661 kb on + strand at 3297.664 kb on - strand at 3297.740 kb on + strand at 3297.823 kb on + strand at 3297.850 kb on + strand at 3297.901 kb on + strand at 3297.901 kb on + strand at 3297.901 kb on + strand at 3297.909 kb on - strand at 3297.920 kb on + strand at 3297.970 kb on - strand, within MPMX20_03138 at 3297.985 kb on + strand, within MPMX20_03138 at 3298.017 kb on + strand, within MPMX20_03138 at 3298.045 kb on + strand, within MPMX20_03138 at 3298.053 kb on - strand, within MPMX20_03138 at 3298.148 kb on + strand, within MPMX20_03138 at 3298.161 kb on + strand, within MPMX20_03138 at 3298.171 kb on - strand, within MPMX20_03138 at 3298.171 kb on - strand, within MPMX20_03138 at 3298.171 kb on - strand, within MPMX20_03138 at 3298.229 kb on - strand, within MPMX20_03138 at 3298.255 kb on + strand, within MPMX20_03138 at 3298.322 kb on + strand, within MPMX20_03138 at 3298.369 kb on - strand, within MPMX20_03138 at 3298.381 kb on + strand, within MPMX20_03138 at 3298.414 kb on - strand, within MPMX20_03138 at 3298.435 kb on + strand, within MPMX20_03138 at 3298.443 kb on - strand, within MPMX20_03138 at 3298.452 kb on + strand, within MPMX20_03138 at 3298.452 kb on + strand, within MPMX20_03138 at 3298.452 kb on + strand, within MPMX20_03138 at 3298.552 kb on - strand, within MPMX20_03138 at 3298.668 kb on + strand, within MPMX20_03138 at 3298.736 kb on + strand, within MPMX20_03138 at 3298.744 kb on - strand, within MPMX20_03138 at 3298.772 kb on + strand, within MPMX20_03138 at 3298.772 kb on + strand, within MPMX20_03138 at 3298.772 kb on + strand, within MPMX20_03138 at 3298.772 kb on + strand, within MPMX20_03138 at 3298.791 kb on + strand, within MPMX20_03138 at 3298.794 kb on - strand, within MPMX20_03138 at 3298.795 kb on + strand, within MPMX20_03138 at 3298.801 kb on - strand, within MPMX20_03138 at 3299.018 kb on + strand, within MPMX20_03138 at 3299.026 kb on - strand, within MPMX20_03138 at 3299.109 kb on + strand at 3299.131 kb on + strand at 3299.188 kb on - strand at 3299.264 kb on + strand at 3299.295 kb on + strand at 3299.308 kb on - strand at 3299.484 kb on - strand, within MPMX20_03139 at 3299.532 kb on - strand, within MPMX20_03139 at 3299.664 kb on - strand, within MPMX20_03139 at 3299.750 kb on + strand, within MPMX20_03139 at 3299.750 kb on + strand, within MPMX20_03139 at 3299.859 kb on - strand, within MPMX20_03139 at 3299.862 kb on + strand, within MPMX20_03139 at 3299.864 kb on - strand, within MPMX20_03139 at 3299.879 kb on - strand, within MPMX20_03139 at 3299.884 kb on - strand, within MPMX20_03139 at 3300.006 kb on - strand, within MPMX20_03139 at 3300.031 kb on + strand, within MPMX20_03139 at 3300.077 kb on - strand, within MPMX20_03139 at 3300.077 kb on - strand, within MPMX20_03139 at 3300.079 kb on + strand, within MPMX20_03139 at 3300.156 kb on - strand, within MPMX20_03139 at 3300.162 kb on + strand, within MPMX20_03139 at 3300.170 kb on - strand, within MPMX20_03139 at 3300.170 kb on - strand, within MPMX20_03139 at 3300.186 kb on - strand, within MPMX20_03139 at 3300.197 kb on + strand, within MPMX20_03139 at 3300.206 kb on + strand, within MPMX20_03139 at 3300.206 kb on + strand, within MPMX20_03139 at 3300.206 kb on + strand, within MPMX20_03139 at 3300.214 kb on - strand, within MPMX20_03139 at 3300.214 kb on - strand, within MPMX20_03139
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 3,296,854 + MPMX20_03137 0.39 +1.8 3,296,862 - MPMX20_03137 0.39 -2.5 3,296,920 + MPMX20_03137 0.44 -0.4 3,296,930 - MPMX20_03137 0.45 -0.6 3,297,015 + MPMX20_03137 0.52 +0.2 3,297,017 - MPMX20_03137 0.52 -1.6 3,297,027 + MPMX20_03137 0.53 +1.1 3,297,027 + MPMX20_03137 0.53 +1.5 3,297,035 - MPMX20_03137 0.54 +3.1 3,297,045 - MPMX20_03137 0.55 +0.9 3,297,092 + MPMX20_03137 0.59 -3.3 3,297,092 + MPMX20_03137 0.59 -1.9 3,297,210 + MPMX20_03137 0.69 -0.9 3,297,218 - MPMX20_03137 0.69 -0.9 3,297,266 + MPMX20_03137 0.73 +0.8 3,297,324 + MPMX20_03137 0.78 +1.5 3,297,404 + MPMX20_03137 0.85 -1.0 3,297,404 + MPMX20_03137 0.85 -2.0 3,297,407 - MPMX20_03137 0.85 -1.9 3,297,412 - MPMX20_03137 0.86 +1.0 3,297,417 - MPMX20_03137 0.86 -0.1 3,297,442 + MPMX20_03137 0.88 +0.8 3,297,461 + MPMX20_03137 0.90 +0.1 3,297,462 + MPMX20_03137 0.90 +1.2 3,297,469 - +1.4 3,297,484 - -3.1 3,297,520 - +3.1 3,297,566 + -3.5 3,297,566 + +1.8 3,297,566 + +1.4 3,297,574 - +0.7 3,297,574 - -1.9 3,297,598 - -4.1 3,297,661 + -0.8 3,297,664 - +0.2 3,297,740 + +1.6 3,297,823 + +2.0 3,297,850 + +1.4 3,297,901 + +0.2 3,297,901 + +2.1 3,297,901 + +1.4 3,297,909 - -3.0 3,297,920 + -1.7 3,297,970 - MPMX20_03138 0.12 +1.3 3,297,985 + MPMX20_03138 0.13 +0.6 3,298,017 + MPMX20_03138 0.16 -0.6 3,298,045 + MPMX20_03138 0.18 +0.6 3,298,053 - MPMX20_03138 0.18 +1.4 3,298,148 + MPMX20_03138 0.25 +2.7 3,298,161 + MPMX20_03138 0.25 +2.3 3,298,171 - MPMX20_03138 0.26 +2.4 3,298,171 - MPMX20_03138 0.26 +2.9 3,298,171 - MPMX20_03138 0.26 -1.7 3,298,229 - MPMX20_03138 0.30 +2.5 3,298,255 + MPMX20_03138 0.32 -2.7 3,298,322 + MPMX20_03138 0.36 -1.4 3,298,369 - MPMX20_03138 0.40 -1.1 3,298,381 + MPMX20_03138 0.40 -0.9 3,298,414 - MPMX20_03138 0.43 -2.2 3,298,435 + MPMX20_03138 0.44 +2.2 3,298,443 - MPMX20_03138 0.45 +0.6 3,298,452 + MPMX20_03138 0.45 +1.1 3,298,452 + MPMX20_03138 0.45 -0.1 3,298,452 + MPMX20_03138 0.45 -0.6 3,298,552 - MPMX20_03138 0.52 -0.6 3,298,668 + MPMX20_03138 0.60 +2.3 3,298,736 + MPMX20_03138 0.65 +2.3 3,298,744 - MPMX20_03138 0.65 -2.6 3,298,772 + MPMX20_03138 0.67 +1.5 3,298,772 + MPMX20_03138 0.67 -2.9 3,298,772 + MPMX20_03138 0.67 -3.0 3,298,772 + MPMX20_03138 0.67 -3.6 3,298,791 + MPMX20_03138 0.68 -0.4 3,298,794 - MPMX20_03138 0.69 -3.3 3,298,795 + MPMX20_03138 0.69 +2.4 3,298,801 - MPMX20_03138 0.69 +2.7 3,299,018 + MPMX20_03138 0.84 -2.1 3,299,026 - MPMX20_03138 0.84 +2.8 3,299,109 + +1.3 3,299,131 + -2.6 3,299,188 - -2.7 3,299,264 + +0.5 3,299,295 + +1.0 3,299,308 - -3.6 3,299,484 - MPMX20_03139 0.11 +1.3 3,299,532 - MPMX20_03139 0.16 -1.8 3,299,664 - MPMX20_03139 0.29 +0.5 3,299,750 + MPMX20_03139 0.38 -1.8 3,299,750 + MPMX20_03139 0.38 -1.8 3,299,859 - MPMX20_03139 0.49 -0.1 3,299,862 + MPMX20_03139 0.49 +0.4 3,299,864 - MPMX20_03139 0.49 +1.2 3,299,879 - MPMX20_03139 0.51 -3.1 3,299,884 - MPMX20_03139 0.51 -0.2 3,300,006 - MPMX20_03139 0.64 -2.0 3,300,031 + MPMX20_03139 0.66 -2.8 3,300,077 - MPMX20_03139 0.71 +0.5 3,300,077 - MPMX20_03139 0.71 -0.1 3,300,079 + MPMX20_03139 0.71 +1.4 3,300,156 - MPMX20_03139 0.79 -0.5 3,300,162 + MPMX20_03139 0.80 -1.5 3,300,170 - MPMX20_03139 0.80 +0.7 3,300,170 - MPMX20_03139 0.80 -0.9 3,300,186 - MPMX20_03139 0.82 +0.5 3,300,197 + MPMX20_03139 0.83 +0.5 3,300,206 + MPMX20_03139 0.84 +1.1 3,300,206 + MPMX20_03139 0.84 -3.4 3,300,206 + MPMX20_03139 0.84 +1.0 3,300,214 - MPMX20_03139 0.85 +1.4 3,300,214 - MPMX20_03139 0.85 -0.0
Or see this region's nucleotide sequence