Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03121

Experiment: octanoate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03120 and MPMX20_03121 are separated by 295 nucleotidesMPMX20_03121 and MPMX20_03122 are separated by 155 nucleotides MPMX20_03120: MPMX20_03120 - D-galactose-binding periplasmic protein, at 3,276,598 to 3,277,596 _03120 MPMX20_03121: MPMX20_03121 - HTH-type transcriptional regulator GalS, at 3,277,892 to 3,278,914 _03121 MPMX20_03122: MPMX20_03122 - hypothetical protein, at 3,279,070 to 3,280,227 _03122 Position (kb) 3277 3278 3279Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 3276.942 kb on + strand, within MPMX20_03120at 3276.950 kb on - strand, within MPMX20_03120at 3276.960 kb on - strand, within MPMX20_03120at 3276.982 kb on - strand, within MPMX20_03120at 3277.025 kb on + strand, within MPMX20_03120at 3277.070 kb on + strand, within MPMX20_03120at 3277.074 kb on + strand, within MPMX20_03120at 3277.108 kb on - strand, within MPMX20_03120at 3277.108 kb on - strand, within MPMX20_03120at 3277.123 kb on - strand, within MPMX20_03120at 3277.125 kb on + strand, within MPMX20_03120at 3277.140 kb on - strand, within MPMX20_03120at 3277.158 kb on - strand, within MPMX20_03120at 3277.168 kb on + strand, within MPMX20_03120at 3277.176 kb on - strand, within MPMX20_03120at 3277.202 kb on - strand, within MPMX20_03120at 3277.205 kb on + strand, within MPMX20_03120at 3277.228 kb on + strand, within MPMX20_03120at 3277.228 kb on + strand, within MPMX20_03120at 3277.236 kb on - strand, within MPMX20_03120at 3277.236 kb on - strand, within MPMX20_03120at 3277.236 kb on - strand, within MPMX20_03120at 3277.275 kb on + strand, within MPMX20_03120at 3277.327 kb on - strand, within MPMX20_03120at 3277.329 kb on + strand, within MPMX20_03120at 3277.344 kb on - strand, within MPMX20_03120at 3277.344 kb on - strand, within MPMX20_03120at 3277.352 kb on + strand, within MPMX20_03120at 3277.352 kb on + strand, within MPMX20_03120at 3277.360 kb on - strand, within MPMX20_03120at 3277.360 kb on - strand, within MPMX20_03120at 3277.422 kb on + strand, within MPMX20_03120at 3277.460 kb on + strand, within MPMX20_03120at 3277.517 kb on - strandat 3277.517 kb on - strandat 3277.519 kb on + strandat 3277.519 kb on + strandat 3277.527 kb on - strandat 3277.527 kb on - strandat 3277.575 kb on + strandat 3277.576 kb on + strandat 3277.576 kb on + strandat 3277.577 kb on + strandat 3277.584 kb on - strandat 3277.584 kb on - strandat 3277.584 kb on - strandat 3277.621 kb on + strandat 3277.629 kb on - strandat 3277.646 kb on + strandat 3277.728 kb on - strandat 3277.730 kb on - strandat 3277.922 kb on + strandat 3278.008 kb on - strand, within MPMX20_03121at 3278.051 kb on - strand, within MPMX20_03121at 3278.055 kb on + strand, within MPMX20_03121at 3278.062 kb on + strand, within MPMX20_03121at 3278.063 kb on - strand, within MPMX20_03121at 3278.063 kb on - strand, within MPMX20_03121at 3278.081 kb on - strand, within MPMX20_03121at 3278.081 kb on - strand, within MPMX20_03121at 3278.196 kb on + strand, within MPMX20_03121at 3278.227 kb on - strand, within MPMX20_03121at 3278.287 kb on - strand, within MPMX20_03121at 3278.298 kb on - strand, within MPMX20_03121at 3278.448 kb on + strand, within MPMX20_03121at 3278.473 kb on + strand, within MPMX20_03121at 3278.473 kb on - strand, within MPMX20_03121at 3278.478 kb on + strand, within MPMX20_03121at 3278.478 kb on - strand, within MPMX20_03121at 3278.491 kb on - strand, within MPMX20_03121at 3278.625 kb on - strand, within MPMX20_03121at 3278.676 kb on + strand, within MPMX20_03121at 3278.676 kb on + strand, within MPMX20_03121at 3278.676 kb on + strand, within MPMX20_03121at 3278.676 kb on + strand, within MPMX20_03121at 3278.676 kb on + strand, within MPMX20_03121at 3278.684 kb on - strand, within MPMX20_03121at 3278.684 kb on - strand, within MPMX20_03121at 3278.782 kb on + strand, within MPMX20_03121at 3278.784 kb on - strand, within MPMX20_03121at 3278.821 kb on + strandat 3278.826 kb on + strandat 3278.829 kb on - strandat 3278.944 kb on + strandat 3278.952 kb on - strandat 3279.104 kb on - strandat 3279.122 kb on + strandat 3279.122 kb on + strandat 3279.136 kb on - strandat 3279.227 kb on - strand, within MPMX20_03122at 3279.269 kb on + strand, within MPMX20_03122at 3279.271 kb on + strand, within MPMX20_03122at 3279.277 kb on - strand, within MPMX20_03122at 3279.277 kb on - strand, within MPMX20_03122at 3279.446 kb on - strand, within MPMX20_03122at 3279.524 kb on + strand, within MPMX20_03122at 3279.524 kb on + strand, within MPMX20_03122at 3279.590 kb on + strand, within MPMX20_03122at 3279.775 kb on - strand, within MPMX20_03122at 3279.817 kb on - strand, within MPMX20_03122at 3279.898 kb on + strand, within MPMX20_03122

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Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
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3,276,942 + MPMX20_03120 0.34 +0.9
3,276,950 - MPMX20_03120 0.35 -0.8
3,276,960 - MPMX20_03120 0.36 -1.4
3,276,982 - MPMX20_03120 0.38 -0.9
3,277,025 + MPMX20_03120 0.43 -0.1
3,277,070 + MPMX20_03120 0.47 -2.7
3,277,074 + MPMX20_03120 0.48 -1.3
3,277,108 - MPMX20_03120 0.51 -2.9
3,277,108 - MPMX20_03120 0.51 +0.2
3,277,123 - MPMX20_03120 0.53 -0.1
3,277,125 + MPMX20_03120 0.53 +2.0
3,277,140 - MPMX20_03120 0.54 +2.4
3,277,158 - MPMX20_03120 0.56 -0.1
3,277,168 + MPMX20_03120 0.57 +0.8
3,277,176 - MPMX20_03120 0.58 +0.6
3,277,202 - MPMX20_03120 0.60 +1.4
3,277,205 + MPMX20_03120 0.61 +0.6
3,277,228 + MPMX20_03120 0.63 -3.5
3,277,228 + MPMX20_03120 0.63 -2.6
3,277,236 - MPMX20_03120 0.64 +1.0
3,277,236 - MPMX20_03120 0.64 +3.0
3,277,236 - MPMX20_03120 0.64 -0.8
3,277,275 + MPMX20_03120 0.68 -1.6
3,277,327 - MPMX20_03120 0.73 -2.7
3,277,329 + MPMX20_03120 0.73 +0.5
3,277,344 - MPMX20_03120 0.75 -0.3
3,277,344 - MPMX20_03120 0.75 +1.9
3,277,352 + MPMX20_03120 0.75 -1.5
3,277,352 + MPMX20_03120 0.75 +2.7
3,277,360 - MPMX20_03120 0.76 +1.3
3,277,360 - MPMX20_03120 0.76 -2.4
3,277,422 + MPMX20_03120 0.82 -1.9
3,277,460 + MPMX20_03120 0.86 -2.6
3,277,517 - -2.1
3,277,517 - -0.9
3,277,519 + -2.7
3,277,519 + +0.6
3,277,527 - +0.2
3,277,527 - -1.2
3,277,575 + -1.1
3,277,576 + -1.4
3,277,576 + -2.4
3,277,577 + -3.2
3,277,584 - -0.8
3,277,584 - +1.2
3,277,584 - -1.1
3,277,621 + -3.2
3,277,629 - -1.9
3,277,646 + +2.0
3,277,728 - -3.2
3,277,730 - -1.4
3,277,922 + -2.6
3,278,008 - MPMX20_03121 0.11 -0.8
3,278,051 - MPMX20_03121 0.16 -2.4
3,278,055 + MPMX20_03121 0.16 +2.1
3,278,062 + MPMX20_03121 0.17 +1.1
3,278,063 - MPMX20_03121 0.17 +0.4
3,278,063 - MPMX20_03121 0.17 +3.6
3,278,081 - MPMX20_03121 0.18 +1.2
3,278,081 - MPMX20_03121 0.18 -0.8
3,278,196 + MPMX20_03121 0.30 -3.8
3,278,227 - MPMX20_03121 0.33 +0.6
3,278,287 - MPMX20_03121 0.39 +1.2
3,278,298 - MPMX20_03121 0.40 -0.6
3,278,448 + MPMX20_03121 0.54 +3.0
3,278,473 + MPMX20_03121 0.57 -2.4
3,278,473 - MPMX20_03121 0.57 +0.8
3,278,478 + MPMX20_03121 0.57 +1.5
3,278,478 - MPMX20_03121 0.57 +4.3
3,278,491 - MPMX20_03121 0.59 +2.5
3,278,625 - MPMX20_03121 0.72 +2.1
3,278,676 + MPMX20_03121 0.77 +0.2
3,278,676 + MPMX20_03121 0.77 +1.4
3,278,676 + MPMX20_03121 0.77 +2.0
3,278,676 + MPMX20_03121 0.77 -0.6
3,278,676 + MPMX20_03121 0.77 +0.3
3,278,684 - MPMX20_03121 0.77 +0.4
3,278,684 - MPMX20_03121 0.77 -3.5
3,278,782 + MPMX20_03121 0.87 -0.8
3,278,784 - MPMX20_03121 0.87 +0.6
3,278,821 + +0.2
3,278,826 + -2.3
3,278,829 - -0.9
3,278,944 + +2.3
3,278,952 - +0.2
3,279,104 - -3.9
3,279,122 + +2.2
3,279,122 + +0.2
3,279,136 - +0.2
3,279,227 - MPMX20_03122 0.14 -0.8
3,279,269 + MPMX20_03122 0.17 -0.8
3,279,271 + MPMX20_03122 0.17 +2.5
3,279,277 - MPMX20_03122 0.18 -1.5
3,279,277 - MPMX20_03122 0.18 +0.9
3,279,446 - MPMX20_03122 0.32 -1.9
3,279,524 + MPMX20_03122 0.39 -1.1
3,279,524 + MPMX20_03122 0.39 +0.8
3,279,590 + MPMX20_03122 0.45 +0.3
3,279,775 - MPMX20_03122 0.61 -1.1
3,279,817 - MPMX20_03122 0.65 -2.2
3,279,898 + MPMX20_03122 0.72 -0.8

Or see this region's nucleotide sequence