Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02569

Experiment: octanoate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02568 and MPMX20_02569 overlap by 4 nucleotidesMPMX20_02569 and MPMX20_02570 are separated by 140 nucleotidesMPMX20_02570 and MPMX20_02571 are separated by 334 nucleotides MPMX20_02568: MPMX20_02568 - hypothetical protein, at 2,706,887 to 2,708,098 _02568 MPMX20_02569: MPMX20_02569 - Putative sulfur carrier protein YedF, at 2,708,095 to 2,708,328 _02569 MPMX20_02570: MPMX20_02570 - Universal stress protein F, at 2,708,469 to 2,708,903 _02570 MPMX20_02571: MPMX20_02571 - Outer membrane protein W, at 2,709,238 to 2,709,870 _02571 Position (kb) 2708 2709Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 2707.104 kb on + strand, within MPMX20_02568at 2707.107 kb on - strand, within MPMX20_02568at 2707.109 kb on + strand, within MPMX20_02568at 2707.117 kb on - strand, within MPMX20_02568at 2707.117 kb on - strand, within MPMX20_02568at 2707.117 kb on - strand, within MPMX20_02568at 2707.117 kb on - strand, within MPMX20_02568at 2707.117 kb on - strand, within MPMX20_02568at 2707.117 kb on - strand, within MPMX20_02568at 2707.136 kb on - strand, within MPMX20_02568at 2707.143 kb on - strand, within MPMX20_02568at 2707.185 kb on + strand, within MPMX20_02568at 2707.271 kb on + strand, within MPMX20_02568at 2707.279 kb on + strand, within MPMX20_02568at 2707.286 kb on - strand, within MPMX20_02568at 2707.286 kb on - strand, within MPMX20_02568at 2707.286 kb on - strand, within MPMX20_02568at 2707.315 kb on + strand, within MPMX20_02568at 2707.336 kb on - strand, within MPMX20_02568at 2707.367 kb on - strand, within MPMX20_02568at 2707.408 kb on + strand, within MPMX20_02568at 2707.416 kb on - strand, within MPMX20_02568at 2707.517 kb on + strand, within MPMX20_02568at 2707.534 kb on + strand, within MPMX20_02568at 2707.631 kb on + strand, within MPMX20_02568at 2707.639 kb on - strand, within MPMX20_02568at 2707.774 kb on + strand, within MPMX20_02568at 2707.858 kb on - strand, within MPMX20_02568at 2707.865 kb on + strand, within MPMX20_02568at 2707.865 kb on + strand, within MPMX20_02568at 2707.873 kb on - strand, within MPMX20_02568at 2707.873 kb on - strand, within MPMX20_02568at 2707.873 kb on - strand, within MPMX20_02568at 2707.884 kb on + strand, within MPMX20_02568at 2707.884 kb on + strand, within MPMX20_02568at 2707.892 kb on - strand, within MPMX20_02568at 2707.941 kb on + strand, within MPMX20_02568at 2707.947 kb on + strand, within MPMX20_02568at 2707.947 kb on + strand, within MPMX20_02568at 2707.947 kb on + strand, within MPMX20_02568at 2707.947 kb on + strand, within MPMX20_02568at 2707.983 kb on - strandat 2708.005 kb on + strandat 2708.118 kb on - strandat 2708.139 kb on + strand, within MPMX20_02569at 2708.139 kb on + strand, within MPMX20_02569at 2708.147 kb on - strand, within MPMX20_02569at 2708.147 kb on - strand, within MPMX20_02569at 2708.186 kb on - strand, within MPMX20_02569at 2708.211 kb on + strand, within MPMX20_02569at 2708.265 kb on + strand, within MPMX20_02569at 2708.273 kb on - strand, within MPMX20_02569at 2708.273 kb on - strand, within MPMX20_02569at 2708.275 kb on + strand, within MPMX20_02569at 2708.283 kb on - strand, within MPMX20_02569at 2708.351 kb on - strandat 2708.353 kb on - strandat 2708.363 kb on - strandat 2708.410 kb on + strandat 2708.526 kb on - strand, within MPMX20_02570at 2708.533 kb on - strand, within MPMX20_02570at 2708.536 kb on + strand, within MPMX20_02570at 2708.538 kb on + strand, within MPMX20_02570at 2708.538 kb on + strand, within MPMX20_02570at 2708.538 kb on + strand, within MPMX20_02570at 2708.619 kb on + strand, within MPMX20_02570at 2708.619 kb on + strand, within MPMX20_02570at 2708.619 kb on + strand, within MPMX20_02570at 2708.624 kb on + strand, within MPMX20_02570at 2708.624 kb on + strand, within MPMX20_02570at 2708.627 kb on - strand, within MPMX20_02570at 2708.627 kb on - strand, within MPMX20_02570at 2708.627 kb on - strand, within MPMX20_02570at 2708.632 kb on - strand, within MPMX20_02570at 2708.692 kb on + strand, within MPMX20_02570at 2708.692 kb on + strand, within MPMX20_02570at 2708.710 kb on - strand, within MPMX20_02570at 2708.710 kb on - strand, within MPMX20_02570at 2708.710 kb on - strand, within MPMX20_02570at 2708.723 kb on + strand, within MPMX20_02570at 2708.724 kb on + strand, within MPMX20_02570at 2708.783 kb on + strand, within MPMX20_02570at 2708.788 kb on + strand, within MPMX20_02570at 2708.796 kb on - strand, within MPMX20_02570at 2708.836 kb on + strand, within MPMX20_02570at 2708.846 kb on + strand, within MPMX20_02570at 2708.897 kb on + strandat 2708.925 kb on + strandat 2708.962 kb on + strandat 2708.962 kb on + strandat 2708.962 kb on + strandat 2708.967 kb on + strandat 2708.968 kb on - strandat 2708.970 kb on - strandat 2708.975 kb on - strandat 2708.976 kb on - strandat 2709.003 kb on + strandat 2709.003 kb on + strandat 2709.061 kb on + strandat 2709.071 kb on + strandat 2709.077 kb on + strandat 2709.079 kb on - strandat 2709.082 kb on + strandat 2709.082 kb on + strandat 2709.090 kb on - strandat 2709.146 kb on - strandat 2709.153 kb on + strandat 2709.156 kb on - strandat 2709.165 kb on + strandat 2709.189 kb on - strandat 2709.197 kb on + strandat 2709.197 kb on + strandat 2709.197 kb on + strandat 2709.197 kb on + strandat 2709.197 kb on + strandat 2709.197 kb on + strandat 2709.197 kb on + strandat 2709.205 kb on - strandat 2709.205 kb on - strandat 2709.207 kb on + strandat 2709.208 kb on + strandat 2709.213 kb on + strandat 2709.213 kb on + strandat 2709.215 kb on - strandat 2709.216 kb on - strandat 2709.216 kb on - strandat 2709.221 kb on - strandat 2709.221 kb on - strandat 2709.222 kb on + strandat 2709.223 kb on + strandat 2709.230 kb on - strandat 2709.230 kb on - strandat 2709.231 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
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2,707,104 + MPMX20_02568 0.18 -1.1
2,707,107 - MPMX20_02568 0.18 +3.5
2,707,109 + MPMX20_02568 0.18 +0.1
2,707,117 - MPMX20_02568 0.19 +1.2
2,707,117 - MPMX20_02568 0.19 -0.8
2,707,117 - MPMX20_02568 0.19 -3.8
2,707,117 - MPMX20_02568 0.19 +2.1
2,707,117 - MPMX20_02568 0.19 -2.5
2,707,117 - MPMX20_02568 0.19 +2.3
2,707,136 - MPMX20_02568 0.21 -2.7
2,707,143 - MPMX20_02568 0.21 -2.5
2,707,185 + MPMX20_02568 0.25 -2.8
2,707,271 + MPMX20_02568 0.32 -2.8
2,707,279 + MPMX20_02568 0.32 +1.0
2,707,286 - MPMX20_02568 0.33 +1.9
2,707,286 - MPMX20_02568 0.33 +1.2
2,707,286 - MPMX20_02568 0.33 -2.3
2,707,315 + MPMX20_02568 0.35 +0.4
2,707,336 - MPMX20_02568 0.37 +0.9
2,707,367 - MPMX20_02568 0.40 -2.8
2,707,408 + MPMX20_02568 0.43 +1.0
2,707,416 - MPMX20_02568 0.44 +0.4
2,707,517 + MPMX20_02568 0.52 -3.6
2,707,534 + MPMX20_02568 0.53 -2.1
2,707,631 + MPMX20_02568 0.61 +0.5
2,707,639 - MPMX20_02568 0.62 +2.8
2,707,774 + MPMX20_02568 0.73 -2.3
2,707,858 - MPMX20_02568 0.80 -2.1
2,707,865 + MPMX20_02568 0.81 +1.6
2,707,865 + MPMX20_02568 0.81 -1.7
2,707,873 - MPMX20_02568 0.81 +2.0
2,707,873 - MPMX20_02568 0.81 +2.1
2,707,873 - MPMX20_02568 0.81 +1.6
2,707,884 + MPMX20_02568 0.82 -2.1
2,707,884 + MPMX20_02568 0.82 -2.2
2,707,892 - MPMX20_02568 0.83 +2.5
2,707,941 + MPMX20_02568 0.87 +2.4
2,707,947 + MPMX20_02568 0.87 +1.1
2,707,947 + MPMX20_02568 0.87 -2.4
2,707,947 + MPMX20_02568 0.87 -2.6
2,707,947 + MPMX20_02568 0.87 +2.2
2,707,983 - +0.9
2,708,005 + -2.2
2,708,118 - -1.7
2,708,139 + MPMX20_02569 0.19 +1.8
2,708,139 + MPMX20_02569 0.19 -0.6
2,708,147 - MPMX20_02569 0.22 -2.5
2,708,147 - MPMX20_02569 0.22 -2.4
2,708,186 - MPMX20_02569 0.39 +0.0
2,708,211 + MPMX20_02569 0.50 -2.3
2,708,265 + MPMX20_02569 0.73 -2.4
2,708,273 - MPMX20_02569 0.76 -1.8
2,708,273 - MPMX20_02569 0.76 -2.4
2,708,275 + MPMX20_02569 0.77 +0.0
2,708,283 - MPMX20_02569 0.80 -0.5
2,708,351 - +1.7
2,708,353 - +1.3
2,708,363 - +2.2
2,708,410 + -1.1
2,708,526 - MPMX20_02570 0.13 -3.9
2,708,533 - MPMX20_02570 0.15 +1.9
2,708,536 + MPMX20_02570 0.15 +2.0
2,708,538 + MPMX20_02570 0.16 -2.1
2,708,538 + MPMX20_02570 0.16 +1.2
2,708,538 + MPMX20_02570 0.16 -1.5
2,708,619 + MPMX20_02570 0.34 +0.6
2,708,619 + MPMX20_02570 0.34 +2.9
2,708,619 + MPMX20_02570 0.34 +1.3
2,708,624 + MPMX20_02570 0.36 -0.1
2,708,624 + MPMX20_02570 0.36 -0.2
2,708,627 - MPMX20_02570 0.36 -2.8
2,708,627 - MPMX20_02570 0.36 -0.5
2,708,627 - MPMX20_02570 0.36 -2.4
2,708,632 - MPMX20_02570 0.37 -2.4
2,708,692 + MPMX20_02570 0.51 -2.0
2,708,692 + MPMX20_02570 0.51 +1.5
2,708,710 - MPMX20_02570 0.55 -0.3
2,708,710 - MPMX20_02570 0.55 -2.2
2,708,710 - MPMX20_02570 0.55 +1.8
2,708,723 + MPMX20_02570 0.58 +0.7
2,708,724 + MPMX20_02570 0.59 -1.8
2,708,783 + MPMX20_02570 0.72 +1.5
2,708,788 + MPMX20_02570 0.73 +0.5
2,708,796 - MPMX20_02570 0.75 -2.5
2,708,836 + MPMX20_02570 0.84 -3.3
2,708,846 + MPMX20_02570 0.87 -0.8
2,708,897 + +0.3
2,708,925 + +0.0
2,708,962 + -2.5
2,708,962 + -2.6
2,708,962 + -2.1
2,708,967 + -3.0
2,708,968 - +3.0
2,708,970 - +0.6
2,708,975 - +0.3
2,708,976 - -3.5
2,709,003 + -2.4
2,709,003 + -2.5
2,709,061 + -1.8
2,709,071 + +1.1
2,709,077 + +1.9
2,709,079 - -3.2
2,709,082 + -3.2
2,709,082 + -0.3
2,709,090 - +2.6
2,709,146 - -1.3
2,709,153 + +1.7
2,709,156 - +1.2
2,709,165 + +1.3
2,709,189 - +3.4
2,709,197 + -0.5
2,709,197 + +1.1
2,709,197 + +1.0
2,709,197 + -1.1
2,709,197 + -2.0
2,709,197 + +1.1
2,709,197 + -1.8
2,709,205 - -1.0
2,709,205 - +0.0
2,709,207 + -2.8
2,709,208 + -2.5
2,709,213 + +0.8
2,709,213 + +2.2
2,709,215 - +2.7
2,709,216 - +1.0
2,709,216 - +1.4
2,709,221 - +0.9
2,709,221 - +1.9
2,709,222 + -1.3
2,709,223 + -3.2
2,709,230 - -2.8
2,709,230 - -1.8
2,709,231 - -3.3

Or see this region's nucleotide sequence