Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02450

Experiment: octanoate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02449 and MPMX20_02450 are separated by 185 nucleotidesMPMX20_02450 and MPMX20_02451 overlap by 10 nucleotides MPMX20_02449: MPMX20_02449 - Periplasmic murein peptide-binding protein, at 2,587,356 to 2,588,972 _02449 MPMX20_02450: MPMX20_02450 - Murein peptide amidase A, at 2,589,158 to 2,589,871 _02450 MPMX20_02451: MPMX20_02451 - L-Ala-D/L-Glu epimerase, at 2,589,862 to 2,590,827 _02451 Position (kb) 2589 2590Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2588.177 kb on - strand, within MPMX20_02449at 2588.260 kb on + strand, within MPMX20_02449at 2588.260 kb on + strand, within MPMX20_02449at 2588.260 kb on + strand, within MPMX20_02449at 2588.268 kb on - strand, within MPMX20_02449at 2588.268 kb on - strand, within MPMX20_02449at 2588.268 kb on - strand, within MPMX20_02449at 2588.272 kb on + strand, within MPMX20_02449at 2588.272 kb on + strand, within MPMX20_02449at 2588.284 kb on + strand, within MPMX20_02449at 2588.292 kb on - strand, within MPMX20_02449at 2588.366 kb on - strand, within MPMX20_02449at 2588.367 kb on + strand, within MPMX20_02449at 2588.383 kb on - strand, within MPMX20_02449at 2588.452 kb on + strand, within MPMX20_02449at 2588.460 kb on - strand, within MPMX20_02449at 2588.518 kb on + strand, within MPMX20_02449at 2588.680 kb on - strand, within MPMX20_02449at 2588.686 kb on + strand, within MPMX20_02449at 2588.767 kb on + strand, within MPMX20_02449at 2588.782 kb on + strand, within MPMX20_02449at 2588.842 kb on + strandat 2588.842 kb on + strandat 2588.842 kb on + strandat 2588.850 kb on - strandat 2588.850 kb on - strandat 2588.859 kb on - strandat 2588.887 kb on - strandat 2588.889 kb on - strandat 2588.889 kb on - strandat 2588.905 kb on + strandat 2588.905 kb on + strandat 2588.913 kb on - strandat 2588.915 kb on - strandat 2588.926 kb on + strandat 2588.931 kb on + strandat 2588.939 kb on + strandat 2588.939 kb on + strandat 2588.939 kb on + strandat 2588.939 kb on + strandat 2588.944 kb on + strandat 2588.944 kb on + strandat 2588.944 kb on + strandat 2588.944 kb on + strandat 2588.944 kb on + strandat 2588.944 kb on + strandat 2588.944 kb on + strandat 2588.947 kb on - strandat 2589.120 kb on - strandat 2589.175 kb on - strandat 2589.187 kb on - strandat 2589.189 kb on + strandat 2589.204 kb on + strandat 2589.204 kb on + strandat 2589.204 kb on + strandat 2589.204 kb on + strandat 2589.204 kb on + strandat 2589.212 kb on + strandat 2589.212 kb on - strandat 2589.212 kb on - strandat 2589.212 kb on - strandat 2589.212 kb on - strandat 2589.222 kb on - strandat 2589.318 kb on + strand, within MPMX20_02450at 2589.342 kb on - strand, within MPMX20_02450at 2589.351 kb on + strand, within MPMX20_02450at 2589.351 kb on + strand, within MPMX20_02450at 2589.371 kb on - strand, within MPMX20_02450at 2589.405 kb on + strand, within MPMX20_02450at 2589.431 kb on - strand, within MPMX20_02450at 2589.520 kb on - strand, within MPMX20_02450at 2589.578 kb on - strand, within MPMX20_02450at 2589.660 kb on + strand, within MPMX20_02450at 2589.713 kb on + strand, within MPMX20_02450at 2589.729 kb on + strand, within MPMX20_02450at 2589.729 kb on + strand, within MPMX20_02450at 2589.737 kb on - strand, within MPMX20_02450at 2589.801 kb on + strandat 2589.814 kb on - strandat 2589.846 kb on - strandat 2589.905 kb on - strandat 2589.989 kb on + strand, within MPMX20_02451at 2589.997 kb on + strand, within MPMX20_02451at 2589.997 kb on - strand, within MPMX20_02451at 2589.997 kb on - strand, within MPMX20_02451at 2589.997 kb on - strand, within MPMX20_02451at 2589.999 kb on + strand, within MPMX20_02451at 2589.999 kb on + strand, within MPMX20_02451at 2589.999 kb on + strand, within MPMX20_02451at 2589.999 kb on + strand, within MPMX20_02451at 2589.999 kb on + strand, within MPMX20_02451at 2589.999 kb on + strand, within MPMX20_02451at 2589.999 kb on + strand, within MPMX20_02451at 2590.007 kb on - strand, within MPMX20_02451at 2590.007 kb on - strand, within MPMX20_02451at 2590.007 kb on - strand, within MPMX20_02451at 2590.024 kb on + strand, within MPMX20_02451at 2590.032 kb on - strand, within MPMX20_02451at 2590.123 kb on + strand, within MPMX20_02451at 2590.140 kb on + strand, within MPMX20_02451at 2590.140 kb on + strand, within MPMX20_02451at 2590.162 kb on + strand, within MPMX20_02451at 2590.196 kb on + strand, within MPMX20_02451at 2590.204 kb on - strand, within MPMX20_02451at 2590.251 kb on + strand, within MPMX20_02451at 2590.267 kb on + strand, within MPMX20_02451at 2590.273 kb on + strand, within MPMX20_02451at 2590.280 kb on - strand, within MPMX20_02451at 2590.326 kb on - strand, within MPMX20_02451at 2590.328 kb on + strand, within MPMX20_02451at 2590.357 kb on + strand, within MPMX20_02451at 2590.432 kb on + strand, within MPMX20_02451at 2590.434 kb on + strand, within MPMX20_02451at 2590.440 kb on - strand, within MPMX20_02451at 2590.545 kb on - strand, within MPMX20_02451at 2590.545 kb on - strand, within MPMX20_02451at 2590.545 kb on - strand, within MPMX20_02451at 2590.580 kb on + strand, within MPMX20_02451at 2590.598 kb on - strand, within MPMX20_02451at 2590.714 kb on - strand, within MPMX20_02451at 2590.715 kb on - strand, within MPMX20_02451at 2590.743 kb on + strandat 2590.812 kb on + strandat 2590.812 kb on + strandat 2590.812 kb on + strandat 2590.812 kb on + strandat 2590.812 kb on + strandat 2590.812 kb on + strandat 2590.820 kb on - strandat 2590.836 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
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2,588,177 - MPMX20_02449 0.51 -3.4
2,588,260 + MPMX20_02449 0.56 +1.2
2,588,260 + MPMX20_02449 0.56 -0.2
2,588,260 + MPMX20_02449 0.56 -1.7
2,588,268 - MPMX20_02449 0.56 -2.8
2,588,268 - MPMX20_02449 0.56 +0.9
2,588,268 - MPMX20_02449 0.56 -3.4
2,588,272 + MPMX20_02449 0.57 -0.9
2,588,272 + MPMX20_02449 0.57 -1.1
2,588,284 + MPMX20_02449 0.57 +2.2
2,588,292 - MPMX20_02449 0.58 +2.1
2,588,366 - MPMX20_02449 0.62 -0.5
2,588,367 + MPMX20_02449 0.63 +1.5
2,588,383 - MPMX20_02449 0.64 -1.4
2,588,452 + MPMX20_02449 0.68 +3.1
2,588,460 - MPMX20_02449 0.68 -3.1
2,588,518 + MPMX20_02449 0.72 +2.2
2,588,680 - MPMX20_02449 0.82 +0.8
2,588,686 + MPMX20_02449 0.82 -0.6
2,588,767 + MPMX20_02449 0.87 -1.1
2,588,782 + MPMX20_02449 0.88 -0.7
2,588,842 + +0.6
2,588,842 + +0.5
2,588,842 + -1.8
2,588,850 - +0.5
2,588,850 - -3.1
2,588,859 - -3.5
2,588,887 - +3.0
2,588,889 - +0.1
2,588,889 - +0.1
2,588,905 + -0.7
2,588,905 + +3.2
2,588,913 - +1.3
2,588,915 - +2.0
2,588,926 + +1.1
2,588,931 + +0.1
2,588,939 + -0.9
2,588,939 + -2.7
2,588,939 + -3.1
2,588,939 + -2.3
2,588,944 + -2.9
2,588,944 + -2.9
2,588,944 + +3.1
2,588,944 + -2.2
2,588,944 + +0.2
2,588,944 + -0.9
2,588,944 + -1.4
2,588,947 - -0.6
2,589,120 - -0.7
2,589,175 - -1.7
2,589,187 - -2.4
2,589,189 + -2.4
2,589,204 + -2.6
2,589,204 + +1.0
2,589,204 + -2.3
2,589,204 + -2.6
2,589,204 + +0.1
2,589,212 + -1.2
2,589,212 - +3.0
2,589,212 - -1.5
2,589,212 - +1.8
2,589,212 - +0.5
2,589,222 - +1.1
2,589,318 + MPMX20_02450 0.22 -0.2
2,589,342 - MPMX20_02450 0.26 +1.8
2,589,351 + MPMX20_02450 0.27 -2.5
2,589,351 + MPMX20_02450 0.27 +1.9
2,589,371 - MPMX20_02450 0.30 +2.4
2,589,405 + MPMX20_02450 0.35 -2.5
2,589,431 - MPMX20_02450 0.38 -3.2
2,589,520 - MPMX20_02450 0.51 +2.4
2,589,578 - MPMX20_02450 0.59 -1.6
2,589,660 + MPMX20_02450 0.70 -1.4
2,589,713 + MPMX20_02450 0.78 -2.2
2,589,729 + MPMX20_02450 0.80 +2.8
2,589,729 + MPMX20_02450 0.80 +2.0
2,589,737 - MPMX20_02450 0.81 -1.2
2,589,801 + +1.8
2,589,814 - +2.1
2,589,846 - +1.9
2,589,905 - -1.4
2,589,989 + MPMX20_02451 0.13 -2.9
2,589,997 + MPMX20_02451 0.14 +0.8
2,589,997 - MPMX20_02451 0.14 +1.5
2,589,997 - MPMX20_02451 0.14 -1.2
2,589,997 - MPMX20_02451 0.14 +1.2
2,589,999 + MPMX20_02451 0.14 -1.9
2,589,999 + MPMX20_02451 0.14 +1.5
2,589,999 + MPMX20_02451 0.14 +0.3
2,589,999 + MPMX20_02451 0.14 -0.2
2,589,999 + MPMX20_02451 0.14 +2.9
2,589,999 + MPMX20_02451 0.14 -2.5
2,589,999 + MPMX20_02451 0.14 -1.8
2,590,007 - MPMX20_02451 0.15 +2.6
2,590,007 - MPMX20_02451 0.15 -1.2
2,590,007 - MPMX20_02451 0.15 -2.0
2,590,024 + MPMX20_02451 0.17 -0.5
2,590,032 - MPMX20_02451 0.18 +0.5
2,590,123 + MPMX20_02451 0.27 +0.1
2,590,140 + MPMX20_02451 0.29 -2.0
2,590,140 + MPMX20_02451 0.29 -1.9
2,590,162 + MPMX20_02451 0.31 +2.3
2,590,196 + MPMX20_02451 0.35 +0.1
2,590,204 - MPMX20_02451 0.35 -2.4
2,590,251 + MPMX20_02451 0.40 -1.7
2,590,267 + MPMX20_02451 0.42 +1.7
2,590,273 + MPMX20_02451 0.43 -1.2
2,590,280 - MPMX20_02451 0.43 -3.1
2,590,326 - MPMX20_02451 0.48 +1.7
2,590,328 + MPMX20_02451 0.48 +1.6
2,590,357 + MPMX20_02451 0.51 -1.1
2,590,432 + MPMX20_02451 0.59 +1.1
2,590,434 + MPMX20_02451 0.59 -1.9
2,590,440 - MPMX20_02451 0.60 +1.5
2,590,545 - MPMX20_02451 0.71 -2.2
2,590,545 - MPMX20_02451 0.71 +2.0
2,590,545 - MPMX20_02451 0.71 -2.1
2,590,580 + MPMX20_02451 0.74 -3.0
2,590,598 - MPMX20_02451 0.76 -1.5
2,590,714 - MPMX20_02451 0.88 -0.6
2,590,715 - MPMX20_02451 0.88 -3.3
2,590,743 + +1.6
2,590,812 + -0.7
2,590,812 + -2.2
2,590,812 + +0.8
2,590,812 + -2.6
2,590,812 + -2.5
2,590,812 + -1.9
2,590,820 - -1.7
2,590,836 + +1.1

Or see this region's nucleotide sequence