Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02402 and MPMX20_02403 overlap by 22 nucleotides MPMX20_02403 and MPMX20_02404 are separated by 110 nucleotides MPMX20_02404 and MPMX20_02405 are separated by 322 nucleotides
MPMX20_02402: MPMX20_02402 - N-acetylcysteine deacetylase, at 2,533,620 to 2,534,741
_02402
MPMX20_02403: MPMX20_02403 - hypothetical protein, at 2,534,720 to 2,535,739
_02403
MPMX20_02404: MPMX20_02404 - hypothetical protein, at 2,535,850 to 2,536,389
_02404
MPMX20_02405: MPMX20_02405 - Aerotaxis receptor, at 2,536,712 to 2,538,265
_02405
Position (kb)
2534
2535
2536 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 2533.732 kb on - strand at 2533.732 kb on - strand at 2533.761 kb on - strand, within MPMX20_02402 at 2533.766 kb on + strand, within MPMX20_02402 at 2533.792 kb on + strand, within MPMX20_02402 at 2533.792 kb on + strand, within MPMX20_02402 at 2533.792 kb on + strand, within MPMX20_02402 at 2533.792 kb on + strand, within MPMX20_02402 at 2533.800 kb on - strand, within MPMX20_02402 at 2533.800 kb on - strand, within MPMX20_02402 at 2533.870 kb on + strand, within MPMX20_02402 at 2533.870 kb on + strand, within MPMX20_02402 at 2533.870 kb on + strand, within MPMX20_02402 at 2533.870 kb on + strand, within MPMX20_02402 at 2533.870 kb on + strand, within MPMX20_02402 at 2533.878 kb on - strand, within MPMX20_02402 at 2533.896 kb on - strand, within MPMX20_02402 at 2533.932 kb on + strand, within MPMX20_02402 at 2533.982 kb on - strand, within MPMX20_02402 at 2533.982 kb on - strand, within MPMX20_02402 at 2534.038 kb on + strand, within MPMX20_02402 at 2534.078 kb on - strand, within MPMX20_02402 at 2534.109 kb on + strand, within MPMX20_02402 at 2534.126 kb on - strand, within MPMX20_02402 at 2534.243 kb on - strand, within MPMX20_02402 at 2534.321 kb on - strand, within MPMX20_02402 at 2534.334 kb on - strand, within MPMX20_02402 at 2534.347 kb on + strand, within MPMX20_02402 at 2534.414 kb on + strand, within MPMX20_02402 at 2534.414 kb on + strand, within MPMX20_02402 at 2534.414 kb on + strand, within MPMX20_02402 at 2534.414 kb on + strand, within MPMX20_02402 at 2534.422 kb on - strand, within MPMX20_02402 at 2534.422 kb on - strand, within MPMX20_02402 at 2534.422 kb on - strand, within MPMX20_02402 at 2534.426 kb on + strand, within MPMX20_02402 at 2534.448 kb on + strand, within MPMX20_02402 at 2534.477 kb on - strand, within MPMX20_02402 at 2534.480 kb on + strand, within MPMX20_02402 at 2534.502 kb on - strand, within MPMX20_02402 at 2534.509 kb on + strand, within MPMX20_02402 at 2534.595 kb on + strand, within MPMX20_02402 at 2534.595 kb on + strand, within MPMX20_02402 at 2534.595 kb on + strand, within MPMX20_02402 at 2534.603 kb on - strand, within MPMX20_02402 at 2534.603 kb on - strand, within MPMX20_02402 at 2534.603 kb on - strand, within MPMX20_02402 at 2534.605 kb on + strand, within MPMX20_02402 at 2534.626 kb on - strand, within MPMX20_02402 at 2534.626 kb on - strand, within MPMX20_02402 at 2534.640 kb on - strand at 2534.651 kb on + strand at 2534.692 kb on - strand at 2534.692 kb on - strand at 2534.692 kb on - strand at 2534.692 kb on - strand at 2534.760 kb on + strand at 2534.760 kb on + strand at 2534.870 kb on - strand, within MPMX20_02403 at 2534.870 kb on - strand, within MPMX20_02403 at 2534.870 kb on - strand, within MPMX20_02403 at 2534.870 kb on - strand, within MPMX20_02403 at 2534.884 kb on + strand, within MPMX20_02403 at 2534.916 kb on - strand, within MPMX20_02403 at 2534.961 kb on + strand, within MPMX20_02403 at 2534.979 kb on - strand, within MPMX20_02403 at 2534.979 kb on - strand, within MPMX20_02403 at 2534.984 kb on - strand, within MPMX20_02403 at 2534.989 kb on - strand, within MPMX20_02403 at 2535.051 kb on + strand, within MPMX20_02403 at 2535.065 kb on - strand, within MPMX20_02403 at 2535.072 kb on + strand, within MPMX20_02403 at 2535.077 kb on + strand, within MPMX20_02403 at 2535.133 kb on - strand, within MPMX20_02403 at 2535.148 kb on + strand, within MPMX20_02403 at 2535.156 kb on + strand, within MPMX20_02403 at 2535.445 kb on - strand, within MPMX20_02403 at 2535.499 kb on - strand, within MPMX20_02403 at 2535.576 kb on + strand, within MPMX20_02403 at 2535.584 kb on - strand, within MPMX20_02403 at 2535.594 kb on + strand, within MPMX20_02403 at 2535.602 kb on - strand, within MPMX20_02403 at 2535.655 kb on + strand at 2535.655 kb on + strand at 2535.655 kb on + strand at 2535.657 kb on - strand at 2535.661 kb on + strand at 2535.663 kb on - strand at 2535.663 kb on - strand at 2535.663 kb on - strand at 2535.673 kb on + strand at 2535.673 kb on + strand at 2535.707 kb on + strand at 2535.720 kb on + strand at 2535.729 kb on + strand at 2535.750 kb on + strand at 2535.750 kb on + strand at 2535.764 kb on - strand at 2535.791 kb on + strand at 2535.792 kb on - strand at 2535.862 kb on - strand at 2535.881 kb on - strand at 2535.896 kb on - strand at 2535.941 kb on + strand, within MPMX20_02404 at 2535.944 kb on - strand, within MPMX20_02404 at 2535.949 kb on - strand, within MPMX20_02404 at 2535.949 kb on - strand, within MPMX20_02404 at 2535.952 kb on + strand, within MPMX20_02404 at 2535.960 kb on - strand, within MPMX20_02404 at 2535.979 kb on + strand, within MPMX20_02404 at 2535.987 kb on - strand, within MPMX20_02404 at 2535.997 kb on - strand, within MPMX20_02404 at 2536.012 kb on + strand, within MPMX20_02404 at 2536.012 kb on + strand, within MPMX20_02404 at 2536.020 kb on - strand, within MPMX20_02404 at 2536.020 kb on - strand, within MPMX20_02404 at 2536.020 kb on - strand, within MPMX20_02404 at 2536.020 kb on - strand, within MPMX20_02404 at 2536.020 kb on - strand, within MPMX20_02404 at 2536.070 kb on - strand, within MPMX20_02404 at 2536.081 kb on - strand, within MPMX20_02404 at 2536.081 kb on - strand, within MPMX20_02404 at 2536.089 kb on + strand, within MPMX20_02404 at 2536.103 kb on + strand, within MPMX20_02404 at 2536.103 kb on + strand, within MPMX20_02404 at 2536.111 kb on - strand, within MPMX20_02404 at 2536.111 kb on - strand, within MPMX20_02404 at 2536.113 kb on + strand, within MPMX20_02404 at 2536.113 kb on + strand, within MPMX20_02404 at 2536.115 kb on - strand, within MPMX20_02404 at 2536.126 kb on + strand, within MPMX20_02404 at 2536.128 kb on - strand, within MPMX20_02404 at 2536.134 kb on - strand, within MPMX20_02404 at 2536.155 kb on + strand, within MPMX20_02404 at 2536.158 kb on - strand, within MPMX20_02404 at 2536.162 kb on + strand, within MPMX20_02404 at 2536.189 kb on - strand, within MPMX20_02404 at 2536.217 kb on - strand, within MPMX20_02404 at 2536.218 kb on + strand, within MPMX20_02404 at 2536.218 kb on + strand, within MPMX20_02404 at 2536.226 kb on - strand, within MPMX20_02404 at 2536.254 kb on + strand, within MPMX20_02404 at 2536.254 kb on + strand, within MPMX20_02404 at 2536.254 kb on + strand, within MPMX20_02404 at 2536.259 kb on + strand, within MPMX20_02404 at 2536.262 kb on - strand, within MPMX20_02404 at 2536.262 kb on - strand, within MPMX20_02404 at 2536.267 kb on - strand, within MPMX20_02404 at 2536.273 kb on + strand, within MPMX20_02404 at 2536.282 kb on + strand, within MPMX20_02404 at 2536.310 kb on + strand, within MPMX20_02404 at 2536.310 kb on + strand, within MPMX20_02404 at 2536.320 kb on + strand, within MPMX20_02404 at 2536.320 kb on + strand, within MPMX20_02404 at 2536.323 kb on - strand, within MPMX20_02404 at 2536.323 kb on - strand, within MPMX20_02404 at 2536.323 kb on - strand, within MPMX20_02404 at 2536.328 kb on + strand, within MPMX20_02404 at 2536.328 kb on + strand, within MPMX20_02404 at 2536.328 kb on + strand, within MPMX20_02404 at 2536.328 kb on - strand, within MPMX20_02404 at 2536.328 kb on - strand, within MPMX20_02404 at 2536.334 kb on + strand, within MPMX20_02404 at 2536.336 kb on - strand at 2536.338 kb on + strand at 2536.338 kb on + strand at 2536.342 kb on - strand at 2536.346 kb on - strand at 2536.362 kb on + strand at 2536.362 kb on + strand at 2536.377 kb on + strand at 2536.377 kb on + strand at 2536.382 kb on + strand at 2536.382 kb on + strand at 2536.383 kb on + strand at 2536.383 kb on + strand at 2536.383 kb on + strand at 2536.383 kb on + strand at 2536.383 kb on + strand at 2536.383 kb on + strand at 2536.383 kb on + strand at 2536.383 kb on + strand at 2536.383 kb on + strand at 2536.383 kb on + strand at 2536.383 kb on + strand at 2536.383 kb on + strand at 2536.383 kb on + strand at 2536.383 kb on + strand at 2536.383 kb on + strand at 2536.383 kb on + strand at 2536.383 kb on + strand at 2536.383 kb on + strand at 2536.383 kb on + strand at 2536.383 kb on + strand at 2536.383 kb on + strand at 2536.383 kb on + strand at 2536.383 kb on + strand at 2536.383 kb on + strand at 2536.383 kb on + strand at 2536.383 kb on + strand at 2536.383 kb on + strand at 2536.383 kb on + strand at 2536.383 kb on + strand at 2536.383 kb on + strand at 2536.383 kb on + strand at 2536.383 kb on + strand at 2536.383 kb on + strand at 2536.383 kb on + strand at 2536.383 kb on + strand at 2536.383 kb on + strand at 2536.383 kb on + strand at 2536.391 kb on + strand at 2536.391 kb on + strand at 2536.391 kb on - strand at 2536.391 kb on - strand at 2536.393 kb on + strand at 2536.393 kb on + strand at 2536.393 kb on + strand at 2536.393 kb on + strand at 2536.393 kb on + strand at 2536.393 kb on + strand at 2536.393 kb on + strand at 2536.393 kb on + strand at 2536.396 kb on + strand at 2536.401 kb on - strand at 2536.409 kb on + strand at 2536.415 kb on + strand at 2536.415 kb on + strand at 2536.415 kb on + strand at 2536.415 kb on + strand at 2536.415 kb on + strand at 2536.415 kb on + strand at 2536.416 kb on + strand at 2536.416 kb on + strand at 2536.416 kb on + strand at 2536.430 kb on + strand at 2536.430 kb on + strand at 2536.430 kb on + strand at 2536.430 kb on + strand at 2536.459 kb on + strand at 2536.464 kb on + strand at 2536.464 kb on + strand at 2536.464 kb on + strand at 2536.469 kb on + strand at 2536.475 kb on + strand at 2536.481 kb on + strand at 2536.481 kb on + strand at 2536.483 kb on + strand at 2536.483 kb on + strand at 2536.483 kb on + strand at 2536.483 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 2,533,732 - -0.2 2,533,732 - +2.7 2,533,761 - MPMX20_02402 0.13 -2.4 2,533,766 + MPMX20_02402 0.13 -2.2 2,533,792 + MPMX20_02402 0.15 -2.8 2,533,792 + MPMX20_02402 0.15 -3.7 2,533,792 + MPMX20_02402 0.15 -3.4 2,533,792 + MPMX20_02402 0.15 -1.5 2,533,800 - MPMX20_02402 0.16 +1.2 2,533,800 - MPMX20_02402 0.16 -1.9 2,533,870 + MPMX20_02402 0.22 +1.8 2,533,870 + MPMX20_02402 0.22 +1.8 2,533,870 + MPMX20_02402 0.22 +0.7 2,533,870 + MPMX20_02402 0.22 +0.5 2,533,870 + MPMX20_02402 0.22 -1.8 2,533,878 - MPMX20_02402 0.23 +1.8 2,533,896 - MPMX20_02402 0.25 -1.9 2,533,932 + MPMX20_02402 0.28 -1.6 2,533,982 - MPMX20_02402 0.32 -3.2 2,533,982 - MPMX20_02402 0.32 +1.1 2,534,038 + MPMX20_02402 0.37 -0.6 2,534,078 - MPMX20_02402 0.41 +0.1 2,534,109 + MPMX20_02402 0.44 +1.6 2,534,126 - MPMX20_02402 0.45 +1.1 2,534,243 - MPMX20_02402 0.56 -2.5 2,534,321 - MPMX20_02402 0.62 -0.2 2,534,334 - MPMX20_02402 0.64 -2.1 2,534,347 + MPMX20_02402 0.65 +1.3 2,534,414 + MPMX20_02402 0.71 -3.0 2,534,414 + MPMX20_02402 0.71 +1.2 2,534,414 + MPMX20_02402 0.71 +1.4 2,534,414 + MPMX20_02402 0.71 -2.8 2,534,422 - MPMX20_02402 0.71 -2.7 2,534,422 - MPMX20_02402 0.71 -3.2 2,534,422 - MPMX20_02402 0.71 -0.9 2,534,426 + MPMX20_02402 0.72 +2.7 2,534,448 + MPMX20_02402 0.74 -0.0 2,534,477 - MPMX20_02402 0.76 +0.1 2,534,480 + MPMX20_02402 0.77 -0.2 2,534,502 - MPMX20_02402 0.79 -1.9 2,534,509 + MPMX20_02402 0.79 +2.5 2,534,595 + MPMX20_02402 0.87 -0.5 2,534,595 + MPMX20_02402 0.87 -1.7 2,534,595 + MPMX20_02402 0.87 -0.7 2,534,603 - MPMX20_02402 0.88 +0.2 2,534,603 - MPMX20_02402 0.88 -2.0 2,534,603 - MPMX20_02402 0.88 +1.4 2,534,605 + MPMX20_02402 0.88 -0.2 2,534,626 - MPMX20_02402 0.90 +1.6 2,534,626 - MPMX20_02402 0.90 +1.8 2,534,640 - -0.9 2,534,651 + +2.0 2,534,692 - -0.5 2,534,692 - -1.6 2,534,692 - -0.9 2,534,692 - -2.7 2,534,760 + -0.2 2,534,760 + -2.4 2,534,870 - MPMX20_02403 0.15 -1.7 2,534,870 - MPMX20_02403 0.15 +1.2 2,534,870 - MPMX20_02403 0.15 +0.4 2,534,870 - MPMX20_02403 0.15 +0.8 2,534,884 + MPMX20_02403 0.16 -2.4 2,534,916 - MPMX20_02403 0.19 +3.4 2,534,961 + MPMX20_02403 0.24 +3.5 2,534,979 - MPMX20_02403 0.25 +0.9 2,534,979 - MPMX20_02403 0.25 -1.5 2,534,984 - MPMX20_02403 0.26 +1.0 2,534,989 - MPMX20_02403 0.26 +1.8 2,535,051 + MPMX20_02403 0.32 -2.6 2,535,065 - MPMX20_02403 0.34 -3.7 2,535,072 + MPMX20_02403 0.35 -2.4 2,535,077 + MPMX20_02403 0.35 -1.7 2,535,133 - MPMX20_02403 0.40 +1.2 2,535,148 + MPMX20_02403 0.42 +1.0 2,535,156 + MPMX20_02403 0.43 -3.9 2,535,445 - MPMX20_02403 0.71 -0.2 2,535,499 - MPMX20_02403 0.76 +0.6 2,535,576 + MPMX20_02403 0.84 +3.2 2,535,584 - MPMX20_02403 0.85 +3.0 2,535,594 + MPMX20_02403 0.86 -2.9 2,535,602 - MPMX20_02403 0.86 +1.7 2,535,655 + -2.6 2,535,655 + +1.0 2,535,655 + -2.2 2,535,657 - -2.4 2,535,661 + +1.3 2,535,663 - -3.1 2,535,663 - -3.0 2,535,663 - -1.4 2,535,673 + -1.5 2,535,673 + +0.2 2,535,707 + +0.8 2,535,720 + +2.3 2,535,729 + -0.5 2,535,750 + -1.9 2,535,750 + -1.8 2,535,764 - +0.8 2,535,791 + -0.9 2,535,792 - +0.4 2,535,862 - -0.7 2,535,881 - +1.3 2,535,896 - +0.1 2,535,941 + MPMX20_02404 0.17 -2.6 2,535,944 - MPMX20_02404 0.17 +1.2 2,535,949 - MPMX20_02404 0.18 +0.9 2,535,949 - MPMX20_02404 0.18 -0.7 2,535,952 + MPMX20_02404 0.19 +1.7 2,535,960 - MPMX20_02404 0.20 -2.4 2,535,979 + MPMX20_02404 0.24 -3.7 2,535,987 - MPMX20_02404 0.25 -3.2 2,535,997 - MPMX20_02404 0.27 -2.7 2,536,012 + MPMX20_02404 0.30 +0.7 2,536,012 + MPMX20_02404 0.30 -0.5 2,536,020 - MPMX20_02404 0.31 -2.6 2,536,020 - MPMX20_02404 0.31 -2.9 2,536,020 - MPMX20_02404 0.31 +1.5 2,536,020 - MPMX20_02404 0.31 +0.1 2,536,020 - MPMX20_02404 0.31 -3.3 2,536,070 - MPMX20_02404 0.41 -0.8 2,536,081 - MPMX20_02404 0.43 -2.8 2,536,081 - MPMX20_02404 0.43 +2.1 2,536,089 + MPMX20_02404 0.44 -0.5 2,536,103 + MPMX20_02404 0.47 -0.7 2,536,103 + MPMX20_02404 0.47 -0.7 2,536,111 - MPMX20_02404 0.48 -0.5 2,536,111 - MPMX20_02404 0.48 -1.6 2,536,113 + MPMX20_02404 0.49 -3.3 2,536,113 + MPMX20_02404 0.49 +0.4 2,536,115 - MPMX20_02404 0.49 +1.5 2,536,126 + MPMX20_02404 0.51 -0.3 2,536,128 - MPMX20_02404 0.51 +3.8 2,536,134 - MPMX20_02404 0.53 -0.7 2,536,155 + MPMX20_02404 0.56 +1.8 2,536,158 - MPMX20_02404 0.57 +2.3 2,536,162 + MPMX20_02404 0.58 +1.3 2,536,189 - MPMX20_02404 0.63 +0.7 2,536,217 - MPMX20_02404 0.68 -2.4 2,536,218 + MPMX20_02404 0.68 +1.4 2,536,218 + MPMX20_02404 0.68 +1.1 2,536,226 - MPMX20_02404 0.70 +3.3 2,536,254 + MPMX20_02404 0.75 -2.2 2,536,254 + MPMX20_02404 0.75 +0.5 2,536,254 + MPMX20_02404 0.75 +1.4 2,536,259 + MPMX20_02404 0.76 -1.5 2,536,262 - MPMX20_02404 0.76 -2.2 2,536,262 - MPMX20_02404 0.76 +0.5 2,536,267 - MPMX20_02404 0.77 -1.4 2,536,273 + MPMX20_02404 0.78 -1.5 2,536,282 + MPMX20_02404 0.80 -2.8 2,536,310 + MPMX20_02404 0.85 +1.3 2,536,310 + MPMX20_02404 0.85 -1.7 2,536,320 + MPMX20_02404 0.87 +1.4 2,536,320 + MPMX20_02404 0.87 -0.2 2,536,323 - MPMX20_02404 0.88 +3.4 2,536,323 - MPMX20_02404 0.88 +0.6 2,536,323 - MPMX20_02404 0.88 -2.2 2,536,328 + MPMX20_02404 0.89 -0.2 2,536,328 + MPMX20_02404 0.89 -0.4 2,536,328 + MPMX20_02404 0.89 -2.4 2,536,328 - MPMX20_02404 0.89 +2.1 2,536,328 - MPMX20_02404 0.89 +1.7 2,536,334 + MPMX20_02404 0.90 -2.6 2,536,336 - -1.5 2,536,338 + -2.6 2,536,338 + -2.0 2,536,342 - -1.7 2,536,346 - -1.4 2,536,362 + +1.7 2,536,362 + -2.0 2,536,377 + +1.9 2,536,377 + -2.2 2,536,382 + +2.2 2,536,382 + -1.5 2,536,383 + -1.9 2,536,383 + -0.9 2,536,383 + +1.3 2,536,383 + +0.5 2,536,383 + +0.9 2,536,383 + -1.5 2,536,383 + +1.1 2,536,383 + -3.5 2,536,383 + -1.1 2,536,383 + +0.1 2,536,383 + -1.8 2,536,383 + +1.1 2,536,383 + -3.5 2,536,383 + -2.2 2,536,383 + -2.6 2,536,383 + +0.4 2,536,383 + -0.2 2,536,383 + -0.7 2,536,383 + +1.2 2,536,383 + +0.8 2,536,383 + +0.5 2,536,383 + -0.2 2,536,383 + +1.7 2,536,383 + +3.0 2,536,383 + -1.8 2,536,383 + -0.2 2,536,383 + +1.9 2,536,383 + -2.1 2,536,383 + +1.0 2,536,383 + -2.3 2,536,383 + +2.1 2,536,383 + +0.6 2,536,383 + -2.1 2,536,383 + -1.2 2,536,383 + +1.1 2,536,383 + -2.4 2,536,383 + -1.4 2,536,391 + +1.1 2,536,391 + +1.2 2,536,391 - +4.0 2,536,391 - +1.1 2,536,393 + -2.0 2,536,393 + -1.1 2,536,393 + -2.2 2,536,393 + -2.3 2,536,393 + +1.9 2,536,393 + -0.2 2,536,393 + +0.5 2,536,393 + -1.7 2,536,396 + -2.7 2,536,401 - +0.5 2,536,409 + -2.5 2,536,415 + +1.7 2,536,415 + +3.2 2,536,415 + +1.1 2,536,415 + +0.4 2,536,415 + +1.5 2,536,415 + +4.2 2,536,416 + -2.0 2,536,416 + -0.2 2,536,416 + +3.8 2,536,430 + -1.2 2,536,430 + +0.6 2,536,430 + +0.1 2,536,430 + -2.2 2,536,459 + +1.8 2,536,464 + -0.9 2,536,464 + -0.7 2,536,464 + -1.7 2,536,469 + +2.0 2,536,475 + +3.2 2,536,481 + -1.2 2,536,481 + +0.1 2,536,483 + -2.9 2,536,483 + +0.6 2,536,483 + -2.5 2,536,483 + +0.2
Or see this region's nucleotide sequence