Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02382

Experiment: octanoate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02381 and MPMX20_02382 are separated by 79 nucleotidesMPMX20_02382 and MPMX20_02383 are separated by 38 nucleotides MPMX20_02381: MPMX20_02381 - Outer membrane porin protein OmpD, at 2,510,912 to 2,511,985 _02381 MPMX20_02382: MPMX20_02382 - hypothetical protein, at 2,512,065 to 2,512,523 _02382 MPMX20_02383: MPMX20_02383 - Methyl viologen resistance protein SmvA, at 2,512,562 to 2,514,049 _02383 Position (kb) 2512 2513Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 2511.076 kb on - strand, within MPMX20_02381at 2511.129 kb on - strand, within MPMX20_02381at 2511.136 kb on - strand, within MPMX20_02381at 2511.173 kb on + strand, within MPMX20_02381at 2511.288 kb on + strand, within MPMX20_02381at 2511.319 kb on + strand, within MPMX20_02381at 2511.321 kb on + strand, within MPMX20_02381at 2511.327 kb on - strand, within MPMX20_02381at 2511.340 kb on + strand, within MPMX20_02381at 2511.415 kb on - strand, within MPMX20_02381at 2511.420 kb on - strand, within MPMX20_02381at 2511.422 kb on + strand, within MPMX20_02381at 2511.430 kb on - strand, within MPMX20_02381at 2511.435 kb on - strand, within MPMX20_02381at 2511.477 kb on + strand, within MPMX20_02381at 2511.477 kb on + strand, within MPMX20_02381at 2511.487 kb on + strand, within MPMX20_02381at 2511.495 kb on - strand, within MPMX20_02381at 2511.495 kb on - strand, within MPMX20_02381at 2511.519 kb on - strand, within MPMX20_02381at 2511.529 kb on - strand, within MPMX20_02381at 2511.585 kb on - strand, within MPMX20_02381at 2511.612 kb on - strand, within MPMX20_02381at 2511.646 kb on + strand, within MPMX20_02381at 2511.668 kb on - strand, within MPMX20_02381at 2511.721 kb on - strand, within MPMX20_02381at 2511.729 kb on - strand, within MPMX20_02381at 2511.735 kb on + strand, within MPMX20_02381at 2511.791 kb on + strand, within MPMX20_02381at 2511.859 kb on - strand, within MPMX20_02381at 2511.871 kb on + strand, within MPMX20_02381at 2512.089 kb on - strandat 2512.096 kb on + strandat 2512.145 kb on + strand, within MPMX20_02382at 2512.147 kb on + strand, within MPMX20_02382at 2512.147 kb on + strand, within MPMX20_02382at 2512.147 kb on + strand, within MPMX20_02382at 2512.211 kb on - strand, within MPMX20_02382at 2512.234 kb on - strand, within MPMX20_02382at 2512.311 kb on + strand, within MPMX20_02382at 2512.355 kb on + strand, within MPMX20_02382at 2512.398 kb on + strand, within MPMX20_02382at 2512.526 kb on - strandat 2512.634 kb on + strandat 2512.634 kb on + strandat 2512.634 kb on + strandat 2512.634 kb on + strandat 2512.634 kb on + strandat 2512.634 kb on + strandat 2512.634 kb on + strandat 2512.642 kb on - strandat 2512.642 kb on - strandat 2512.642 kb on - strandat 2512.657 kb on - strandat 2512.699 kb on + strandat 2512.699 kb on + strandat 2512.707 kb on - strandat 2512.718 kb on - strand, within MPMX20_02383at 2512.841 kb on + strand, within MPMX20_02383at 2512.849 kb on - strand, within MPMX20_02383at 2512.858 kb on + strand, within MPMX20_02383at 2512.858 kb on + strand, within MPMX20_02383at 2512.858 kb on + strand, within MPMX20_02383at 2512.859 kb on - strand, within MPMX20_02383at 2512.866 kb on - strand, within MPMX20_02383at 2512.931 kb on + strand, within MPMX20_02383at 2513.016 kb on + strand, within MPMX20_02383at 2513.029 kb on + strand, within MPMX20_02383at 2513.058 kb on - strand, within MPMX20_02383at 2513.080 kb on + strand, within MPMX20_02383at 2513.101 kb on - strand, within MPMX20_02383at 2513.170 kb on + strand, within MPMX20_02383at 2513.178 kb on - strand, within MPMX20_02383at 2513.178 kb on - strand, within MPMX20_02383at 2513.195 kb on + strand, within MPMX20_02383at 2513.202 kb on + strand, within MPMX20_02383at 2513.225 kb on - strand, within MPMX20_02383at 2513.225 kb on - strand, within MPMX20_02383at 2513.261 kb on + strand, within MPMX20_02383at 2513.290 kb on - strand, within MPMX20_02383at 2513.291 kb on - strand, within MPMX20_02383at 2513.426 kb on - strand, within MPMX20_02383at 2513.426 kb on - strand, within MPMX20_02383at 2513.426 kb on - strand, within MPMX20_02383at 2513.487 kb on - strand, within MPMX20_02383at 2513.487 kb on - strand, within MPMX20_02383at 2513.502 kb on + strand, within MPMX20_02383

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Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
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2,511,076 - MPMX20_02381 0.15 -1.1
2,511,129 - MPMX20_02381 0.20 +0.1
2,511,136 - MPMX20_02381 0.21 +2.1
2,511,173 + MPMX20_02381 0.24 +1.5
2,511,288 + MPMX20_02381 0.35 -0.2
2,511,319 + MPMX20_02381 0.38 +1.0
2,511,321 + MPMX20_02381 0.38 +1.1
2,511,327 - MPMX20_02381 0.39 -3.5
2,511,340 + MPMX20_02381 0.40 -0.5
2,511,415 - MPMX20_02381 0.47 -2.1
2,511,420 - MPMX20_02381 0.47 +1.6
2,511,422 + MPMX20_02381 0.47 +0.2
2,511,430 - MPMX20_02381 0.48 +0.1
2,511,435 - MPMX20_02381 0.49 -2.4
2,511,477 + MPMX20_02381 0.53 -1.1
2,511,477 + MPMX20_02381 0.53 +2.5
2,511,487 + MPMX20_02381 0.54 -0.0
2,511,495 - MPMX20_02381 0.54 -1.8
2,511,495 - MPMX20_02381 0.54 -2.8
2,511,519 - MPMX20_02381 0.57 +1.1
2,511,529 - MPMX20_02381 0.57 +2.1
2,511,585 - MPMX20_02381 0.63 -2.5
2,511,612 - MPMX20_02381 0.65 -1.4
2,511,646 + MPMX20_02381 0.68 +0.1
2,511,668 - MPMX20_02381 0.70 -0.5
2,511,721 - MPMX20_02381 0.75 -0.7
2,511,729 - MPMX20_02381 0.76 +2.3
2,511,735 + MPMX20_02381 0.77 -4.0
2,511,791 + MPMX20_02381 0.82 +1.6
2,511,859 - MPMX20_02381 0.88 +1.4
2,511,871 + MPMX20_02381 0.89 -0.9
2,512,089 - -0.3
2,512,096 + +0.1
2,512,145 + MPMX20_02382 0.17 +3.8
2,512,147 + MPMX20_02382 0.18 -3.3
2,512,147 + MPMX20_02382 0.18 -3.0
2,512,147 + MPMX20_02382 0.18 +1.2
2,512,211 - MPMX20_02382 0.32 -0.5
2,512,234 - MPMX20_02382 0.37 +1.7
2,512,311 + MPMX20_02382 0.54 +0.8
2,512,355 + MPMX20_02382 0.63 +1.1
2,512,398 + MPMX20_02382 0.73 -3.5
2,512,526 - -0.5
2,512,634 + -1.9
2,512,634 + -1.1
2,512,634 + +1.1
2,512,634 + -3.0
2,512,634 + +0.8
2,512,634 + -0.5
2,512,634 + -1.1
2,512,642 - +2.5
2,512,642 - +0.5
2,512,642 - +1.6
2,512,657 - -1.1
2,512,699 + +1.7
2,512,699 + +2.1
2,512,707 - +1.6
2,512,718 - MPMX20_02383 0.10 +0.5
2,512,841 + MPMX20_02383 0.19 +0.4
2,512,849 - MPMX20_02383 0.19 +0.4
2,512,858 + MPMX20_02383 0.20 +1.4
2,512,858 + MPMX20_02383 0.20 -1.4
2,512,858 + MPMX20_02383 0.20 -4.2
2,512,859 - MPMX20_02383 0.20 +1.0
2,512,866 - MPMX20_02383 0.20 -4.2
2,512,931 + MPMX20_02383 0.25 -1.1
2,513,016 + MPMX20_02383 0.31 +2.1
2,513,029 + MPMX20_02383 0.31 +1.7
2,513,058 - MPMX20_02383 0.33 +2.4
2,513,080 + MPMX20_02383 0.35 -0.9
2,513,101 - MPMX20_02383 0.36 -1.1
2,513,170 + MPMX20_02383 0.41 -1.5
2,513,178 - MPMX20_02383 0.41 -2.5
2,513,178 - MPMX20_02383 0.41 -0.5
2,513,195 + MPMX20_02383 0.43 -2.5
2,513,202 + MPMX20_02383 0.43 -2.8
2,513,225 - MPMX20_02383 0.45 -2.2
2,513,225 - MPMX20_02383 0.45 -2.6
2,513,261 + MPMX20_02383 0.47 +2.0
2,513,290 - MPMX20_02383 0.49 -2.1
2,513,291 - MPMX20_02383 0.49 +0.6
2,513,426 - MPMX20_02383 0.58 +0.7
2,513,426 - MPMX20_02383 0.58 +1.8
2,513,426 - MPMX20_02383 0.58 -2.1
2,513,487 - MPMX20_02383 0.62 +1.7
2,513,487 - MPMX20_02383 0.62 -1.3
2,513,502 + MPMX20_02383 0.63 +2.6

Or see this region's nucleotide sequence