Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02326

Experiment: octanoate (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX20_02324 and MPMX20_02325 overlap by 4 nucleotidesMPMX20_02325 and MPMX20_02326 are separated by 244 nucleotidesMPMX20_02326 and MPMX20_02327 are separated by 0 nucleotides MPMX20_02324: MPMX20_02324 - hypothetical protein, at 2,446,575 to 2,447,561 _02324 MPMX20_02325: MPMX20_02325 - hypothetical protein, at 2,447,558 to 2,448,280 _02325 MPMX20_02326: MPMX20_02326 - hypothetical protein, at 2,448,525 to 2,449,073 _02326 MPMX20_02327: MPMX20_02327 - Glycogen operon protein GlgX, at 2,449,074 to 2,451,149 _02327 Position (kb) 2448 2449 2450Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 2447.572 kb on + strandat 2447.580 kb on - strandat 2447.580 kb on - strandat 2447.582 kb on - strandat 2447.592 kb on + strandat 2447.597 kb on + strandat 2447.704 kb on + strand, within MPMX20_02325at 2447.704 kb on + strand, within MPMX20_02325at 2447.712 kb on - strand, within MPMX20_02325at 2447.747 kb on - strand, within MPMX20_02325at 2447.812 kb on - strand, within MPMX20_02325at 2447.823 kb on + strand, within MPMX20_02325at 2447.824 kb on + strand, within MPMX20_02325at 2447.834 kb on + strand, within MPMX20_02325at 2447.921 kb on - strand, within MPMX20_02325at 2447.921 kb on - strand, within MPMX20_02325at 2447.944 kb on - strand, within MPMX20_02325at 2447.955 kb on - strand, within MPMX20_02325at 2447.981 kb on - strand, within MPMX20_02325at 2448.021 kb on + strand, within MPMX20_02325at 2448.026 kb on + strand, within MPMX20_02325at 2448.029 kb on - strand, within MPMX20_02325at 2448.048 kb on - strand, within MPMX20_02325at 2448.085 kb on + strand, within MPMX20_02325at 2448.085 kb on + strand, within MPMX20_02325at 2448.085 kb on + strand, within MPMX20_02325at 2448.093 kb on - strand, within MPMX20_02325at 2448.093 kb on - strand, within MPMX20_02325at 2448.265 kb on + strandat 2448.265 kb on + strandat 2448.273 kb on - strandat 2448.273 kb on - strandat 2448.273 kb on - strandat 2448.292 kb on - strandat 2448.292 kb on - strandat 2448.292 kb on - strandat 2448.292 kb on - strandat 2448.292 kb on - strandat 2448.302 kb on - strandat 2448.377 kb on + strandat 2448.501 kb on + strandat 2448.510 kb on + strandat 2448.521 kb on + strandat 2448.529 kb on + strandat 2448.529 kb on - strandat 2448.529 kb on - strandat 2448.529 kb on - strandat 2448.630 kb on + strand, within MPMX20_02326at 2448.636 kb on + strand, within MPMX20_02326at 2448.753 kb on - strand, within MPMX20_02326at 2448.787 kb on + strand, within MPMX20_02326at 2448.823 kb on + strand, within MPMX20_02326at 2448.842 kb on + strand, within MPMX20_02326at 2448.847 kb on + strand, within MPMX20_02326at 2448.850 kb on - strand, within MPMX20_02326at 2448.964 kb on - strand, within MPMX20_02326at 2448.998 kb on + strand, within MPMX20_02326at 2449.000 kb on - strand, within MPMX20_02326at 2449.022 kb on + strandat 2449.022 kb on + strandat 2449.027 kb on + strandat 2449.027 kb on + strandat 2449.030 kb on - strandat 2449.035 kb on + strandat 2449.072 kb on + strandat 2449.072 kb on + strandat 2449.072 kb on + strandat 2449.072 kb on + strandat 2449.072 kb on + strandat 2449.072 kb on + strandat 2449.072 kb on + strandat 2449.072 kb on + strandat 2449.076 kb on - strandat 2449.080 kb on - strandat 2449.080 kb on - strandat 2449.080 kb on - strandat 2449.080 kb on - strandat 2449.080 kb on - strandat 2449.126 kb on + strandat 2449.131 kb on + strandat 2449.147 kb on + strandat 2449.274 kb on - strandat 2449.301 kb on - strand, within MPMX20_02327at 2449.311 kb on + strand, within MPMX20_02327at 2449.312 kb on - strand, within MPMX20_02327at 2449.408 kb on + strand, within MPMX20_02327at 2449.500 kb on - strand, within MPMX20_02327at 2449.500 kb on - strand, within MPMX20_02327at 2449.509 kb on + strand, within MPMX20_02327at 2449.509 kb on + strand, within MPMX20_02327at 2449.517 kb on - strand, within MPMX20_02327at 2449.579 kb on - strand, within MPMX20_02327at 2449.598 kb on - strand, within MPMX20_02327at 2449.626 kb on + strand, within MPMX20_02327at 2449.705 kb on + strand, within MPMX20_02327at 2449.713 kb on + strand, within MPMX20_02327at 2449.729 kb on + strand, within MPMX20_02327at 2449.761 kb on + strand, within MPMX20_02327at 2449.766 kb on + strand, within MPMX20_02327at 2449.811 kb on + strand, within MPMX20_02327at 2449.838 kb on - strand, within MPMX20_02327at 2449.885 kb on - strand, within MPMX20_02327at 2449.885 kb on - strand, within MPMX20_02327at 2449.936 kb on - strand, within MPMX20_02327at 2449.981 kb on + strand, within MPMX20_02327at 2449.994 kb on - strand, within MPMX20_02327at 2450.017 kb on + strand, within MPMX20_02327at 2450.057 kb on + strand, within MPMX20_02327at 2450.057 kb on + strand, within MPMX20_02327at 2450.057 kb on + strand, within MPMX20_02327at 2450.057 kb on + strand, within MPMX20_02327at 2450.057 kb on + strand, within MPMX20_02327at 2450.064 kb on + strand, within MPMX20_02327

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
remove
2,447,572 + -2.9
2,447,580 - -2.5
2,447,580 - +0.9
2,447,582 - +2.1
2,447,592 + -0.5
2,447,597 + -2.9
2,447,704 + MPMX20_02325 0.20 +0.2
2,447,704 + MPMX20_02325 0.20 -2.3
2,447,712 - MPMX20_02325 0.21 +0.7
2,447,747 - MPMX20_02325 0.26 +1.6
2,447,812 - MPMX20_02325 0.35 -2.3
2,447,823 + MPMX20_02325 0.37 -2.5
2,447,824 + MPMX20_02325 0.37 -2.6
2,447,834 + MPMX20_02325 0.38 -3.5
2,447,921 - MPMX20_02325 0.50 -0.8
2,447,921 - MPMX20_02325 0.50 +1.9
2,447,944 - MPMX20_02325 0.53 -0.4
2,447,955 - MPMX20_02325 0.55 +0.1
2,447,981 - MPMX20_02325 0.59 -2.8
2,448,021 + MPMX20_02325 0.64 +1.1
2,448,026 + MPMX20_02325 0.65 +2.3
2,448,029 - MPMX20_02325 0.65 +1.2
2,448,048 - MPMX20_02325 0.68 -0.1
2,448,085 + MPMX20_02325 0.73 -3.0
2,448,085 + MPMX20_02325 0.73 -2.9
2,448,085 + MPMX20_02325 0.73 +1.7
2,448,093 - MPMX20_02325 0.74 -0.9
2,448,093 - MPMX20_02325 0.74 -2.3
2,448,265 + +1.4
2,448,265 + -3.9
2,448,273 - -1.9
2,448,273 - +2.2
2,448,273 - +0.8
2,448,292 - +0.6
2,448,292 - -1.8
2,448,292 - +1.2
2,448,292 - -2.1
2,448,292 - +2.0
2,448,302 - +3.1
2,448,377 + +0.5
2,448,501 + -1.6
2,448,510 + +0.5
2,448,521 + -1.4
2,448,529 + -1.9
2,448,529 - +2.3
2,448,529 - +1.6
2,448,529 - -1.8
2,448,630 + MPMX20_02326 0.19 +0.3
2,448,636 + MPMX20_02326 0.20 +1.9
2,448,753 - MPMX20_02326 0.42 -1.3
2,448,787 + MPMX20_02326 0.48 +0.1
2,448,823 + MPMX20_02326 0.54 +1.6
2,448,842 + MPMX20_02326 0.58 -2.6
2,448,847 + MPMX20_02326 0.59 +1.8
2,448,850 - MPMX20_02326 0.59 +2.6
2,448,964 - MPMX20_02326 0.80 -1.3
2,448,998 + MPMX20_02326 0.86 +1.1
2,449,000 - MPMX20_02326 0.87 -2.5
2,449,022 + -2.6
2,449,022 + -1.3
2,449,027 + -0.8
2,449,027 + +2.1
2,449,030 - +2.7
2,449,035 + +0.3
2,449,072 + +0.5
2,449,072 + -2.9
2,449,072 + +0.4
2,449,072 + -2.0
2,449,072 + -1.3
2,449,072 + -0.3
2,449,072 + -1.8
2,449,072 + -1.5
2,449,076 - +2.6
2,449,080 - -2.4
2,449,080 - +1.1
2,449,080 - -0.0
2,449,080 - +1.2
2,449,080 - -3.6
2,449,126 + -2.5
2,449,131 + -1.4
2,449,147 + -3.2
2,449,274 - -2.3
2,449,301 - MPMX20_02327 0.11 +2.0
2,449,311 + MPMX20_02327 0.11 +1.4
2,449,312 - MPMX20_02327 0.11 +0.5
2,449,408 + MPMX20_02327 0.16 -1.9
2,449,500 - MPMX20_02327 0.21 -1.4
2,449,500 - MPMX20_02327 0.21 -2.5
2,449,509 + MPMX20_02327 0.21 -1.8
2,449,509 + MPMX20_02327 0.21 -1.5
2,449,517 - MPMX20_02327 0.21 -1.4
2,449,579 - MPMX20_02327 0.24 -3.5
2,449,598 - MPMX20_02327 0.25 +0.8
2,449,626 + MPMX20_02327 0.27 +3.4
2,449,705 + MPMX20_02327 0.30 -2.3
2,449,713 + MPMX20_02327 0.31 -1.6
2,449,729 + MPMX20_02327 0.32 +1.6
2,449,761 + MPMX20_02327 0.33 -3.6
2,449,766 + MPMX20_02327 0.33 -1.6
2,449,811 + MPMX20_02327 0.36 -0.8
2,449,838 - MPMX20_02327 0.37 -2.9
2,449,885 - MPMX20_02327 0.39 -2.5
2,449,885 - MPMX20_02327 0.39 -1.9
2,449,936 - MPMX20_02327 0.42 -1.9
2,449,981 + MPMX20_02327 0.44 +1.1
2,449,994 - MPMX20_02327 0.44 +0.0
2,450,017 + MPMX20_02327 0.45 -1.8
2,450,057 + MPMX20_02327 0.47 +1.6
2,450,057 + MPMX20_02327 0.47 -0.9
2,450,057 + MPMX20_02327 0.47 -2.4
2,450,057 + MPMX20_02327 0.47 -0.9
2,450,057 + MPMX20_02327 0.47 -3.0
2,450,064 + MPMX20_02327 0.48 +1.7

Or see this region's nucleotide sequence