Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02324 and MPMX20_02325 overlap by 4 nucleotides MPMX20_02325 and MPMX20_02326 are separated by 244 nucleotides MPMX20_02326 and MPMX20_02327 are separated by 0 nucleotides
MPMX20_02324: MPMX20_02324 - hypothetical protein, at 2,446,575 to 2,447,561
_02324
MPMX20_02325: MPMX20_02325 - hypothetical protein, at 2,447,558 to 2,448,280
_02325
MPMX20_02326: MPMX20_02326 - hypothetical protein, at 2,448,525 to 2,449,073
_02326
MPMX20_02327: MPMX20_02327 - Glycogen operon protein GlgX, at 2,449,074 to 2,451,149
_02327
Position (kb)
2448
2449
2450 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 2447.572 kb on + strand at 2447.580 kb on - strand at 2447.580 kb on - strand at 2447.582 kb on - strand at 2447.592 kb on + strand at 2447.597 kb on + strand at 2447.704 kb on + strand, within MPMX20_02325 at 2447.704 kb on + strand, within MPMX20_02325 at 2447.712 kb on - strand, within MPMX20_02325 at 2447.747 kb on - strand, within MPMX20_02325 at 2447.812 kb on - strand, within MPMX20_02325 at 2447.823 kb on + strand, within MPMX20_02325 at 2447.824 kb on + strand, within MPMX20_02325 at 2447.834 kb on + strand, within MPMX20_02325 at 2447.921 kb on - strand, within MPMX20_02325 at 2447.921 kb on - strand, within MPMX20_02325 at 2447.944 kb on - strand, within MPMX20_02325 at 2447.955 kb on - strand, within MPMX20_02325 at 2447.981 kb on - strand, within MPMX20_02325 at 2448.021 kb on + strand, within MPMX20_02325 at 2448.026 kb on + strand, within MPMX20_02325 at 2448.029 kb on - strand, within MPMX20_02325 at 2448.048 kb on - strand, within MPMX20_02325 at 2448.085 kb on + strand, within MPMX20_02325 at 2448.085 kb on + strand, within MPMX20_02325 at 2448.085 kb on + strand, within MPMX20_02325 at 2448.093 kb on - strand, within MPMX20_02325 at 2448.093 kb on - strand, within MPMX20_02325 at 2448.265 kb on + strand at 2448.265 kb on + strand at 2448.273 kb on - strand at 2448.273 kb on - strand at 2448.273 kb on - strand at 2448.292 kb on - strand at 2448.292 kb on - strand at 2448.292 kb on - strand at 2448.292 kb on - strand at 2448.292 kb on - strand at 2448.302 kb on - strand at 2448.377 kb on + strand at 2448.501 kb on + strand at 2448.510 kb on + strand at 2448.521 kb on + strand at 2448.529 kb on + strand at 2448.529 kb on - strand at 2448.529 kb on - strand at 2448.529 kb on - strand at 2448.630 kb on + strand, within MPMX20_02326 at 2448.636 kb on + strand, within MPMX20_02326 at 2448.753 kb on - strand, within MPMX20_02326 at 2448.787 kb on + strand, within MPMX20_02326 at 2448.823 kb on + strand, within MPMX20_02326 at 2448.842 kb on + strand, within MPMX20_02326 at 2448.847 kb on + strand, within MPMX20_02326 at 2448.850 kb on - strand, within MPMX20_02326 at 2448.964 kb on - strand, within MPMX20_02326 at 2448.998 kb on + strand, within MPMX20_02326 at 2449.000 kb on - strand, within MPMX20_02326 at 2449.022 kb on + strand at 2449.022 kb on + strand at 2449.027 kb on + strand at 2449.027 kb on + strand at 2449.030 kb on - strand at 2449.035 kb on + strand at 2449.072 kb on + strand at 2449.072 kb on + strand at 2449.072 kb on + strand at 2449.072 kb on + strand at 2449.072 kb on + strand at 2449.072 kb on + strand at 2449.072 kb on + strand at 2449.072 kb on + strand at 2449.076 kb on - strand at 2449.080 kb on - strand at 2449.080 kb on - strand at 2449.080 kb on - strand at 2449.080 kb on - strand at 2449.080 kb on - strand at 2449.126 kb on + strand at 2449.131 kb on + strand at 2449.147 kb on + strand at 2449.274 kb on - strand at 2449.301 kb on - strand, within MPMX20_02327 at 2449.311 kb on + strand, within MPMX20_02327 at 2449.312 kb on - strand, within MPMX20_02327 at 2449.408 kb on + strand, within MPMX20_02327 at 2449.500 kb on - strand, within MPMX20_02327 at 2449.500 kb on - strand, within MPMX20_02327 at 2449.509 kb on + strand, within MPMX20_02327 at 2449.509 kb on + strand, within MPMX20_02327 at 2449.517 kb on - strand, within MPMX20_02327 at 2449.579 kb on - strand, within MPMX20_02327 at 2449.598 kb on - strand, within MPMX20_02327 at 2449.626 kb on + strand, within MPMX20_02327 at 2449.705 kb on + strand, within MPMX20_02327 at 2449.713 kb on + strand, within MPMX20_02327 at 2449.729 kb on + strand, within MPMX20_02327 at 2449.761 kb on + strand, within MPMX20_02327 at 2449.766 kb on + strand, within MPMX20_02327 at 2449.811 kb on + strand, within MPMX20_02327 at 2449.838 kb on - strand, within MPMX20_02327 at 2449.885 kb on - strand, within MPMX20_02327 at 2449.885 kb on - strand, within MPMX20_02327 at 2449.936 kb on - strand, within MPMX20_02327 at 2449.981 kb on + strand, within MPMX20_02327 at 2449.994 kb on - strand, within MPMX20_02327 at 2450.017 kb on + strand, within MPMX20_02327 at 2450.057 kb on + strand, within MPMX20_02327 at 2450.057 kb on + strand, within MPMX20_02327 at 2450.057 kb on + strand, within MPMX20_02327 at 2450.057 kb on + strand, within MPMX20_02327 at 2450.057 kb on + strand, within MPMX20_02327 at 2450.064 kb on + strand, within MPMX20_02327
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 2,447,572 + -2.9 2,447,580 - -2.5 2,447,580 - +0.9 2,447,582 - +2.1 2,447,592 + -0.5 2,447,597 + -2.9 2,447,704 + MPMX20_02325 0.20 +0.2 2,447,704 + MPMX20_02325 0.20 -2.3 2,447,712 - MPMX20_02325 0.21 +0.7 2,447,747 - MPMX20_02325 0.26 +1.6 2,447,812 - MPMX20_02325 0.35 -2.3 2,447,823 + MPMX20_02325 0.37 -2.5 2,447,824 + MPMX20_02325 0.37 -2.6 2,447,834 + MPMX20_02325 0.38 -3.5 2,447,921 - MPMX20_02325 0.50 -0.8 2,447,921 - MPMX20_02325 0.50 +1.9 2,447,944 - MPMX20_02325 0.53 -0.4 2,447,955 - MPMX20_02325 0.55 +0.1 2,447,981 - MPMX20_02325 0.59 -2.8 2,448,021 + MPMX20_02325 0.64 +1.1 2,448,026 + MPMX20_02325 0.65 +2.3 2,448,029 - MPMX20_02325 0.65 +1.2 2,448,048 - MPMX20_02325 0.68 -0.1 2,448,085 + MPMX20_02325 0.73 -3.0 2,448,085 + MPMX20_02325 0.73 -2.9 2,448,085 + MPMX20_02325 0.73 +1.7 2,448,093 - MPMX20_02325 0.74 -0.9 2,448,093 - MPMX20_02325 0.74 -2.3 2,448,265 + +1.4 2,448,265 + -3.9 2,448,273 - -1.9 2,448,273 - +2.2 2,448,273 - +0.8 2,448,292 - +0.6 2,448,292 - -1.8 2,448,292 - +1.2 2,448,292 - -2.1 2,448,292 - +2.0 2,448,302 - +3.1 2,448,377 + +0.5 2,448,501 + -1.6 2,448,510 + +0.5 2,448,521 + -1.4 2,448,529 + -1.9 2,448,529 - +2.3 2,448,529 - +1.6 2,448,529 - -1.8 2,448,630 + MPMX20_02326 0.19 +0.3 2,448,636 + MPMX20_02326 0.20 +1.9 2,448,753 - MPMX20_02326 0.42 -1.3 2,448,787 + MPMX20_02326 0.48 +0.1 2,448,823 + MPMX20_02326 0.54 +1.6 2,448,842 + MPMX20_02326 0.58 -2.6 2,448,847 + MPMX20_02326 0.59 +1.8 2,448,850 - MPMX20_02326 0.59 +2.6 2,448,964 - MPMX20_02326 0.80 -1.3 2,448,998 + MPMX20_02326 0.86 +1.1 2,449,000 - MPMX20_02326 0.87 -2.5 2,449,022 + -2.6 2,449,022 + -1.3 2,449,027 + -0.8 2,449,027 + +2.1 2,449,030 - +2.7 2,449,035 + +0.3 2,449,072 + +0.5 2,449,072 + -2.9 2,449,072 + +0.4 2,449,072 + -2.0 2,449,072 + -1.3 2,449,072 + -0.3 2,449,072 + -1.8 2,449,072 + -1.5 2,449,076 - +2.6 2,449,080 - -2.4 2,449,080 - +1.1 2,449,080 - -0.0 2,449,080 - +1.2 2,449,080 - -3.6 2,449,126 + -2.5 2,449,131 + -1.4 2,449,147 + -3.2 2,449,274 - -2.3 2,449,301 - MPMX20_02327 0.11 +2.0 2,449,311 + MPMX20_02327 0.11 +1.4 2,449,312 - MPMX20_02327 0.11 +0.5 2,449,408 + MPMX20_02327 0.16 -1.9 2,449,500 - MPMX20_02327 0.21 -1.4 2,449,500 - MPMX20_02327 0.21 -2.5 2,449,509 + MPMX20_02327 0.21 -1.8 2,449,509 + MPMX20_02327 0.21 -1.5 2,449,517 - MPMX20_02327 0.21 -1.4 2,449,579 - MPMX20_02327 0.24 -3.5 2,449,598 - MPMX20_02327 0.25 +0.8 2,449,626 + MPMX20_02327 0.27 +3.4 2,449,705 + MPMX20_02327 0.30 -2.3 2,449,713 + MPMX20_02327 0.31 -1.6 2,449,729 + MPMX20_02327 0.32 +1.6 2,449,761 + MPMX20_02327 0.33 -3.6 2,449,766 + MPMX20_02327 0.33 -1.6 2,449,811 + MPMX20_02327 0.36 -0.8 2,449,838 - MPMX20_02327 0.37 -2.9 2,449,885 - MPMX20_02327 0.39 -2.5 2,449,885 - MPMX20_02327 0.39 -1.9 2,449,936 - MPMX20_02327 0.42 -1.9 2,449,981 + MPMX20_02327 0.44 +1.1 2,449,994 - MPMX20_02327 0.44 +0.0 2,450,017 + MPMX20_02327 0.45 -1.8 2,450,057 + MPMX20_02327 0.47 +1.6 2,450,057 + MPMX20_02327 0.47 -0.9 2,450,057 + MPMX20_02327 0.47 -2.4 2,450,057 + MPMX20_02327 0.47 -0.9 2,450,057 + MPMX20_02327 0.47 -3.0 2,450,064 + MPMX20_02327 0.48 +1.7
Or see this region's nucleotide sequence