Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02277

Experiment: octanoate (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX20_02276 and MPMX20_02277 are separated by 202 nucleotidesMPMX20_02277 and MPMX20_02278 overlap by 13 nucleotidesMPMX20_02278 and MPMX20_02279 are separated by 143 nucleotides MPMX20_02276: MPMX20_02276 - Altronate oxidoreductase, at 2,387,153 to 2,388,604 _02276 MPMX20_02277: MPMX20_02277 - hypothetical protein, at 2,388,807 to 2,389,721 _02277 MPMX20_02278: MPMX20_02278 - hypothetical protein, at 2,389,709 to 2,390,257 _02278 MPMX20_02279: MPMX20_02279 - hypothetical protein, at 2,390,401 to 2,390,841 _02279 Position (kb) 2388 2389 2390Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2 3 4at 2387.830 kb on + strand, within MPMX20_02276at 2388.004 kb on + strand, within MPMX20_02276at 2388.010 kb on - strand, within MPMX20_02276at 2388.081 kb on + strand, within MPMX20_02276at 2388.091 kb on - strand, within MPMX20_02276at 2388.225 kb on + strand, within MPMX20_02276at 2388.301 kb on + strand, within MPMX20_02276at 2388.383 kb on + strand, within MPMX20_02276at 2388.391 kb on - strand, within MPMX20_02276at 2388.391 kb on - strand, within MPMX20_02276at 2388.402 kb on + strand, within MPMX20_02276at 2388.421 kb on + strand, within MPMX20_02276at 2388.421 kb on + strand, within MPMX20_02276at 2388.421 kb on + strand, within MPMX20_02276at 2388.429 kb on - strand, within MPMX20_02276at 2388.453 kb on - strand, within MPMX20_02276at 2388.471 kb on + strandat 2388.471 kb on + strandat 2388.517 kb on + strandat 2388.517 kb on + strandat 2388.525 kb on - strandat 2388.546 kb on - strandat 2388.558 kb on + strandat 2388.565 kb on + strandat 2388.752 kb on + strandat 2388.859 kb on + strandat 2388.867 kb on - strandat 2388.972 kb on + strand, within MPMX20_02277at 2389.042 kb on + strand, within MPMX20_02277at 2389.050 kb on - strand, within MPMX20_02277at 2389.058 kb on + strand, within MPMX20_02277at 2389.114 kb on + strand, within MPMX20_02277at 2389.134 kb on - strand, within MPMX20_02277at 2389.178 kb on + strand, within MPMX20_02277at 2389.185 kb on + strand, within MPMX20_02277at 2389.193 kb on - strand, within MPMX20_02277at 2389.297 kb on - strand, within MPMX20_02277at 2389.336 kb on + strand, within MPMX20_02277at 2389.466 kb on - strand, within MPMX20_02277at 2389.466 kb on - strand, within MPMX20_02277at 2389.500 kb on + strand, within MPMX20_02277at 2389.508 kb on - strand, within MPMX20_02277at 2389.513 kb on - strand, within MPMX20_02277at 2389.526 kb on - strand, within MPMX20_02277at 2389.554 kb on - strand, within MPMX20_02277at 2389.628 kb on + strand, within MPMX20_02277at 2389.637 kb on + strandat 2389.650 kb on - strandat 2389.676 kb on - strandat 2389.715 kb on + strandat 2389.717 kb on + strandat 2389.723 kb on - strandat 2389.728 kb on - strandat 2389.756 kb on + strandat 2389.773 kb on + strand, within MPMX20_02278at 2389.823 kb on + strand, within MPMX20_02278at 2389.844 kb on + strand, within MPMX20_02278at 2389.844 kb on + strand, within MPMX20_02278at 2389.852 kb on - strand, within MPMX20_02278at 2389.881 kb on - strand, within MPMX20_02278at 2389.917 kb on + strand, within MPMX20_02278at 2389.920 kb on - strand, within MPMX20_02278at 2389.938 kb on + strand, within MPMX20_02278at 2389.938 kb on + strand, within MPMX20_02278at 2389.938 kb on + strand, within MPMX20_02278at 2389.938 kb on + strand, within MPMX20_02278at 2389.939 kb on - strand, within MPMX20_02278at 2389.946 kb on - strand, within MPMX20_02278at 2389.970 kb on - strand, within MPMX20_02278at 2389.992 kb on + strand, within MPMX20_02278at 2390.031 kb on + strand, within MPMX20_02278at 2390.054 kb on - strand, within MPMX20_02278at 2390.054 kb on - strand, within MPMX20_02278at 2390.054 kb on - strand, within MPMX20_02278at 2390.054 kb on - strand, within MPMX20_02278at 2390.054 kb on - strand, within MPMX20_02278at 2390.097 kb on + strand, within MPMX20_02278at 2390.127 kb on + strand, within MPMX20_02278at 2390.127 kb on + strand, within MPMX20_02278at 2390.127 kb on + strand, within MPMX20_02278at 2390.127 kb on + strand, within MPMX20_02278at 2390.127 kb on + strand, within MPMX20_02278at 2390.127 kb on + strand, within MPMX20_02278at 2390.127 kb on + strand, within MPMX20_02278at 2390.127 kb on + strand, within MPMX20_02278at 2390.127 kb on + strand, within MPMX20_02278at 2390.127 kb on + strand, within MPMX20_02278at 2390.134 kb on + strand, within MPMX20_02278at 2390.134 kb on - strand, within MPMX20_02278at 2390.134 kb on - strand, within MPMX20_02278at 2390.134 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.135 kb on - strand, within MPMX20_02278at 2390.137 kb on - strand, within MPMX20_02278at 2390.142 kb on - strand, within MPMX20_02278at 2390.142 kb on - strand, within MPMX20_02278at 2390.142 kb on - strand, within MPMX20_02278at 2390.158 kb on + strand, within MPMX20_02278at 2390.172 kb on + strand, within MPMX20_02278at 2390.172 kb on + strand, within MPMX20_02278at 2390.172 kb on + strand, within MPMX20_02278at 2390.191 kb on + strand, within MPMX20_02278at 2390.202 kb on + strand, within MPMX20_02278at 2390.205 kb on - strandat 2390.207 kb on + strandat 2390.230 kb on + strandat 2390.272 kb on + strandat 2390.272 kb on + strandat 2390.272 kb on + strandat 2390.272 kb on + strandat 2390.280 kb on - strandat 2390.343 kb on - strandat 2390.353 kb on + strandat 2390.397 kb on + strandat 2390.397 kb on + strandat 2390.405 kb on - strandat 2390.405 kb on - strandat 2390.405 kb on - strandat 2390.419 kb on + strandat 2390.420 kb on - strandat 2390.427 kb on - strandat 2390.441 kb on - strandat 2390.473 kb on - strand, within MPMX20_02279at 2390.483 kb on + strand, within MPMX20_02279at 2390.527 kb on - strand, within MPMX20_02279at 2390.621 kb on + strand, within MPMX20_02279at 2390.627 kb on - strand, within MPMX20_02279at 2390.680 kb on + strand, within MPMX20_02279

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
remove
2,387,830 + MPMX20_02276 0.47 +1.2
2,388,004 + MPMX20_02276 0.59 +0.3
2,388,010 - MPMX20_02276 0.59 +1.0
2,388,081 + MPMX20_02276 0.64 -1.1
2,388,091 - MPMX20_02276 0.65 -3.0
2,388,225 + MPMX20_02276 0.74 -3.8
2,388,301 + MPMX20_02276 0.79 -2.8
2,388,383 + MPMX20_02276 0.85 -0.5
2,388,391 - MPMX20_02276 0.85 +0.5
2,388,391 - MPMX20_02276 0.85 +0.5
2,388,402 + MPMX20_02276 0.86 +1.1
2,388,421 + MPMX20_02276 0.87 -1.1
2,388,421 + MPMX20_02276 0.87 -1.9
2,388,421 + MPMX20_02276 0.87 +1.4
2,388,429 - MPMX20_02276 0.88 +2.4
2,388,453 - MPMX20_02276 0.90 -2.2
2,388,471 + -3.1
2,388,471 + -0.9
2,388,517 + -3.0
2,388,517 + +0.3
2,388,525 - -2.2
2,388,546 - +2.3
2,388,558 + -1.5
2,388,565 + -2.3
2,388,752 + +1.8
2,388,859 + -2.7
2,388,867 - +2.4
2,388,972 + MPMX20_02277 0.18 +1.4
2,389,042 + MPMX20_02277 0.26 -0.0
2,389,050 - MPMX20_02277 0.27 +2.2
2,389,058 + MPMX20_02277 0.27 -0.8
2,389,114 + MPMX20_02277 0.34 +2.5
2,389,134 - MPMX20_02277 0.36 +2.2
2,389,178 + MPMX20_02277 0.41 -2.1
2,389,185 + MPMX20_02277 0.41 +1.8
2,389,193 - MPMX20_02277 0.42 -3.5
2,389,297 - MPMX20_02277 0.54 +2.1
2,389,336 + MPMX20_02277 0.58 +0.5
2,389,466 - MPMX20_02277 0.72 -3.0
2,389,466 - MPMX20_02277 0.72 +2.8
2,389,500 + MPMX20_02277 0.76 -1.7
2,389,508 - MPMX20_02277 0.77 -3.4
2,389,513 - MPMX20_02277 0.77 -2.7
2,389,526 - MPMX20_02277 0.79 +2.0
2,389,554 - MPMX20_02277 0.82 -1.7
2,389,628 + MPMX20_02277 0.90 +1.9
2,389,637 + -1.7
2,389,650 - -1.8
2,389,676 - -5.0
2,389,715 + -0.1
2,389,717 + +3.2
2,389,723 - -3.3
2,389,728 - +1.0
2,389,756 + +1.2
2,389,773 + MPMX20_02278 0.12 -0.2
2,389,823 + MPMX20_02278 0.21 -2.6
2,389,844 + MPMX20_02278 0.25 -2.4
2,389,844 + MPMX20_02278 0.25 -2.5
2,389,852 - MPMX20_02278 0.26 +1.1
2,389,881 - MPMX20_02278 0.31 +1.5
2,389,917 + MPMX20_02278 0.38 -0.3
2,389,920 - MPMX20_02278 0.38 -2.6
2,389,938 + MPMX20_02278 0.42 -2.0
2,389,938 + MPMX20_02278 0.42 -1.9
2,389,938 + MPMX20_02278 0.42 -3.0
2,389,938 + MPMX20_02278 0.42 +2.5
2,389,939 - MPMX20_02278 0.42 -1.1
2,389,946 - MPMX20_02278 0.43 -1.1
2,389,970 - MPMX20_02278 0.48 -2.8
2,389,992 + MPMX20_02278 0.52 +4.2
2,390,031 + MPMX20_02278 0.59 +2.8
2,390,054 - MPMX20_02278 0.63 -2.5
2,390,054 - MPMX20_02278 0.63 -0.5
2,390,054 - MPMX20_02278 0.63 +1.0
2,390,054 - MPMX20_02278 0.63 -0.1
2,390,054 - MPMX20_02278 0.63 +2.5
2,390,097 + MPMX20_02278 0.71 -1.0
2,390,127 + MPMX20_02278 0.76 -1.8
2,390,127 + MPMX20_02278 0.76 +4.2
2,390,127 + MPMX20_02278 0.76 -1.8
2,390,127 + MPMX20_02278 0.76 +0.6
2,390,127 + MPMX20_02278 0.76 -2.5
2,390,127 + MPMX20_02278 0.76 +0.5
2,390,127 + MPMX20_02278 0.76 +1.2
2,390,127 + MPMX20_02278 0.76 +0.0
2,390,127 + MPMX20_02278 0.76 -2.2
2,390,127 + MPMX20_02278 0.76 +1.8
2,390,134 + MPMX20_02278 0.77 +2.2
2,390,134 - MPMX20_02278 0.77 +1.4
2,390,134 - MPMX20_02278 0.77 -2.5
2,390,134 - MPMX20_02278 0.77 +2.0
2,390,135 - MPMX20_02278 0.78 -3.6
2,390,135 - MPMX20_02278 0.78 -2.1
2,390,135 - MPMX20_02278 0.78 -3.1
2,390,135 - MPMX20_02278 0.78 -0.4
2,390,135 - MPMX20_02278 0.78 +0.4
2,390,135 - MPMX20_02278 0.78 -1.9
2,390,135 - MPMX20_02278 0.78 +0.9
2,390,135 - MPMX20_02278 0.78 +0.0
2,390,135 - MPMX20_02278 0.78 -1.9
2,390,135 - MPMX20_02278 0.78 +1.0
2,390,135 - MPMX20_02278 0.78 -0.3
2,390,135 - MPMX20_02278 0.78 +1.1
2,390,135 - MPMX20_02278 0.78 -3.5
2,390,135 - MPMX20_02278 0.78 -2.1
2,390,135 - MPMX20_02278 0.78 -3.5
2,390,135 - MPMX20_02278 0.78 +1.7
2,390,135 - MPMX20_02278 0.78 -1.0
2,390,135 - MPMX20_02278 0.78 +1.7
2,390,135 - MPMX20_02278 0.78 +1.5
2,390,135 - MPMX20_02278 0.78 +1.9
2,390,135 - MPMX20_02278 0.78 +2.0
2,390,135 - MPMX20_02278 0.78 -1.1
2,390,137 - MPMX20_02278 0.78 -2.4
2,390,142 - MPMX20_02278 0.79 +1.0
2,390,142 - MPMX20_02278 0.79 -2.1
2,390,142 - MPMX20_02278 0.79 -2.7
2,390,158 + MPMX20_02278 0.82 -0.1
2,390,172 + MPMX20_02278 0.84 +1.6
2,390,172 + MPMX20_02278 0.84 -3.5
2,390,172 + MPMX20_02278 0.84 +0.1
2,390,191 + MPMX20_02278 0.88 +0.1
2,390,202 + MPMX20_02278 0.90 +2.4
2,390,205 - -0.3
2,390,207 + +2.4
2,390,230 + -2.0
2,390,272 + +0.5
2,390,272 + -1.1
2,390,272 + -2.0
2,390,272 + -3.1
2,390,280 - -2.0
2,390,343 - -3.0
2,390,353 + +0.0
2,390,397 + -0.3
2,390,397 + -1.3
2,390,405 - +1.0
2,390,405 - +0.6
2,390,405 - +2.8
2,390,419 + +1.8
2,390,420 - +0.4
2,390,427 - -0.2
2,390,441 - -2.0
2,390,473 - MPMX20_02279 0.16 -3.3
2,390,483 + MPMX20_02279 0.19 -2.4
2,390,527 - MPMX20_02279 0.29 +2.4
2,390,621 + MPMX20_02279 0.50 +1.8
2,390,627 - MPMX20_02279 0.51 -1.7
2,390,680 + MPMX20_02279 0.63 -2.9

Or see this region's nucleotide sequence