Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02275

Experiment: octanoate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02274 and MPMX20_02275 are separated by 82 nucleotidesMPMX20_02275 and MPMX20_02276 are separated by 117 nucleotides MPMX20_02274: MPMX20_02274 - hypothetical protein, at 2,385,460 to 2,386,425 _02274 MPMX20_02275: MPMX20_02275 - Acetyltransferase, at 2,386,508 to 2,387,035 _02275 MPMX20_02276: MPMX20_02276 - Altronate oxidoreductase, at 2,387,153 to 2,388,604 _02276 Position (kb) 2386 2387 2388Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6at 2385.515 kb on + strandat 2385.523 kb on - strandat 2385.523 kb on - strandat 2385.523 kb on - strandat 2385.523 kb on - strandat 2385.523 kb on - strandat 2385.533 kb on - strandat 2385.662 kb on + strand, within MPMX20_02274at 2385.703 kb on - strand, within MPMX20_02274at 2385.914 kb on - strand, within MPMX20_02274at 2386.007 kb on + strand, within MPMX20_02274at 2386.015 kb on - strand, within MPMX20_02274at 2386.015 kb on - strand, within MPMX20_02274at 2386.042 kb on - strand, within MPMX20_02274at 2386.051 kb on - strand, within MPMX20_02274at 2386.056 kb on - strand, within MPMX20_02274at 2386.063 kb on + strand, within MPMX20_02274at 2386.073 kb on + strand, within MPMX20_02274at 2386.111 kb on + strand, within MPMX20_02274at 2386.171 kb on - strand, within MPMX20_02274at 2386.204 kb on - strand, within MPMX20_02274at 2386.233 kb on + strand, within MPMX20_02274at 2386.243 kb on - strand, within MPMX20_02274at 2386.259 kb on - strand, within MPMX20_02274at 2386.306 kb on + strand, within MPMX20_02274at 2386.341 kb on + strandat 2386.362 kb on - strandat 2386.372 kb on - strandat 2386.372 kb on - strandat 2386.430 kb on + strandat 2386.444 kb on - strandat 2386.515 kb on + strandat 2386.517 kb on + strandat 2386.617 kb on + strand, within MPMX20_02275at 2386.625 kb on - strand, within MPMX20_02275at 2386.705 kb on + strand, within MPMX20_02275at 2386.748 kb on - strand, within MPMX20_02275at 2386.838 kb on - strand, within MPMX20_02275at 2386.867 kb on + strand, within MPMX20_02275at 2386.937 kb on - strand, within MPMX20_02275at 2387.158 kb on - strandat 2387.168 kb on - strandat 2387.183 kb on + strandat 2387.191 kb on - strandat 2387.350 kb on - strand, within MPMX20_02276at 2387.351 kb on + strand, within MPMX20_02276at 2387.361 kb on - strand, within MPMX20_02276at 2387.411 kb on + strand, within MPMX20_02276at 2387.550 kb on + strand, within MPMX20_02276at 2387.558 kb on - strand, within MPMX20_02276at 2387.628 kb on - strand, within MPMX20_02276at 2387.687 kb on - strand, within MPMX20_02276at 2387.690 kb on - strand, within MPMX20_02276at 2387.714 kb on + strand, within MPMX20_02276at 2387.719 kb on + strand, within MPMX20_02276at 2387.719 kb on + strand, within MPMX20_02276at 2387.727 kb on - strand, within MPMX20_02276at 2387.739 kb on - strand, within MPMX20_02276at 2387.775 kb on + strand, within MPMX20_02276at 2387.784 kb on + strand, within MPMX20_02276at 2387.830 kb on + strand, within MPMX20_02276at 2388.004 kb on + strand, within MPMX20_02276at 2388.010 kb on - strand, within MPMX20_02276

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Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
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2,385,515 + -2.3
2,385,523 - -2.3
2,385,523 - +5.8
2,385,523 - +0.7
2,385,523 - -3.2
2,385,523 - -1.5
2,385,533 - +0.1
2,385,662 + MPMX20_02274 0.21 -3.2
2,385,703 - MPMX20_02274 0.25 +2.7
2,385,914 - MPMX20_02274 0.47 -2.0
2,386,007 + MPMX20_02274 0.57 -3.0
2,386,015 - MPMX20_02274 0.57 -3.5
2,386,015 - MPMX20_02274 0.57 -2.0
2,386,042 - MPMX20_02274 0.60 +2.1
2,386,051 - MPMX20_02274 0.61 -2.5
2,386,056 - MPMX20_02274 0.62 -1.4
2,386,063 + MPMX20_02274 0.62 -0.9
2,386,073 + MPMX20_02274 0.63 -2.4
2,386,111 + MPMX20_02274 0.67 -1.5
2,386,171 - MPMX20_02274 0.74 +1.9
2,386,204 - MPMX20_02274 0.77 +2.1
2,386,233 + MPMX20_02274 0.80 -0.8
2,386,243 - MPMX20_02274 0.81 -1.8
2,386,259 - MPMX20_02274 0.83 -1.4
2,386,306 + MPMX20_02274 0.88 +1.5
2,386,341 + -1.9
2,386,362 - -0.5
2,386,372 - -2.0
2,386,372 - +2.3
2,386,430 + +0.5
2,386,444 - +2.1
2,386,515 + +0.6
2,386,517 + +3.6
2,386,617 + MPMX20_02275 0.21 -0.4
2,386,625 - MPMX20_02275 0.22 -0.8
2,386,705 + MPMX20_02275 0.37 +2.6
2,386,748 - MPMX20_02275 0.45 -0.5
2,386,838 - MPMX20_02275 0.62 -2.8
2,386,867 + MPMX20_02275 0.68 -1.4
2,386,937 - MPMX20_02275 0.81 -3.4
2,387,158 - +3.5
2,387,168 - -1.3
2,387,183 + -2.7
2,387,191 - +4.2
2,387,350 - MPMX20_02276 0.14 -0.0
2,387,351 + MPMX20_02276 0.14 +0.2
2,387,361 - MPMX20_02276 0.14 -1.9
2,387,411 + MPMX20_02276 0.18 +1.0
2,387,550 + MPMX20_02276 0.27 +0.9
2,387,558 - MPMX20_02276 0.28 +1.0
2,387,628 - MPMX20_02276 0.33 +0.6
2,387,687 - MPMX20_02276 0.37 -3.0
2,387,690 - MPMX20_02276 0.37 -0.1
2,387,714 + MPMX20_02276 0.39 +1.1
2,387,719 + MPMX20_02276 0.39 -2.8
2,387,719 + MPMX20_02276 0.39 +1.4
2,387,727 - MPMX20_02276 0.40 +0.8
2,387,739 - MPMX20_02276 0.40 +0.8
2,387,775 + MPMX20_02276 0.43 -0.8
2,387,784 + MPMX20_02276 0.43 -0.5
2,387,830 + MPMX20_02276 0.47 +1.2
2,388,004 + MPMX20_02276 0.59 +0.3
2,388,010 - MPMX20_02276 0.59 +1.0

Or see this region's nucleotide sequence