Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02175 and MPMX20_02176 are separated by 1 nucleotides MPMX20_02176 and MPMX20_02177 overlap by 4 nucleotides
MPMX20_02175: MPMX20_02175 - hypothetical protein, at 2,265,721 to 2,266,980
_02175
MPMX20_02176: MPMX20_02176 - hypothetical protein, at 2,266,982 to 2,267,704
_02176
MPMX20_02177: MPMX20_02177 - Tuberculostearic acid methyltransferase UfaA1, at 2,267,701 to 2,268,921
_02177
Position (kb)
2266
2267
2268 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 2265.988 kb on + strand, within MPMX20_02175 at 2266.059 kb on - strand, within MPMX20_02175 at 2266.183 kb on - strand, within MPMX20_02175 at 2266.197 kb on + strand, within MPMX20_02175 at 2266.209 kb on + strand, within MPMX20_02175 at 2266.292 kb on + strand, within MPMX20_02175 at 2266.302 kb on + strand, within MPMX20_02175 at 2266.324 kb on + strand, within MPMX20_02175 at 2266.326 kb on + strand, within MPMX20_02175 at 2266.334 kb on - strand, within MPMX20_02175 at 2266.334 kb on - strand, within MPMX20_02175 at 2266.334 kb on - strand, within MPMX20_02175 at 2266.334 kb on - strand, within MPMX20_02175 at 2266.420 kb on - strand, within MPMX20_02175 at 2266.440 kb on + strand, within MPMX20_02175 at 2266.478 kb on + strand, within MPMX20_02175 at 2266.515 kb on + strand, within MPMX20_02175 at 2266.549 kb on + strand, within MPMX20_02175 at 2266.571 kb on - strand, within MPMX20_02175 at 2266.591 kb on + strand, within MPMX20_02175 at 2266.630 kb on - strand, within MPMX20_02175 at 2266.680 kb on - strand, within MPMX20_02175 at 2266.695 kb on - strand, within MPMX20_02175 at 2266.731 kb on - strand, within MPMX20_02175 at 2266.740 kb on + strand, within MPMX20_02175 at 2266.740 kb on + strand, within MPMX20_02175 at 2266.748 kb on - strand, within MPMX20_02175 at 2266.753 kb on - strand, within MPMX20_02175 at 2266.818 kb on + strand, within MPMX20_02175 at 2266.835 kb on + strand, within MPMX20_02175 at 2266.843 kb on - strand, within MPMX20_02175 at 2266.998 kb on + strand at 2267.006 kb on + strand at 2267.006 kb on + strand at 2267.006 kb on + strand at 2267.006 kb on + strand at 2267.006 kb on + strand at 2267.006 kb on + strand at 2267.006 kb on + strand at 2267.014 kb on - strand at 2267.014 kb on - strand at 2267.014 kb on - strand at 2267.014 kb on - strand at 2267.025 kb on - strand at 2267.073 kb on - strand, within MPMX20_02176 at 2267.111 kb on + strand, within MPMX20_02176 at 2267.186 kb on + strand, within MPMX20_02176 at 2267.194 kb on - strand, within MPMX20_02176 at 2267.298 kb on + strand, within MPMX20_02176 at 2267.305 kb on - strand, within MPMX20_02176 at 2267.306 kb on - strand, within MPMX20_02176 at 2267.306 kb on - strand, within MPMX20_02176 at 2267.650 kb on + strand at 2267.666 kb on + strand at 2267.681 kb on - strand at 2267.683 kb on - strand at 2267.786 kb on - strand at 2267.786 kb on - strand at 2267.809 kb on - strand at 2267.811 kb on + strand at 2267.811 kb on + strand at 2267.811 kb on + strand at 2267.811 kb on + strand at 2267.819 kb on - strand at 2267.819 kb on - strand at 2267.819 kb on - strand at 2267.849 kb on + strand, within MPMX20_02177 at 2267.888 kb on - strand, within MPMX20_02177 at 2267.910 kb on - strand, within MPMX20_02177 at 2267.934 kb on + strand, within MPMX20_02177 at 2267.967 kb on + strand, within MPMX20_02177 at 2267.975 kb on - strand, within MPMX20_02177 at 2268.002 kb on + strand, within MPMX20_02177 at 2268.010 kb on - strand, within MPMX20_02177 at 2268.039 kb on + strand, within MPMX20_02177 at 2268.169 kb on + strand, within MPMX20_02177 at 2268.296 kb on + strand, within MPMX20_02177 at 2268.370 kb on + strand, within MPMX20_02177 at 2268.414 kb on - strand, within MPMX20_02177 at 2268.432 kb on + strand, within MPMX20_02177 at 2268.433 kb on - strand, within MPMX20_02177 at 2268.452 kb on + strand, within MPMX20_02177 at 2268.468 kb on - strand, within MPMX20_02177 at 2268.474 kb on + strand, within MPMX20_02177 at 2268.489 kb on + strand, within MPMX20_02177 at 2268.497 kb on - strand, within MPMX20_02177 at 2268.502 kb on + strand, within MPMX20_02177 at 2268.540 kb on + strand, within MPMX20_02177 at 2268.541 kb on - strand, within MPMX20_02177 at 2268.541 kb on - strand, within MPMX20_02177 at 2268.566 kb on + strand, within MPMX20_02177 at 2268.581 kb on + strand, within MPMX20_02177 at 2268.587 kb on + strand, within MPMX20_02177 at 2268.602 kb on + strand, within MPMX20_02177 at 2268.612 kb on + strand, within MPMX20_02177 at 2268.636 kb on + strand, within MPMX20_02177
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 2,265,988 + MPMX20_02175 0.21 -2.8 2,266,059 - MPMX20_02175 0.27 +0.5 2,266,183 - MPMX20_02175 0.37 -2.1 2,266,197 + MPMX20_02175 0.38 -4.1 2,266,209 + MPMX20_02175 0.39 +2.1 2,266,292 + MPMX20_02175 0.45 -0.3 2,266,302 + MPMX20_02175 0.46 -1.3 2,266,324 + MPMX20_02175 0.48 +1.2 2,266,326 + MPMX20_02175 0.48 -2.5 2,266,334 - MPMX20_02175 0.49 +1.5 2,266,334 - MPMX20_02175 0.49 +0.4 2,266,334 - MPMX20_02175 0.49 +2.9 2,266,334 - MPMX20_02175 0.49 +2.3 2,266,420 - MPMX20_02175 0.55 -0.9 2,266,440 + MPMX20_02175 0.57 -0.2 2,266,478 + MPMX20_02175 0.60 +0.6 2,266,515 + MPMX20_02175 0.63 +2.6 2,266,549 + MPMX20_02175 0.66 -2.2 2,266,571 - MPMX20_02175 0.67 +0.7 2,266,591 + MPMX20_02175 0.69 +2.6 2,266,630 - MPMX20_02175 0.72 +0.1 2,266,680 - MPMX20_02175 0.76 +1.4 2,266,695 - MPMX20_02175 0.77 -1.3 2,266,731 - MPMX20_02175 0.80 -3.5 2,266,740 + MPMX20_02175 0.81 +2.3 2,266,740 + MPMX20_02175 0.81 +1.3 2,266,748 - MPMX20_02175 0.82 +4.7 2,266,753 - MPMX20_02175 0.82 -0.5 2,266,818 + MPMX20_02175 0.87 -1.5 2,266,835 + MPMX20_02175 0.88 -0.3 2,266,843 - MPMX20_02175 0.89 -3.7 2,266,998 + +1.5 2,267,006 + +1.6 2,267,006 + -1.4 2,267,006 + -3.5 2,267,006 + -2.8 2,267,006 + +0.1 2,267,006 + -0.9 2,267,006 + -0.0 2,267,014 - -2.6 2,267,014 - -2.5 2,267,014 - +3.0 2,267,014 - +1.7 2,267,025 - +2.5 2,267,073 - MPMX20_02176 0.13 -0.7 2,267,111 + MPMX20_02176 0.18 +0.0 2,267,186 + MPMX20_02176 0.28 +3.1 2,267,194 - MPMX20_02176 0.29 -1.0 2,267,298 + MPMX20_02176 0.44 +0.5 2,267,305 - MPMX20_02176 0.45 +2.7 2,267,306 - MPMX20_02176 0.45 -1.9 2,267,306 - MPMX20_02176 0.45 +1.3 2,267,650 + +2.9 2,267,666 + +1.7 2,267,681 - -3.8 2,267,683 - -0.7 2,267,786 - +1.9 2,267,786 - -3.1 2,267,809 - +0.1 2,267,811 + +2.1 2,267,811 + +0.9 2,267,811 + +1.8 2,267,811 + -3.1 2,267,819 - -0.5 2,267,819 - +2.8 2,267,819 - +1.7 2,267,849 + MPMX20_02177 0.12 +1.2 2,267,888 - MPMX20_02177 0.15 -0.5 2,267,910 - MPMX20_02177 0.17 +3.3 2,267,934 + MPMX20_02177 0.19 -0.3 2,267,967 + MPMX20_02177 0.22 +1.1 2,267,975 - MPMX20_02177 0.22 -0.3 2,268,002 + MPMX20_02177 0.25 +1.1 2,268,010 - MPMX20_02177 0.25 +0.1 2,268,039 + MPMX20_02177 0.28 -2.1 2,268,169 + MPMX20_02177 0.38 -1.9 2,268,296 + MPMX20_02177 0.49 -1.3 2,268,370 + MPMX20_02177 0.55 -2.6 2,268,414 - MPMX20_02177 0.58 -2.1 2,268,432 + MPMX20_02177 0.60 +0.2 2,268,433 - MPMX20_02177 0.60 +1.3 2,268,452 + MPMX20_02177 0.62 -3.5 2,268,468 - MPMX20_02177 0.63 +1.4 2,268,474 + MPMX20_02177 0.63 +0.0 2,268,489 + MPMX20_02177 0.65 +1.1 2,268,497 - MPMX20_02177 0.65 +0.4 2,268,502 + MPMX20_02177 0.66 -2.5 2,268,540 + MPMX20_02177 0.69 -1.3 2,268,541 - MPMX20_02177 0.69 -3.1 2,268,541 - MPMX20_02177 0.69 +1.2 2,268,566 + MPMX20_02177 0.71 -1.3 2,268,581 + MPMX20_02177 0.72 +1.9 2,268,587 + MPMX20_02177 0.73 -2.4 2,268,602 + MPMX20_02177 0.74 -1.3 2,268,612 + MPMX20_02177 0.75 -3.6 2,268,636 + MPMX20_02177 0.77 +3.5
Or see this region's nucleotide sequence