Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02151

Experiment: octanoate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02149 and MPMX20_02150 overlap by 11 nucleotidesMPMX20_02150 and MPMX20_02151 overlap by 1 nucleotidesMPMX20_02151 and MPMX20_02152 are separated by 26 nucleotides MPMX20_02149: MPMX20_02149 - 3-hydroxyadipyl-CoA dehydrogenase, at 2,241,010 to 2,242,437 _02149 MPMX20_02150: MPMX20_02150 - Acyl-coenzyme A thioesterase PaaI, at 2,242,427 to 2,242,849 _02150 MPMX20_02151: MPMX20_02151 - 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase, at 2,242,849 to 2,244,054 _02151 MPMX20_02152: MPMX20_02152 - Phenylacetate-coenzyme A ligase, at 2,244,081 to 2,245,397 _02152 Position (kb) 2242 2243 2244 2245Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 2241.869 kb on + strand, within MPMX20_02149at 2241.919 kb on - strand, within MPMX20_02149at 2242.087 kb on - strand, within MPMX20_02149at 2242.257 kb on - strand, within MPMX20_02149at 2242.307 kb on - strandat 2242.367 kb on - strandat 2242.383 kb on + strandat 2242.388 kb on + strandat 2242.419 kb on + strandat 2242.419 kb on - strandat 2242.419 kb on - strandat 2242.453 kb on - strandat 2242.634 kb on + strand, within MPMX20_02150at 2242.635 kb on + strand, within MPMX20_02150at 2242.655 kb on + strand, within MPMX20_02150at 2242.723 kb on + strand, within MPMX20_02150at 2242.731 kb on - strand, within MPMX20_02150at 2242.759 kb on - strand, within MPMX20_02150at 2242.838 kb on + strandat 2242.914 kb on - strandat 2242.937 kb on + strandat 2242.950 kb on - strandat 2243.087 kb on - strand, within MPMX20_02151at 2243.097 kb on - strand, within MPMX20_02151at 2243.120 kb on + strand, within MPMX20_02151at 2243.128 kb on - strand, within MPMX20_02151at 2243.154 kb on + strand, within MPMX20_02151at 2243.229 kb on + strand, within MPMX20_02151at 2243.237 kb on - strand, within MPMX20_02151at 2243.286 kb on - strand, within MPMX20_02151at 2243.423 kb on + strand, within MPMX20_02151at 2243.526 kb on - strand, within MPMX20_02151at 2243.548 kb on - strand, within MPMX20_02151at 2243.606 kb on + strand, within MPMX20_02151at 2243.606 kb on + strand, within MPMX20_02151at 2243.614 kb on - strand, within MPMX20_02151at 2243.666 kb on + strand, within MPMX20_02151at 2243.672 kb on + strand, within MPMX20_02151at 2243.680 kb on - strand, within MPMX20_02151at 2243.733 kb on - strand, within MPMX20_02151at 2243.743 kb on - strand, within MPMX20_02151at 2243.743 kb on - strand, within MPMX20_02151at 2243.804 kb on + strand, within MPMX20_02151at 2243.883 kb on + strand, within MPMX20_02151at 2243.941 kb on + strandat 2243.946 kb on + strandat 2243.987 kb on + strandat 2244.002 kb on - strandat 2244.005 kb on - strandat 2244.006 kb on + strandat 2244.006 kb on + strandat 2244.013 kb on + strandat 2244.019 kb on + strandat 2244.019 kb on + strandat 2244.019 kb on + strandat 2244.019 kb on + strandat 2244.027 kb on - strandat 2244.027 kb on - strandat 2244.027 kb on - strandat 2244.105 kb on - strandat 2244.130 kb on + strandat 2244.170 kb on + strandat 2244.178 kb on - strandat 2244.229 kb on + strand, within MPMX20_02152at 2244.277 kb on + strand, within MPMX20_02152at 2244.283 kb on + strand, within MPMX20_02152at 2244.283 kb on + strand, within MPMX20_02152at 2244.285 kb on - strand, within MPMX20_02152at 2244.285 kb on - strand, within MPMX20_02152at 2244.285 kb on - strand, within MPMX20_02152at 2244.290 kb on - strand, within MPMX20_02152at 2244.291 kb on - strand, within MPMX20_02152at 2244.291 kb on - strand, within MPMX20_02152at 2244.346 kb on - strand, within MPMX20_02152at 2244.348 kb on + strand, within MPMX20_02152at 2244.367 kb on + strand, within MPMX20_02152at 2244.377 kb on + strand, within MPMX20_02152at 2244.391 kb on + strand, within MPMX20_02152at 2244.418 kb on + strand, within MPMX20_02152at 2244.439 kb on - strand, within MPMX20_02152at 2244.508 kb on - strand, within MPMX20_02152at 2244.508 kb on - strand, within MPMX20_02152at 2244.524 kb on + strand, within MPMX20_02152at 2244.643 kb on + strand, within MPMX20_02152at 2244.674 kb on + strand, within MPMX20_02152at 2244.806 kb on + strand, within MPMX20_02152at 2244.947 kb on - strand, within MPMX20_02152at 2244.949 kb on - strand, within MPMX20_02152at 2244.956 kb on + strand, within MPMX20_02152at 2244.964 kb on - strand, within MPMX20_02152at 2244.999 kb on - strand, within MPMX20_02152at 2245.021 kb on - strand, within MPMX20_02152at 2245.021 kb on - strand, within MPMX20_02152

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Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
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2,241,869 + MPMX20_02149 0.60 -2.2
2,241,919 - MPMX20_02149 0.64 -4.2
2,242,087 - MPMX20_02149 0.75 +2.1
2,242,257 - MPMX20_02149 0.87 -0.1
2,242,307 - +0.7
2,242,367 - +1.3
2,242,383 + -1.7
2,242,388 + +1.0
2,242,419 + -1.5
2,242,419 - -1.1
2,242,419 - +2.8
2,242,453 - -1.1
2,242,634 + MPMX20_02150 0.49 -3.4
2,242,635 + MPMX20_02150 0.49 -0.3
2,242,655 + MPMX20_02150 0.54 -3.5
2,242,723 + MPMX20_02150 0.70 +0.1
2,242,731 - MPMX20_02150 0.72 -2.0
2,242,759 - MPMX20_02150 0.78 -0.6
2,242,838 + -0.5
2,242,914 - -1.6
2,242,937 + -2.3
2,242,950 - +2.0
2,243,087 - MPMX20_02151 0.20 -2.8
2,243,097 - MPMX20_02151 0.21 -2.9
2,243,120 + MPMX20_02151 0.22 +0.8
2,243,128 - MPMX20_02151 0.23 +0.5
2,243,154 + MPMX20_02151 0.25 +3.0
2,243,229 + MPMX20_02151 0.32 +2.1
2,243,237 - MPMX20_02151 0.32 -1.6
2,243,286 - MPMX20_02151 0.36 -1.4
2,243,423 + MPMX20_02151 0.48 +0.7
2,243,526 - MPMX20_02151 0.56 +2.8
2,243,548 - MPMX20_02151 0.58 -0.9
2,243,606 + MPMX20_02151 0.63 -2.5
2,243,606 + MPMX20_02151 0.63 -1.1
2,243,614 - MPMX20_02151 0.63 +1.0
2,243,666 + MPMX20_02151 0.68 -0.3
2,243,672 + MPMX20_02151 0.68 +0.6
2,243,680 - MPMX20_02151 0.69 +0.1
2,243,733 - MPMX20_02151 0.73 +1.6
2,243,743 - MPMX20_02151 0.74 -1.4
2,243,743 - MPMX20_02151 0.74 -1.3
2,243,804 + MPMX20_02151 0.79 -2.5
2,243,883 + MPMX20_02151 0.86 -1.6
2,243,941 + -1.5
2,243,946 + +0.1
2,243,987 + +2.4
2,244,002 - +0.2
2,244,005 - -1.6
2,244,006 + -3.9
2,244,006 + -2.5
2,244,013 + +0.2
2,244,019 + +1.9
2,244,019 + -3.3
2,244,019 + +1.2
2,244,019 + -1.1
2,244,027 - +0.7
2,244,027 - -1.3
2,244,027 - -3.1
2,244,105 - -1.5
2,244,130 + +0.8
2,244,170 + +0.9
2,244,178 - -2.9
2,244,229 + MPMX20_02152 0.11 -1.4
2,244,277 + MPMX20_02152 0.15 +0.2
2,244,283 + MPMX20_02152 0.15 +0.1
2,244,283 + MPMX20_02152 0.15 -3.5
2,244,285 - MPMX20_02152 0.15 +0.5
2,244,285 - MPMX20_02152 0.15 -3.8
2,244,285 - MPMX20_02152 0.15 +2.5
2,244,290 - MPMX20_02152 0.16 +1.1
2,244,291 - MPMX20_02152 0.16 +1.0
2,244,291 - MPMX20_02152 0.16 -1.9
2,244,346 - MPMX20_02152 0.20 -0.8
2,244,348 + MPMX20_02152 0.20 +0.9
2,244,367 + MPMX20_02152 0.22 -0.4
2,244,377 + MPMX20_02152 0.22 +1.3
2,244,391 + MPMX20_02152 0.24 +0.9
2,244,418 + MPMX20_02152 0.26 -2.7
2,244,439 - MPMX20_02152 0.27 -2.2
2,244,508 - MPMX20_02152 0.32 -1.9
2,244,508 - MPMX20_02152 0.32 -3.1
2,244,524 + MPMX20_02152 0.34 -3.0
2,244,643 + MPMX20_02152 0.43 +0.5
2,244,674 + MPMX20_02152 0.45 -3.2
2,244,806 + MPMX20_02152 0.55 +0.7
2,244,947 - MPMX20_02152 0.66 -3.4
2,244,949 - MPMX20_02152 0.66 +1.0
2,244,956 + MPMX20_02152 0.66 +0.6
2,244,964 - MPMX20_02152 0.67 +1.4
2,244,999 - MPMX20_02152 0.70 -3.4
2,245,021 - MPMX20_02152 0.71 -0.6
2,245,021 - MPMX20_02152 0.71 +3.3

Or see this region's nucleotide sequence