Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02145

Experiment: octanoate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02143 and MPMX20_02144 are separated by 8 nucleotidesMPMX20_02144 and MPMX20_02145 are separated by 14 nucleotidesMPMX20_02145 and MPMX20_02146 are separated by 7 nucleotides MPMX20_02143: MPMX20_02143 - 1,2-phenylacetyl-CoA epoxidase, subunit B, at 2,236,824 to 2,237,111 _02143 MPMX20_02144: MPMX20_02144 - 1,2-phenylacetyl-CoA epoxidase, subunit C, at 2,237,120 to 2,237,866 _02144 MPMX20_02145: MPMX20_02145 - Putative 1,2-phenylacetyl-CoA epoxidase, subunit D, at 2,237,881 to 2,238,378 _02145 MPMX20_02146: MPMX20_02146 - 1,2-phenylacetyl-CoA epoxidase, subunit E, at 2,238,386 to 2,239,456 _02146 Position (kb) 2237 2238 2239Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 2236.955 kb on - strand, within MPMX20_02143at 2236.955 kb on - strand, within MPMX20_02143at 2236.956 kb on - strand, within MPMX20_02143at 2237.028 kb on + strand, within MPMX20_02143at 2237.103 kb on - strandat 2237.105 kb on + strandat 2237.113 kb on - strandat 2237.113 kb on - strandat 2237.113 kb on - strandat 2237.293 kb on + strand, within MPMX20_02144at 2237.308 kb on - strand, within MPMX20_02144at 2237.347 kb on + strand, within MPMX20_02144at 2237.374 kb on + strand, within MPMX20_02144at 2237.413 kb on - strand, within MPMX20_02144at 2237.461 kb on - strand, within MPMX20_02144at 2237.461 kb on - strand, within MPMX20_02144at 2237.511 kb on + strand, within MPMX20_02144at 2237.568 kb on + strand, within MPMX20_02144at 2237.601 kb on + strand, within MPMX20_02144at 2237.619 kb on - strand, within MPMX20_02144at 2237.624 kb on - strand, within MPMX20_02144at 2237.626 kb on + strand, within MPMX20_02144at 2237.683 kb on - strand, within MPMX20_02144at 2237.716 kb on + strand, within MPMX20_02144at 2237.746 kb on - strand, within MPMX20_02144at 2237.776 kb on + strand, within MPMX20_02144at 2237.816 kb on - strandat 2237.816 kb on - strandat 2237.840 kb on - strandat 2237.870 kb on - strandat 2237.875 kb on - strandat 2237.875 kb on - strandat 2237.880 kb on - strandat 2237.965 kb on + strand, within MPMX20_02145at 2238.012 kb on + strand, within MPMX20_02145at 2238.012 kb on + strand, within MPMX20_02145at 2238.012 kb on + strand, within MPMX20_02145at 2238.040 kb on - strand, within MPMX20_02145at 2238.054 kb on - strand, within MPMX20_02145at 2238.110 kb on + strand, within MPMX20_02145at 2238.110 kb on + strand, within MPMX20_02145at 2238.110 kb on + strand, within MPMX20_02145at 2238.138 kb on + strand, within MPMX20_02145at 2238.164 kb on + strand, within MPMX20_02145at 2238.225 kb on + strand, within MPMX20_02145at 2238.278 kb on + strand, within MPMX20_02145at 2238.344 kb on + strandat 2238.390 kb on - strandat 2238.390 kb on - strandat 2238.463 kb on + strandat 2238.463 kb on + strandat 2238.471 kb on - strandat 2238.506 kb on + strand, within MPMX20_02146at 2238.570 kb on + strand, within MPMX20_02146at 2238.589 kb on - strand, within MPMX20_02146at 2238.594 kb on - strand, within MPMX20_02146at 2238.669 kb on + strand, within MPMX20_02146at 2238.753 kb on + strand, within MPMX20_02146at 2238.759 kb on + strand, within MPMX20_02146at 2238.792 kb on + strand, within MPMX20_02146at 2238.820 kb on + strand, within MPMX20_02146at 2238.820 kb on + strand, within MPMX20_02146at 2238.828 kb on - strand, within MPMX20_02146at 2238.844 kb on + strand, within MPMX20_02146at 2238.921 kb on + strand, within MPMX20_02146at 2238.921 kb on + strand, within MPMX20_02146at 2238.929 kb on + strand, within MPMX20_02146at 2238.929 kb on - strand, within MPMX20_02146at 2239.024 kb on - strand, within MPMX20_02146at 2239.030 kb on - strand, within MPMX20_02146at 2239.076 kb on + strand, within MPMX20_02146at 2239.130 kb on - strand, within MPMX20_02146at 2239.278 kb on - strand, within MPMX20_02146at 2239.278 kb on - strand, within MPMX20_02146at 2239.298 kb on - strand, within MPMX20_02146at 2239.353 kb on + strandat 2239.353 kb on + strandat 2239.361 kb on - strandat 2239.361 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
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2,236,955 - MPMX20_02143 0.45 +2.1
2,236,955 - MPMX20_02143 0.45 +1.3
2,236,956 - MPMX20_02143 0.46 -3.6
2,237,028 + MPMX20_02143 0.71 -2.5
2,237,103 - +1.1
2,237,105 + -1.5
2,237,113 - -0.9
2,237,113 - -3.4
2,237,113 - +1.2
2,237,293 + MPMX20_02144 0.23 -3.1
2,237,308 - MPMX20_02144 0.25 -2.8
2,237,347 + MPMX20_02144 0.30 -1.7
2,237,374 + MPMX20_02144 0.34 -2.0
2,237,413 - MPMX20_02144 0.39 -3.2
2,237,461 - MPMX20_02144 0.46 -1.5
2,237,461 - MPMX20_02144 0.46 -2.7
2,237,511 + MPMX20_02144 0.52 -2.6
2,237,568 + MPMX20_02144 0.60 +1.7
2,237,601 + MPMX20_02144 0.64 -1.7
2,237,619 - MPMX20_02144 0.67 -1.0
2,237,624 - MPMX20_02144 0.67 -0.1
2,237,626 + MPMX20_02144 0.68 +0.3
2,237,683 - MPMX20_02144 0.75 +0.1
2,237,716 + MPMX20_02144 0.80 +3.0
2,237,746 - MPMX20_02144 0.84 +1.4
2,237,776 + MPMX20_02144 0.88 -0.9
2,237,816 - +0.1
2,237,816 - -2.1
2,237,840 - +0.6
2,237,870 - -0.6
2,237,875 - +1.9
2,237,875 - -1.3
2,237,880 - -1.4
2,237,965 + MPMX20_02145 0.17 -3.1
2,238,012 + MPMX20_02145 0.26 -4.0
2,238,012 + MPMX20_02145 0.26 -3.0
2,238,012 + MPMX20_02145 0.26 -2.8
2,238,040 - MPMX20_02145 0.32 -3.3
2,238,054 - MPMX20_02145 0.35 -3.6
2,238,110 + MPMX20_02145 0.46 -0.3
2,238,110 + MPMX20_02145 0.46 +0.7
2,238,110 + MPMX20_02145 0.46 -2.5
2,238,138 + MPMX20_02145 0.52 -1.6
2,238,164 + MPMX20_02145 0.57 +2.4
2,238,225 + MPMX20_02145 0.69 +0.1
2,238,278 + MPMX20_02145 0.80 -1.6
2,238,344 + -0.3
2,238,390 - +1.7
2,238,390 - -3.0
2,238,463 + -1.4
2,238,463 + +0.6
2,238,471 - -0.3
2,238,506 + MPMX20_02146 0.11 +0.9
2,238,570 + MPMX20_02146 0.17 +2.2
2,238,589 - MPMX20_02146 0.19 -0.1
2,238,594 - MPMX20_02146 0.19 -2.7
2,238,669 + MPMX20_02146 0.26 +2.2
2,238,753 + MPMX20_02146 0.34 -2.8
2,238,759 + MPMX20_02146 0.35 -3.5
2,238,792 + MPMX20_02146 0.38 -2.5
2,238,820 + MPMX20_02146 0.41 +2.6
2,238,820 + MPMX20_02146 0.41 -3.1
2,238,828 - MPMX20_02146 0.41 +0.5
2,238,844 + MPMX20_02146 0.43 +1.5
2,238,921 + MPMX20_02146 0.50 -3.9
2,238,921 + MPMX20_02146 0.50 -2.0
2,238,929 + MPMX20_02146 0.51 -3.7
2,238,929 - MPMX20_02146 0.51 -3.1
2,239,024 - MPMX20_02146 0.60 -0.7
2,239,030 - MPMX20_02146 0.60 +2.0
2,239,076 + MPMX20_02146 0.64 -2.5
2,239,130 - MPMX20_02146 0.69 +0.5
2,239,278 - MPMX20_02146 0.83 -1.1
2,239,278 - MPMX20_02146 0.83 +1.8
2,239,298 - MPMX20_02146 0.85 +1.5
2,239,353 + -1.7
2,239,353 + -1.6
2,239,361 - +2.6
2,239,361 - -0.5

Or see this region's nucleotide sequence