Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01961

Experiment: octanoate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01959 and MPMX20_01960 overlap by 17 nucleotidesMPMX20_01960 and MPMX20_01961 overlap by 1 nucleotidesMPMX20_01961 and MPMX20_01962 are separated by 1 nucleotides MPMX20_01959: MPMX20_01959 - putative glutamine ABC transporter permease protein GlnP, at 2,054,025 to 2,054,711 _01959 MPMX20_01960: MPMX20_01960 - Glutamate/aspartate import permease protein GltJ, at 2,054,695 to 2,055,441 _01960 MPMX20_01961: MPMX20_01961 - Glutamine transport ATP-binding protein GlnQ, at 2,055,441 to 2,056,256 _01961 MPMX20_01962: MPMX20_01962 - ABC transporter glutamine-binding protein GlnH, at 2,056,258 to 2,057,088 _01962 Position (kb) 2055 2056 2057Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 2054.481 kb on + strand, within MPMX20_01959at 2054.507 kb on - strand, within MPMX20_01959at 2054.561 kb on - strand, within MPMX20_01959at 2054.562 kb on + strand, within MPMX20_01959at 2054.585 kb on + strand, within MPMX20_01959at 2054.586 kb on + strand, within MPMX20_01959at 2054.593 kb on - strand, within MPMX20_01959at 2054.593 kb on - strand, within MPMX20_01959at 2054.632 kb on + strand, within MPMX20_01959at 2054.648 kb on - strandat 2054.656 kb on + strandat 2054.667 kb on - strandat 2054.693 kb on + strandat 2054.761 kb on - strandat 2054.763 kb on + strandat 2054.779 kb on + strand, within MPMX20_01960at 2054.787 kb on - strand, within MPMX20_01960at 2054.933 kb on + strand, within MPMX20_01960at 2055.024 kb on + strand, within MPMX20_01960at 2055.034 kb on - strand, within MPMX20_01960at 2055.073 kb on + strand, within MPMX20_01960at 2055.138 kb on + strand, within MPMX20_01960at 2055.178 kb on + strand, within MPMX20_01960at 2055.209 kb on + strand, within MPMX20_01960at 2055.224 kb on + strand, within MPMX20_01960at 2055.263 kb on - strand, within MPMX20_01960at 2055.333 kb on - strand, within MPMX20_01960at 2055.429 kb on - strandat 2055.449 kb on + strandat 2055.628 kb on + strand, within MPMX20_01961at 2055.665 kb on - strand, within MPMX20_01961at 2055.670 kb on - strand, within MPMX20_01961at 2055.727 kb on + strand, within MPMX20_01961at 2055.735 kb on - strand, within MPMX20_01961at 2055.787 kb on + strand, within MPMX20_01961at 2055.843 kb on + strand, within MPMX20_01961at 2055.843 kb on + strand, within MPMX20_01961at 2055.851 kb on - strand, within MPMX20_01961at 2055.851 kb on - strand, within MPMX20_01961at 2055.979 kb on + strand, within MPMX20_01961at 2056.028 kb on + strand, within MPMX20_01961at 2056.064 kb on + strand, within MPMX20_01961at 2056.064 kb on + strand, within MPMX20_01961at 2056.067 kb on - strand, within MPMX20_01961at 2056.106 kb on - strand, within MPMX20_01961at 2056.115 kb on + strand, within MPMX20_01961at 2056.127 kb on + strand, within MPMX20_01961at 2056.279 kb on - strandat 2056.287 kb on + strandat 2056.287 kb on + strandat 2056.290 kb on + strandat 2056.295 kb on - strandat 2056.379 kb on + strand, within MPMX20_01962at 2056.379 kb on + strand, within MPMX20_01962at 2056.379 kb on + strand, within MPMX20_01962at 2056.379 kb on + strand, within MPMX20_01962at 2056.387 kb on - strand, within MPMX20_01962at 2056.435 kb on - strand, within MPMX20_01962at 2056.505 kb on - strand, within MPMX20_01962at 2056.505 kb on - strand, within MPMX20_01962at 2056.507 kb on + strand, within MPMX20_01962at 2056.507 kb on + strand, within MPMX20_01962at 2056.514 kb on + strand, within MPMX20_01962at 2056.515 kb on - strand, within MPMX20_01962at 2056.515 kb on - strand, within MPMX20_01962at 2056.520 kb on + strand, within MPMX20_01962at 2056.616 kb on - strand, within MPMX20_01962at 2056.662 kb on - strand, within MPMX20_01962at 2056.662 kb on - strand, within MPMX20_01962at 2056.770 kb on - strand, within MPMX20_01962at 2056.902 kb on + strand, within MPMX20_01962at 2057.008 kb on - strandat 2057.069 kb on + strandat 2057.114 kb on + strandat 2057.114 kb on + strandat 2057.114 kb on + strandat 2057.122 kb on - strandat 2057.140 kb on - strandat 2057.203 kb on + strandat 2057.250 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
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2,054,481 + MPMX20_01959 0.66 +1.0
2,054,507 - MPMX20_01959 0.70 +1.1
2,054,561 - MPMX20_01959 0.78 -1.0
2,054,562 + MPMX20_01959 0.78 +1.6
2,054,585 + MPMX20_01959 0.82 +1.2
2,054,586 + MPMX20_01959 0.82 -2.9
2,054,593 - MPMX20_01959 0.83 +0.7
2,054,593 - MPMX20_01959 0.83 -4.0
2,054,632 + MPMX20_01959 0.88 -3.0
2,054,648 - -1.3
2,054,656 + -1.8
2,054,667 - -0.5
2,054,693 + +1.0
2,054,761 - -1.9
2,054,763 + -2.9
2,054,779 + MPMX20_01960 0.11 -2.2
2,054,787 - MPMX20_01960 0.12 -1.9
2,054,933 + MPMX20_01960 0.32 -2.3
2,055,024 + MPMX20_01960 0.44 -2.1
2,055,034 - MPMX20_01960 0.45 -1.9
2,055,073 + MPMX20_01960 0.51 -2.3
2,055,138 + MPMX20_01960 0.59 -2.2
2,055,178 + MPMX20_01960 0.65 +1.8
2,055,209 + MPMX20_01960 0.69 -0.1
2,055,224 + MPMX20_01960 0.71 -3.3
2,055,263 - MPMX20_01960 0.76 +1.4
2,055,333 - MPMX20_01960 0.85 -3.6
2,055,429 - +0.7
2,055,449 + -0.1
2,055,628 + MPMX20_01961 0.23 +2.5
2,055,665 - MPMX20_01961 0.27 +3.1
2,055,670 - MPMX20_01961 0.28 +1.7
2,055,727 + MPMX20_01961 0.35 +1.2
2,055,735 - MPMX20_01961 0.36 -1.6
2,055,787 + MPMX20_01961 0.42 +0.6
2,055,843 + MPMX20_01961 0.49 +2.6
2,055,843 + MPMX20_01961 0.49 -1.0
2,055,851 - MPMX20_01961 0.50 +1.2
2,055,851 - MPMX20_01961 0.50 +1.0
2,055,979 + MPMX20_01961 0.66 +0.5
2,056,028 + MPMX20_01961 0.72 -1.8
2,056,064 + MPMX20_01961 0.76 -0.5
2,056,064 + MPMX20_01961 0.76 -2.9
2,056,067 - MPMX20_01961 0.77 +1.4
2,056,106 - MPMX20_01961 0.81 +0.8
2,056,115 + MPMX20_01961 0.83 +1.1
2,056,127 + MPMX20_01961 0.84 -2.9
2,056,279 - -2.5
2,056,287 + +0.5
2,056,287 + +2.3
2,056,290 + +1.2
2,056,295 - -0.8
2,056,379 + MPMX20_01962 0.15 -2.5
2,056,379 + MPMX20_01962 0.15 +3.0
2,056,379 + MPMX20_01962 0.15 +1.0
2,056,379 + MPMX20_01962 0.15 -4.0
2,056,387 - MPMX20_01962 0.16 -0.5
2,056,435 - MPMX20_01962 0.21 +0.6
2,056,505 - MPMX20_01962 0.30 +0.7
2,056,505 - MPMX20_01962 0.30 +2.2
2,056,507 + MPMX20_01962 0.30 +1.4
2,056,507 + MPMX20_01962 0.30 -0.6
2,056,514 + MPMX20_01962 0.31 -3.3
2,056,515 - MPMX20_01962 0.31 -1.9
2,056,515 - MPMX20_01962 0.31 -0.8
2,056,520 + MPMX20_01962 0.32 +0.7
2,056,616 - MPMX20_01962 0.43 -2.3
2,056,662 - MPMX20_01962 0.49 -2.2
2,056,662 - MPMX20_01962 0.49 +1.0
2,056,770 - MPMX20_01962 0.62 -2.0
2,056,902 + MPMX20_01962 0.77 -3.4
2,057,008 - +1.3
2,057,069 + -2.4
2,057,114 + -2.9
2,057,114 + -0.1
2,057,114 + +2.9
2,057,122 - +0.6
2,057,140 - -1.1
2,057,203 + +0.7
2,057,250 + +1.4

Or see this region's nucleotide sequence