Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01955

Experiment: octanoate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01954 and MPMX20_01955 are separated by 399 nucleotidesMPMX20_01955 and MPMX20_01956 overlap by 8 nucleotidesMPMX20_01956 and MPMX20_01957 are separated by 28 nucleotides MPMX20_01954: MPMX20_01954 - Putative cystathionine beta-synthase, at 2,049,432 to 2,050,802 _01954 MPMX20_01955: MPMX20_01955 - Methionine import ATP-binding protein MetN, at 2,051,202 to 2,052,224 _01955 MPMX20_01956: MPMX20_01956 - Methionine import system permease protein MetP, at 2,052,217 to 2,052,885 _01956 MPMX20_01957: MPMX20_01957 - Methionine-binding lipoprotein MetQ, at 2,052,914 to 2,053,726 _01957 Position (kb) 2051 2052 2053Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 2050.313 kb on + strand, within MPMX20_01954at 2050.321 kb on - strand, within MPMX20_01954at 2050.321 kb on - strand, within MPMX20_01954at 2050.321 kb on - strand, within MPMX20_01954at 2050.365 kb on - strand, within MPMX20_01954at 2050.389 kb on - strand, within MPMX20_01954at 2050.430 kb on - strand, within MPMX20_01954at 2050.440 kb on - strand, within MPMX20_01954at 2050.440 kb on - strand, within MPMX20_01954at 2050.458 kb on + strand, within MPMX20_01954at 2050.458 kb on + strand, within MPMX20_01954at 2050.458 kb on + strand, within MPMX20_01954at 2050.458 kb on + strand, within MPMX20_01954at 2050.458 kb on + strand, within MPMX20_01954at 2050.458 kb on + strand, within MPMX20_01954at 2050.466 kb on - strand, within MPMX20_01954at 2050.466 kb on - strand, within MPMX20_01954at 2050.466 kb on - strand, within MPMX20_01954at 2050.466 kb on - strand, within MPMX20_01954at 2050.466 kb on - strand, within MPMX20_01954at 2050.560 kb on + strand, within MPMX20_01954at 2050.579 kb on - strand, within MPMX20_01954at 2050.579 kb on - strand, within MPMX20_01954at 2050.626 kb on - strand, within MPMX20_01954at 2050.669 kb on - strandat 2050.760 kb on + strandat 2050.760 kb on - strandat 2050.821 kb on + strandat 2050.821 kb on + strandat 2050.829 kb on - strandat 2050.964 kb on - strandat 2051.014 kb on + strandat 2051.014 kb on + strandat 2051.022 kb on - strandat 2051.022 kb on - strandat 2051.203 kb on + strandat 2051.237 kb on - strandat 2051.248 kb on - strandat 2051.267 kb on - strandat 2051.286 kb on + strandat 2051.287 kb on + strandat 2051.420 kb on + strand, within MPMX20_01955at 2051.420 kb on + strand, within MPMX20_01955at 2051.427 kb on + strand, within MPMX20_01955at 2051.427 kb on + strand, within MPMX20_01955at 2051.478 kb on - strand, within MPMX20_01955at 2051.614 kb on + strand, within MPMX20_01955at 2051.621 kb on + strand, within MPMX20_01955at 2051.644 kb on + strand, within MPMX20_01955at 2051.645 kb on + strand, within MPMX20_01955at 2051.653 kb on - strand, within MPMX20_01955at 2051.690 kb on - strand, within MPMX20_01955at 2051.725 kb on + strand, within MPMX20_01955at 2051.733 kb on - strand, within MPMX20_01955at 2051.747 kb on + strand, within MPMX20_01955at 2051.775 kb on - strand, within MPMX20_01955at 2051.965 kb on - strand, within MPMX20_01955at 2052.008 kb on - strand, within MPMX20_01955at 2052.017 kb on + strand, within MPMX20_01955at 2052.025 kb on + strand, within MPMX20_01955at 2052.033 kb on - strand, within MPMX20_01955at 2052.033 kb on - strand, within MPMX20_01955at 2052.033 kb on - strand, within MPMX20_01955at 2052.033 kb on - strand, within MPMX20_01955at 2052.125 kb on + strandat 2052.130 kb on + strandat 2052.156 kb on + strandat 2052.172 kb on + strandat 2052.238 kb on + strandat 2052.255 kb on + strandat 2052.282 kb on + strandat 2052.282 kb on + strandat 2052.290 kb on - strand, within MPMX20_01956at 2052.319 kb on - strand, within MPMX20_01956at 2052.329 kb on + strand, within MPMX20_01956at 2052.329 kb on + strand, within MPMX20_01956at 2052.353 kb on - strand, within MPMX20_01956at 2052.353 kb on - strand, within MPMX20_01956at 2052.353 kb on - strand, within MPMX20_01956at 2052.461 kb on - strand, within MPMX20_01956at 2052.482 kb on + strand, within MPMX20_01956at 2052.532 kb on + strand, within MPMX20_01956at 2052.601 kb on + strand, within MPMX20_01956at 2052.626 kb on - strand, within MPMX20_01956at 2052.634 kb on - strand, within MPMX20_01956at 2052.654 kb on + strand, within MPMX20_01956at 2052.662 kb on - strand, within MPMX20_01956at 2052.667 kb on - strand, within MPMX20_01956at 2052.669 kb on + strand, within MPMX20_01956at 2052.669 kb on + strand, within MPMX20_01956at 2052.677 kb on - strand, within MPMX20_01956at 2052.720 kb on + strand, within MPMX20_01956at 2052.791 kb on + strand, within MPMX20_01956at 2052.815 kb on + strand, within MPMX20_01956at 2052.838 kb on + strandat 2052.846 kb on - strandat 2052.846 kb on - strandat 2052.856 kb on + strandat 2052.856 kb on + strandat 2052.856 kb on + strandat 2052.856 kb on + strandat 2052.863 kb on - strandat 2052.864 kb on - strandat 2052.864 kb on - strandat 2052.864 kb on - strandat 2052.864 kb on - strandat 2052.876 kb on - strandat 2052.880 kb on + strandat 2052.942 kb on + strandat 2052.942 kb on + strandat 2052.947 kb on + strandat 2052.950 kb on - strandat 2052.964 kb on - strandat 2052.964 kb on - strandat 2052.982 kb on + strandat 2052.990 kb on + strandat 2053.033 kb on + strand, within MPMX20_01957at 2053.033 kb on + strand, within MPMX20_01957at 2053.033 kb on + strand, within MPMX20_01957at 2053.033 kb on + strand, within MPMX20_01957at 2053.054 kb on + strand, within MPMX20_01957at 2053.065 kb on - strand, within MPMX20_01957at 2053.089 kb on + strand, within MPMX20_01957at 2053.099 kb on + strand, within MPMX20_01957at 2053.099 kb on + strand, within MPMX20_01957at 2053.099 kb on + strand, within MPMX20_01957at 2053.099 kb on + strand, within MPMX20_01957at 2053.107 kb on - strand, within MPMX20_01957at 2053.107 kb on - strand, within MPMX20_01957at 2053.107 kb on - strand, within MPMX20_01957at 2053.107 kb on - strand, within MPMX20_01957at 2053.112 kb on - strand, within MPMX20_01957at 2053.114 kb on + strand, within MPMX20_01957at 2053.151 kb on + strand, within MPMX20_01957at 2053.157 kb on + strand, within MPMX20_01957at 2053.203 kb on - strand, within MPMX20_01957

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Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
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2,050,313 + MPMX20_01954 0.64 -2.9
2,050,321 - MPMX20_01954 0.65 +0.4
2,050,321 - MPMX20_01954 0.65 -2.1
2,050,321 - MPMX20_01954 0.65 -0.1
2,050,365 - MPMX20_01954 0.68 -0.7
2,050,389 - MPMX20_01954 0.70 -0.8
2,050,430 - MPMX20_01954 0.73 +1.0
2,050,440 - MPMX20_01954 0.74 +1.5
2,050,440 - MPMX20_01954 0.74 +0.3
2,050,458 + MPMX20_01954 0.75 -2.3
2,050,458 + MPMX20_01954 0.75 +1.8
2,050,458 + MPMX20_01954 0.75 +3.9
2,050,458 + MPMX20_01954 0.75 +0.5
2,050,458 + MPMX20_01954 0.75 +0.5
2,050,458 + MPMX20_01954 0.75 +2.1
2,050,466 - MPMX20_01954 0.75 -2.6
2,050,466 - MPMX20_01954 0.75 -1.3
2,050,466 - MPMX20_01954 0.75 +1.0
2,050,466 - MPMX20_01954 0.75 -1.9
2,050,466 - MPMX20_01954 0.75 +0.2
2,050,560 + MPMX20_01954 0.82 +1.7
2,050,579 - MPMX20_01954 0.84 +0.4
2,050,579 - MPMX20_01954 0.84 +0.6
2,050,626 - MPMX20_01954 0.87 -0.3
2,050,669 - -2.1
2,050,760 + -2.9
2,050,760 - +2.7
2,050,821 + -0.1
2,050,821 + -2.3
2,050,829 - +1.6
2,050,964 - +4.1
2,051,014 + -0.6
2,051,014 + -0.8
2,051,022 - +1.2
2,051,022 - -0.1
2,051,203 + -2.8
2,051,237 - -1.1
2,051,248 - -2.1
2,051,267 - -3.1
2,051,286 + +2.4
2,051,287 + +2.7
2,051,420 + MPMX20_01955 0.21 +2.6
2,051,420 + MPMX20_01955 0.21 +2.3
2,051,427 + MPMX20_01955 0.22 +2.7
2,051,427 + MPMX20_01955 0.22 +1.3
2,051,478 - MPMX20_01955 0.27 +1.9
2,051,614 + MPMX20_01955 0.40 +0.6
2,051,621 + MPMX20_01955 0.41 +1.4
2,051,644 + MPMX20_01955 0.43 -1.3
2,051,645 + MPMX20_01955 0.43 +0.4
2,051,653 - MPMX20_01955 0.44 -1.0
2,051,690 - MPMX20_01955 0.48 +2.7
2,051,725 + MPMX20_01955 0.51 -0.2
2,051,733 - MPMX20_01955 0.52 -2.2
2,051,747 + MPMX20_01955 0.53 +1.2
2,051,775 - MPMX20_01955 0.56 +0.7
2,051,965 - MPMX20_01955 0.75 +0.2
2,052,008 - MPMX20_01955 0.79 -2.5
2,052,017 + MPMX20_01955 0.80 +1.7
2,052,025 + MPMX20_01955 0.80 -1.4
2,052,033 - MPMX20_01955 0.81 +0.5
2,052,033 - MPMX20_01955 0.81 +3.0
2,052,033 - MPMX20_01955 0.81 +1.9
2,052,033 - MPMX20_01955 0.81 -0.4
2,052,125 + -2.9
2,052,130 + -1.0
2,052,156 + -2.9
2,052,172 + -2.4
2,052,238 + -3.5
2,052,255 + -0.6
2,052,282 + -0.4
2,052,282 + -1.8
2,052,290 - MPMX20_01956 0.11 -3.8
2,052,319 - MPMX20_01956 0.15 +2.0
2,052,329 + MPMX20_01956 0.17 -3.1
2,052,329 + MPMX20_01956 0.17 +2.9
2,052,353 - MPMX20_01956 0.20 -0.1
2,052,353 - MPMX20_01956 0.20 +1.7
2,052,353 - MPMX20_01956 0.20 -0.5
2,052,461 - MPMX20_01956 0.36 -2.6
2,052,482 + MPMX20_01956 0.40 -3.2
2,052,532 + MPMX20_01956 0.47 -1.1
2,052,601 + MPMX20_01956 0.57 -0.4
2,052,626 - MPMX20_01956 0.61 -1.7
2,052,634 - MPMX20_01956 0.62 -0.5
2,052,654 + MPMX20_01956 0.65 +0.2
2,052,662 - MPMX20_01956 0.67 +1.9
2,052,667 - MPMX20_01956 0.67 -0.0
2,052,669 + MPMX20_01956 0.68 -2.1
2,052,669 + MPMX20_01956 0.68 +1.2
2,052,677 - MPMX20_01956 0.69 -2.8
2,052,720 + MPMX20_01956 0.75 +1.0
2,052,791 + MPMX20_01956 0.86 +1.9
2,052,815 + MPMX20_01956 0.89 +1.1
2,052,838 + +3.5
2,052,846 - +1.1
2,052,846 - +2.0
2,052,856 + +0.9
2,052,856 + +0.8
2,052,856 + +1.4
2,052,856 + +3.0
2,052,863 - +3.6
2,052,864 - +3.4
2,052,864 - -2.3
2,052,864 - +1.3
2,052,864 - -2.0
2,052,876 - -3.1
2,052,880 + +1.4
2,052,942 + -3.4
2,052,942 + +1.3
2,052,947 + +4.0
2,052,950 - +2.3
2,052,964 - +1.2
2,052,964 - -2.1
2,052,982 + -1.3
2,052,990 + -3.2
2,053,033 + MPMX20_01957 0.15 -0.4
2,053,033 + MPMX20_01957 0.15 -3.5
2,053,033 + MPMX20_01957 0.15 +1.7
2,053,033 + MPMX20_01957 0.15 -0.8
2,053,054 + MPMX20_01957 0.17 +0.8
2,053,065 - MPMX20_01957 0.19 -1.3
2,053,089 + MPMX20_01957 0.22 +0.1
2,053,099 + MPMX20_01957 0.23 -2.3
2,053,099 + MPMX20_01957 0.23 +2.5
2,053,099 + MPMX20_01957 0.23 +1.8
2,053,099 + MPMX20_01957 0.23 -3.0
2,053,107 - MPMX20_01957 0.24 -3.4
2,053,107 - MPMX20_01957 0.24 -1.4
2,053,107 - MPMX20_01957 0.24 -0.9
2,053,107 - MPMX20_01957 0.24 -3.5
2,053,112 - MPMX20_01957 0.24 -0.4
2,053,114 + MPMX20_01957 0.25 -1.9
2,053,151 + MPMX20_01957 0.29 +0.7
2,053,157 + MPMX20_01957 0.30 +2.5
2,053,203 - MPMX20_01957 0.36 +1.7

Or see this region's nucleotide sequence