Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01954 and MPMX20_01955 are separated by 399 nucleotides MPMX20_01955 and MPMX20_01956 overlap by 8 nucleotides MPMX20_01956 and MPMX20_01957 are separated by 28 nucleotides
MPMX20_01954: MPMX20_01954 - Putative cystathionine beta-synthase, at 2,049,432 to 2,050,802
_01954
MPMX20_01955: MPMX20_01955 - Methionine import ATP-binding protein MetN, at 2,051,202 to 2,052,224
_01955
MPMX20_01956: MPMX20_01956 - Methionine import system permease protein MetP, at 2,052,217 to 2,052,885
_01956
MPMX20_01957: MPMX20_01957 - Methionine-binding lipoprotein MetQ, at 2,052,914 to 2,053,726
_01957
Position (kb)
2051
2052
2053 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 2050.313 kb on + strand, within MPMX20_01954 at 2050.321 kb on - strand, within MPMX20_01954 at 2050.321 kb on - strand, within MPMX20_01954 at 2050.321 kb on - strand, within MPMX20_01954 at 2050.365 kb on - strand, within MPMX20_01954 at 2050.389 kb on - strand, within MPMX20_01954 at 2050.430 kb on - strand, within MPMX20_01954 at 2050.440 kb on - strand, within MPMX20_01954 at 2050.440 kb on - strand, within MPMX20_01954 at 2050.458 kb on + strand, within MPMX20_01954 at 2050.458 kb on + strand, within MPMX20_01954 at 2050.458 kb on + strand, within MPMX20_01954 at 2050.458 kb on + strand, within MPMX20_01954 at 2050.458 kb on + strand, within MPMX20_01954 at 2050.458 kb on + strand, within MPMX20_01954 at 2050.466 kb on - strand, within MPMX20_01954 at 2050.466 kb on - strand, within MPMX20_01954 at 2050.466 kb on - strand, within MPMX20_01954 at 2050.466 kb on - strand, within MPMX20_01954 at 2050.466 kb on - strand, within MPMX20_01954 at 2050.560 kb on + strand, within MPMX20_01954 at 2050.579 kb on - strand, within MPMX20_01954 at 2050.579 kb on - strand, within MPMX20_01954 at 2050.626 kb on - strand, within MPMX20_01954 at 2050.669 kb on - strand at 2050.760 kb on + strand at 2050.760 kb on - strand at 2050.821 kb on + strand at 2050.821 kb on + strand at 2050.829 kb on - strand at 2050.964 kb on - strand at 2051.014 kb on + strand at 2051.014 kb on + strand at 2051.022 kb on - strand at 2051.022 kb on - strand at 2051.203 kb on + strand at 2051.237 kb on - strand at 2051.248 kb on - strand at 2051.267 kb on - strand at 2051.286 kb on + strand at 2051.287 kb on + strand at 2051.420 kb on + strand, within MPMX20_01955 at 2051.420 kb on + strand, within MPMX20_01955 at 2051.427 kb on + strand, within MPMX20_01955 at 2051.427 kb on + strand, within MPMX20_01955 at 2051.478 kb on - strand, within MPMX20_01955 at 2051.614 kb on + strand, within MPMX20_01955 at 2051.621 kb on + strand, within MPMX20_01955 at 2051.644 kb on + strand, within MPMX20_01955 at 2051.645 kb on + strand, within MPMX20_01955 at 2051.653 kb on - strand, within MPMX20_01955 at 2051.690 kb on - strand, within MPMX20_01955 at 2051.725 kb on + strand, within MPMX20_01955 at 2051.733 kb on - strand, within MPMX20_01955 at 2051.747 kb on + strand, within MPMX20_01955 at 2051.775 kb on - strand, within MPMX20_01955 at 2051.965 kb on - strand, within MPMX20_01955 at 2052.008 kb on - strand, within MPMX20_01955 at 2052.017 kb on + strand, within MPMX20_01955 at 2052.025 kb on + strand, within MPMX20_01955 at 2052.033 kb on - strand, within MPMX20_01955 at 2052.033 kb on - strand, within MPMX20_01955 at 2052.033 kb on - strand, within MPMX20_01955 at 2052.033 kb on - strand, within MPMX20_01955 at 2052.125 kb on + strand at 2052.130 kb on + strand at 2052.156 kb on + strand at 2052.172 kb on + strand at 2052.238 kb on + strand at 2052.255 kb on + strand at 2052.282 kb on + strand at 2052.282 kb on + strand at 2052.290 kb on - strand, within MPMX20_01956 at 2052.319 kb on - strand, within MPMX20_01956 at 2052.329 kb on + strand, within MPMX20_01956 at 2052.329 kb on + strand, within MPMX20_01956 at 2052.353 kb on - strand, within MPMX20_01956 at 2052.353 kb on - strand, within MPMX20_01956 at 2052.353 kb on - strand, within MPMX20_01956 at 2052.461 kb on - strand, within MPMX20_01956 at 2052.482 kb on + strand, within MPMX20_01956 at 2052.532 kb on + strand, within MPMX20_01956 at 2052.601 kb on + strand, within MPMX20_01956 at 2052.626 kb on - strand, within MPMX20_01956 at 2052.634 kb on - strand, within MPMX20_01956 at 2052.654 kb on + strand, within MPMX20_01956 at 2052.662 kb on - strand, within MPMX20_01956 at 2052.667 kb on - strand, within MPMX20_01956 at 2052.669 kb on + strand, within MPMX20_01956 at 2052.669 kb on + strand, within MPMX20_01956 at 2052.677 kb on - strand, within MPMX20_01956 at 2052.720 kb on + strand, within MPMX20_01956 at 2052.791 kb on + strand, within MPMX20_01956 at 2052.815 kb on + strand, within MPMX20_01956 at 2052.838 kb on + strand at 2052.846 kb on - strand at 2052.846 kb on - strand at 2052.856 kb on + strand at 2052.856 kb on + strand at 2052.856 kb on + strand at 2052.856 kb on + strand at 2052.863 kb on - strand at 2052.864 kb on - strand at 2052.864 kb on - strand at 2052.864 kb on - strand at 2052.864 kb on - strand at 2052.876 kb on - strand at 2052.880 kb on + strand at 2052.942 kb on + strand at 2052.942 kb on + strand at 2052.947 kb on + strand at 2052.950 kb on - strand at 2052.964 kb on - strand at 2052.964 kb on - strand at 2052.982 kb on + strand at 2052.990 kb on + strand at 2053.033 kb on + strand, within MPMX20_01957 at 2053.033 kb on + strand, within MPMX20_01957 at 2053.033 kb on + strand, within MPMX20_01957 at 2053.033 kb on + strand, within MPMX20_01957 at 2053.054 kb on + strand, within MPMX20_01957 at 2053.065 kb on - strand, within MPMX20_01957 at 2053.089 kb on + strand, within MPMX20_01957 at 2053.099 kb on + strand, within MPMX20_01957 at 2053.099 kb on + strand, within MPMX20_01957 at 2053.099 kb on + strand, within MPMX20_01957 at 2053.099 kb on + strand, within MPMX20_01957 at 2053.107 kb on - strand, within MPMX20_01957 at 2053.107 kb on - strand, within MPMX20_01957 at 2053.107 kb on - strand, within MPMX20_01957 at 2053.107 kb on - strand, within MPMX20_01957 at 2053.112 kb on - strand, within MPMX20_01957 at 2053.114 kb on + strand, within MPMX20_01957 at 2053.151 kb on + strand, within MPMX20_01957 at 2053.157 kb on + strand, within MPMX20_01957 at 2053.203 kb on - strand, within MPMX20_01957
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 2,050,313 + MPMX20_01954 0.64 -2.9 2,050,321 - MPMX20_01954 0.65 +0.4 2,050,321 - MPMX20_01954 0.65 -2.1 2,050,321 - MPMX20_01954 0.65 -0.1 2,050,365 - MPMX20_01954 0.68 -0.7 2,050,389 - MPMX20_01954 0.70 -0.8 2,050,430 - MPMX20_01954 0.73 +1.0 2,050,440 - MPMX20_01954 0.74 +1.5 2,050,440 - MPMX20_01954 0.74 +0.3 2,050,458 + MPMX20_01954 0.75 -2.3 2,050,458 + MPMX20_01954 0.75 +1.8 2,050,458 + MPMX20_01954 0.75 +3.9 2,050,458 + MPMX20_01954 0.75 +0.5 2,050,458 + MPMX20_01954 0.75 +0.5 2,050,458 + MPMX20_01954 0.75 +2.1 2,050,466 - MPMX20_01954 0.75 -2.6 2,050,466 - MPMX20_01954 0.75 -1.3 2,050,466 - MPMX20_01954 0.75 +1.0 2,050,466 - MPMX20_01954 0.75 -1.9 2,050,466 - MPMX20_01954 0.75 +0.2 2,050,560 + MPMX20_01954 0.82 +1.7 2,050,579 - MPMX20_01954 0.84 +0.4 2,050,579 - MPMX20_01954 0.84 +0.6 2,050,626 - MPMX20_01954 0.87 -0.3 2,050,669 - -2.1 2,050,760 + -2.9 2,050,760 - +2.7 2,050,821 + -0.1 2,050,821 + -2.3 2,050,829 - +1.6 2,050,964 - +4.1 2,051,014 + -0.6 2,051,014 + -0.8 2,051,022 - +1.2 2,051,022 - -0.1 2,051,203 + -2.8 2,051,237 - -1.1 2,051,248 - -2.1 2,051,267 - -3.1 2,051,286 + +2.4 2,051,287 + +2.7 2,051,420 + MPMX20_01955 0.21 +2.6 2,051,420 + MPMX20_01955 0.21 +2.3 2,051,427 + MPMX20_01955 0.22 +2.7 2,051,427 + MPMX20_01955 0.22 +1.3 2,051,478 - MPMX20_01955 0.27 +1.9 2,051,614 + MPMX20_01955 0.40 +0.6 2,051,621 + MPMX20_01955 0.41 +1.4 2,051,644 + MPMX20_01955 0.43 -1.3 2,051,645 + MPMX20_01955 0.43 +0.4 2,051,653 - MPMX20_01955 0.44 -1.0 2,051,690 - MPMX20_01955 0.48 +2.7 2,051,725 + MPMX20_01955 0.51 -0.2 2,051,733 - MPMX20_01955 0.52 -2.2 2,051,747 + MPMX20_01955 0.53 +1.2 2,051,775 - MPMX20_01955 0.56 +0.7 2,051,965 - MPMX20_01955 0.75 +0.2 2,052,008 - MPMX20_01955 0.79 -2.5 2,052,017 + MPMX20_01955 0.80 +1.7 2,052,025 + MPMX20_01955 0.80 -1.4 2,052,033 - MPMX20_01955 0.81 +0.5 2,052,033 - MPMX20_01955 0.81 +3.0 2,052,033 - MPMX20_01955 0.81 +1.9 2,052,033 - MPMX20_01955 0.81 -0.4 2,052,125 + -2.9 2,052,130 + -1.0 2,052,156 + -2.9 2,052,172 + -2.4 2,052,238 + -3.5 2,052,255 + -0.6 2,052,282 + -0.4 2,052,282 + -1.8 2,052,290 - MPMX20_01956 0.11 -3.8 2,052,319 - MPMX20_01956 0.15 +2.0 2,052,329 + MPMX20_01956 0.17 -3.1 2,052,329 + MPMX20_01956 0.17 +2.9 2,052,353 - MPMX20_01956 0.20 -0.1 2,052,353 - MPMX20_01956 0.20 +1.7 2,052,353 - MPMX20_01956 0.20 -0.5 2,052,461 - MPMX20_01956 0.36 -2.6 2,052,482 + MPMX20_01956 0.40 -3.2 2,052,532 + MPMX20_01956 0.47 -1.1 2,052,601 + MPMX20_01956 0.57 -0.4 2,052,626 - MPMX20_01956 0.61 -1.7 2,052,634 - MPMX20_01956 0.62 -0.5 2,052,654 + MPMX20_01956 0.65 +0.2 2,052,662 - MPMX20_01956 0.67 +1.9 2,052,667 - MPMX20_01956 0.67 -0.0 2,052,669 + MPMX20_01956 0.68 -2.1 2,052,669 + MPMX20_01956 0.68 +1.2 2,052,677 - MPMX20_01956 0.69 -2.8 2,052,720 + MPMX20_01956 0.75 +1.0 2,052,791 + MPMX20_01956 0.86 +1.9 2,052,815 + MPMX20_01956 0.89 +1.1 2,052,838 + +3.5 2,052,846 - +1.1 2,052,846 - +2.0 2,052,856 + +0.9 2,052,856 + +0.8 2,052,856 + +1.4 2,052,856 + +3.0 2,052,863 - +3.6 2,052,864 - +3.4 2,052,864 - -2.3 2,052,864 - +1.3 2,052,864 - -2.0 2,052,876 - -3.1 2,052,880 + +1.4 2,052,942 + -3.4 2,052,942 + +1.3 2,052,947 + +4.0 2,052,950 - +2.3 2,052,964 - +1.2 2,052,964 - -2.1 2,052,982 + -1.3 2,052,990 + -3.2 2,053,033 + MPMX20_01957 0.15 -0.4 2,053,033 + MPMX20_01957 0.15 -3.5 2,053,033 + MPMX20_01957 0.15 +1.7 2,053,033 + MPMX20_01957 0.15 -0.8 2,053,054 + MPMX20_01957 0.17 +0.8 2,053,065 - MPMX20_01957 0.19 -1.3 2,053,089 + MPMX20_01957 0.22 +0.1 2,053,099 + MPMX20_01957 0.23 -2.3 2,053,099 + MPMX20_01957 0.23 +2.5 2,053,099 + MPMX20_01957 0.23 +1.8 2,053,099 + MPMX20_01957 0.23 -3.0 2,053,107 - MPMX20_01957 0.24 -3.4 2,053,107 - MPMX20_01957 0.24 -1.4 2,053,107 - MPMX20_01957 0.24 -0.9 2,053,107 - MPMX20_01957 0.24 -3.5 2,053,112 - MPMX20_01957 0.24 -0.4 2,053,114 + MPMX20_01957 0.25 -1.9 2,053,151 + MPMX20_01957 0.29 +0.7 2,053,157 + MPMX20_01957 0.30 +2.5 2,053,203 - MPMX20_01957 0.36 +1.7
Or see this region's nucleotide sequence