Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01701

Experiment: octanoate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01699 and MPMX20_01700 are separated by 243 nucleotidesMPMX20_01700 and MPMX20_01701 overlap by 4 nucleotidesMPMX20_01701 and MPMX20_01702 are separated by 101 nucleotides MPMX20_01699: MPMX20_01699 - Pyrimidine monooxygenase RutA, at 1,794,760 to 1,795,851 _01699 MPMX20_01700: MPMX20_01700 - HTH-type transcriptional regulator RutR, at 1,796,095 to 1,796,733 _01700 MPMX20_01701: MPMX20_01701 - hypothetical protein, at 1,796,730 to 1,797,125 _01701 MPMX20_01702: MPMX20_01702 - Bifunctional protein PutA, at 1,797,227 to 1,801,189 _01702 Position (kb) 1796 1797 1798Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 1795.757 kb on + strandat 1795.757 kb on + strandat 1795.757 kb on + strandat 1795.757 kb on + strandat 1795.757 kb on + strandat 1795.765 kb on - strandat 1795.803 kb on + strandat 1795.963 kb on + strandat 1796.036 kb on + strandat 1796.044 kb on - strandat 1796.061 kb on - strandat 1796.168 kb on + strand, within MPMX20_01700at 1796.173 kb on + strand, within MPMX20_01700at 1796.178 kb on + strand, within MPMX20_01700at 1796.299 kb on - strand, within MPMX20_01700at 1796.364 kb on + strand, within MPMX20_01700at 1796.426 kb on + strand, within MPMX20_01700at 1796.431 kb on + strand, within MPMX20_01700at 1796.431 kb on + strand, within MPMX20_01700at 1796.449 kb on - strand, within MPMX20_01700at 1796.600 kb on + strand, within MPMX20_01700at 1796.607 kb on + strand, within MPMX20_01700at 1796.631 kb on + strand, within MPMX20_01700at 1796.631 kb on + strand, within MPMX20_01700at 1796.744 kb on + strandat 1796.749 kb on + strandat 1796.767 kb on + strandat 1796.776 kb on - strand, within MPMX20_01701at 1796.833 kb on - strand, within MPMX20_01701at 1796.846 kb on + strand, within MPMX20_01701at 1796.854 kb on - strand, within MPMX20_01701at 1796.893 kb on + strand, within MPMX20_01701at 1796.898 kb on + strand, within MPMX20_01701at 1796.901 kb on - strand, within MPMX20_01701at 1796.903 kb on + strand, within MPMX20_01701at 1796.903 kb on + strand, within MPMX20_01701at 1796.903 kb on + strand, within MPMX20_01701at 1796.903 kb on + strand, within MPMX20_01701at 1796.911 kb on - strand, within MPMX20_01701at 1796.911 kb on - strand, within MPMX20_01701at 1796.911 kb on - strand, within MPMX20_01701at 1796.979 kb on + strand, within MPMX20_01701at 1797.004 kb on + strand, within MPMX20_01701at 1797.004 kb on + strand, within MPMX20_01701at 1797.004 kb on + strand, within MPMX20_01701at 1797.004 kb on + strand, within MPMX20_01701at 1797.012 kb on + strand, within MPMX20_01701at 1797.012 kb on + strand, within MPMX20_01701at 1797.020 kb on + strand, within MPMX20_01701at 1797.020 kb on - strand, within MPMX20_01701at 1797.028 kb on - strand, within MPMX20_01701at 1797.092 kb on + strandat 1797.113 kb on + strandat 1797.158 kb on + strandat 1797.158 kb on + strandat 1797.158 kb on + strandat 1797.166 kb on - strandat 1797.197 kb on + strandat 1797.270 kb on + strandat 1797.294 kb on + strandat 1797.294 kb on + strandat 1797.304 kb on - strandat 1797.338 kb on + strandat 1797.338 kb on + strandat 1797.346 kb on - strandat 1797.346 kb on - strandat 1797.450 kb on + strandat 1797.499 kb on - strandat 1797.610 kb on + strandat 1797.610 kb on + strandat 1797.618 kb on - strandat 1797.618 kb on - strandat 1797.631 kb on + strand, within MPMX20_01702at 1797.639 kb on + strand, within MPMX20_01702at 1797.670 kb on - strand, within MPMX20_01702at 1797.678 kb on + strand, within MPMX20_01702at 1797.707 kb on - strand, within MPMX20_01702at 1797.727 kb on - strand, within MPMX20_01702at 1797.780 kb on + strand, within MPMX20_01702at 1797.780 kb on + strand, within MPMX20_01702at 1797.780 kb on + strand, within MPMX20_01702at 1797.780 kb on + strand, within MPMX20_01702at 1797.788 kb on - strand, within MPMX20_01702at 1797.788 kb on - strand, within MPMX20_01702at 1797.788 kb on - strand, within MPMX20_01702at 1797.788 kb on - strand, within MPMX20_01702at 1797.788 kb on - strand, within MPMX20_01702at 1797.790 kb on - strand, within MPMX20_01702at 1797.811 kb on - strand, within MPMX20_01702at 1797.826 kb on + strand, within MPMX20_01702at 1797.882 kb on - strand, within MPMX20_01702at 1797.938 kb on + strand, within MPMX20_01702at 1797.939 kb on - strand, within MPMX20_01702at 1797.943 kb on + strand, within MPMX20_01702at 1797.969 kb on + strand, within MPMX20_01702at 1797.969 kb on + strand, within MPMX20_01702at 1797.977 kb on - strand, within MPMX20_01702at 1797.977 kb on - strand, within MPMX20_01702at 1798.006 kb on - strand, within MPMX20_01702at 1798.011 kb on - strand, within MPMX20_01702at 1798.043 kb on + strand, within MPMX20_01702at 1798.046 kb on - strand, within MPMX20_01702at 1798.051 kb on - strand, within MPMX20_01702at 1798.070 kb on - strand, within MPMX20_01702at 1798.123 kb on - strand, within MPMX20_01702

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Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
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1,795,757 + -2.2
1,795,757 + +0.5
1,795,757 + -0.5
1,795,757 + -1.4
1,795,757 + +1.4
1,795,765 - +1.9
1,795,803 + +2.0
1,795,963 + -0.8
1,796,036 + -2.4
1,796,044 - -2.6
1,796,061 - -4.4
1,796,168 + MPMX20_01700 0.11 +1.5
1,796,173 + MPMX20_01700 0.12 -2.7
1,796,178 + MPMX20_01700 0.13 +1.2
1,796,299 - MPMX20_01700 0.32 -1.4
1,796,364 + MPMX20_01700 0.42 +0.2
1,796,426 + MPMX20_01700 0.52 -2.3
1,796,431 + MPMX20_01700 0.53 -1.9
1,796,431 + MPMX20_01700 0.53 +1.4
1,796,449 - MPMX20_01700 0.55 +3.1
1,796,600 + MPMX20_01700 0.79 +0.8
1,796,607 + MPMX20_01700 0.80 +0.8
1,796,631 + MPMX20_01700 0.84 +0.2
1,796,631 + MPMX20_01700 0.84 +2.2
1,796,744 + -2.2
1,796,749 + +0.6
1,796,767 + +2.3
1,796,776 - MPMX20_01701 0.12 +2.4
1,796,833 - MPMX20_01701 0.26 -1.7
1,796,846 + MPMX20_01701 0.29 -0.6
1,796,854 - MPMX20_01701 0.31 +2.1
1,796,893 + MPMX20_01701 0.41 -1.9
1,796,898 + MPMX20_01701 0.42 -2.5
1,796,901 - MPMX20_01701 0.43 +1.9
1,796,903 + MPMX20_01701 0.44 +2.6
1,796,903 + MPMX20_01701 0.44 -3.0
1,796,903 + MPMX20_01701 0.44 -2.0
1,796,903 + MPMX20_01701 0.44 +1.0
1,796,911 - MPMX20_01701 0.46 +1.5
1,796,911 - MPMX20_01701 0.46 +1.2
1,796,911 - MPMX20_01701 0.46 -3.6
1,796,979 + MPMX20_01701 0.63 -1.4
1,797,004 + MPMX20_01701 0.69 +3.1
1,797,004 + MPMX20_01701 0.69 +1.4
1,797,004 + MPMX20_01701 0.69 +1.1
1,797,004 + MPMX20_01701 0.69 +0.8
1,797,012 + MPMX20_01701 0.71 -3.4
1,797,012 + MPMX20_01701 0.71 +1.1
1,797,020 + MPMX20_01701 0.73 +0.9
1,797,020 - MPMX20_01701 0.73 -2.3
1,797,028 - MPMX20_01701 0.75 +1.3
1,797,092 + +1.4
1,797,113 + +0.1
1,797,158 + -0.1
1,797,158 + -0.2
1,797,158 + +0.0
1,797,166 - -1.5
1,797,197 + +0.8
1,797,270 + -0.1
1,797,294 + -1.2
1,797,294 + +2.0
1,797,304 - +1.8
1,797,338 + +4.1
1,797,338 + -3.3
1,797,346 - -2.0
1,797,346 - +0.4
1,797,450 + +1.5
1,797,499 - +1.9
1,797,610 + +0.2
1,797,610 + +0.6
1,797,618 - -1.4
1,797,618 - -2.2
1,797,631 + MPMX20_01702 0.10 +0.8
1,797,639 + MPMX20_01702 0.10 +2.2
1,797,670 - MPMX20_01702 0.11 +2.1
1,797,678 + MPMX20_01702 0.11 +1.3
1,797,707 - MPMX20_01702 0.12 -2.9
1,797,727 - MPMX20_01702 0.13 -1.1
1,797,780 + MPMX20_01702 0.14 +1.1
1,797,780 + MPMX20_01702 0.14 +2.4
1,797,780 + MPMX20_01702 0.14 +1.8
1,797,780 + MPMX20_01702 0.14 +0.7
1,797,788 - MPMX20_01702 0.14 -0.8
1,797,788 - MPMX20_01702 0.14 -3.6
1,797,788 - MPMX20_01702 0.14 +1.0
1,797,788 - MPMX20_01702 0.14 -0.4
1,797,788 - MPMX20_01702 0.14 -3.7
1,797,790 - MPMX20_01702 0.14 +2.9
1,797,811 - MPMX20_01702 0.15 -0.2
1,797,826 + MPMX20_01702 0.15 -0.8
1,797,882 - MPMX20_01702 0.17 +0.4
1,797,938 + MPMX20_01702 0.18 +1.0
1,797,939 - MPMX20_01702 0.18 -1.9
1,797,943 + MPMX20_01702 0.18 -2.8
1,797,969 + MPMX20_01702 0.19 -2.7
1,797,969 + MPMX20_01702 0.19 -1.3
1,797,977 - MPMX20_01702 0.19 -2.1
1,797,977 - MPMX20_01702 0.19 -2.9
1,798,006 - MPMX20_01702 0.20 +1.4
1,798,011 - MPMX20_01702 0.20 -1.1
1,798,043 + MPMX20_01702 0.21 +1.6
1,798,046 - MPMX20_01702 0.21 -1.7
1,798,051 - MPMX20_01702 0.21 -3.2
1,798,070 - MPMX20_01702 0.21 -1.9
1,798,123 - MPMX20_01702 0.23 -2.3

Or see this region's nucleotide sequence