Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01630

Experiment: octanoate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01629 and MPMX20_01630 overlap by 4 nucleotidesMPMX20_01630 and MPMX20_01631 overlap by 1 nucleotides MPMX20_01629: MPMX20_01629 - hypothetical protein, at 1,718,741 to 1,720,090 _01629 MPMX20_01630: MPMX20_01630 - hypothetical protein, at 1,720,087 to 1,720,776 _01630 MPMX20_01631: MPMX20_01631 - Peptidoglycan-associated lipoprotein, at 1,720,776 to 1,722,455 _01631 Position (kb) 1720 1721Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 1719.140 kb on + strand, within MPMX20_01629at 1719.167 kb on + strand, within MPMX20_01629at 1719.190 kb on + strand, within MPMX20_01629at 1719.258 kb on - strand, within MPMX20_01629at 1719.258 kb on - strand, within MPMX20_01629at 1719.330 kb on + strand, within MPMX20_01629at 1719.330 kb on + strand, within MPMX20_01629at 1719.330 kb on + strand, within MPMX20_01629at 1719.330 kb on + strand, within MPMX20_01629at 1719.330 kb on + strand, within MPMX20_01629at 1719.338 kb on - strand, within MPMX20_01629at 1719.338 kb on - strand, within MPMX20_01629at 1719.338 kb on - strand, within MPMX20_01629at 1719.338 kb on - strand, within MPMX20_01629at 1719.338 kb on - strand, within MPMX20_01629at 1719.338 kb on - strand, within MPMX20_01629at 1719.338 kb on - strand, within MPMX20_01629at 1719.338 kb on - strand, within MPMX20_01629at 1719.338 kb on - strand, within MPMX20_01629at 1719.338 kb on - strand, within MPMX20_01629at 1719.348 kb on + strand, within MPMX20_01629at 1719.355 kb on - strand, within MPMX20_01629at 1719.528 kb on + strand, within MPMX20_01629at 1719.533 kb on + strand, within MPMX20_01629at 1719.538 kb on + strand, within MPMX20_01629at 1719.538 kb on + strand, within MPMX20_01629at 1719.538 kb on + strand, within MPMX20_01629at 1719.546 kb on - strand, within MPMX20_01629at 1719.546 kb on - strand, within MPMX20_01629at 1719.546 kb on - strand, within MPMX20_01629at 1719.587 kb on - strand, within MPMX20_01629at 1719.643 kb on - strand, within MPMX20_01629at 1719.662 kb on - strand, within MPMX20_01629at 1719.664 kb on + strand, within MPMX20_01629at 1719.672 kb on - strand, within MPMX20_01629at 1719.672 kb on - strand, within MPMX20_01629at 1719.685 kb on + strand, within MPMX20_01629at 1719.752 kb on - strand, within MPMX20_01629at 1719.759 kb on + strand, within MPMX20_01629at 1719.855 kb on - strand, within MPMX20_01629at 1719.855 kb on - strand, within MPMX20_01629at 1719.888 kb on + strand, within MPMX20_01629at 1719.895 kb on + strand, within MPMX20_01629at 1719.895 kb on + strand, within MPMX20_01629at 1719.895 kb on + strand, within MPMX20_01629at 1719.945 kb on - strand, within MPMX20_01629at 1719.959 kb on + strandat 1720.059 kb on + strandat 1720.069 kb on + strandat 1720.088 kb on + strandat 1720.175 kb on + strand, within MPMX20_01630at 1720.175 kb on + strand, within MPMX20_01630at 1720.206 kb on + strand, within MPMX20_01630at 1720.206 kb on + strand, within MPMX20_01630at 1720.206 kb on + strand, within MPMX20_01630at 1720.206 kb on + strand, within MPMX20_01630at 1720.214 kb on - strand, within MPMX20_01630at 1720.214 kb on - strand, within MPMX20_01630at 1720.225 kb on + strand, within MPMX20_01630at 1720.233 kb on - strand, within MPMX20_01630at 1720.233 kb on - strand, within MPMX20_01630at 1720.240 kb on + strand, within MPMX20_01630at 1720.409 kb on + strand, within MPMX20_01630at 1720.466 kb on + strand, within MPMX20_01630at 1720.466 kb on + strand, within MPMX20_01630at 1720.480 kb on + strand, within MPMX20_01630at 1720.547 kb on + strand, within MPMX20_01630at 1720.555 kb on - strand, within MPMX20_01630at 1720.567 kb on - strand, within MPMX20_01630at 1720.571 kb on + strand, within MPMX20_01630at 1720.604 kb on + strand, within MPMX20_01630at 1720.604 kb on + strand, within MPMX20_01630at 1720.604 kb on + strand, within MPMX20_01630at 1720.604 kb on + strand, within MPMX20_01630at 1720.612 kb on - strand, within MPMX20_01630at 1720.612 kb on - strand, within MPMX20_01630at 1720.612 kb on - strand, within MPMX20_01630at 1720.614 kb on + strand, within MPMX20_01630at 1720.651 kb on + strand, within MPMX20_01630at 1720.659 kb on - strand, within MPMX20_01630at 1720.659 kb on - strand, within MPMX20_01630at 1720.671 kb on + strand, within MPMX20_01630at 1720.676 kb on + strand, within MPMX20_01630at 1720.718 kb on + strandat 1720.778 kb on - strandat 1720.783 kb on + strandat 1720.949 kb on + strand, within MPMX20_01631at 1720.962 kb on - strand, within MPMX20_01631at 1720.975 kb on - strand, within MPMX20_01631at 1720.977 kb on + strand, within MPMX20_01631at 1721.004 kb on - strand, within MPMX20_01631at 1721.013 kb on + strand, within MPMX20_01631at 1721.018 kb on + strand, within MPMX20_01631at 1721.030 kb on + strand, within MPMX20_01631at 1721.063 kb on + strand, within MPMX20_01631at 1721.071 kb on - strand, within MPMX20_01631at 1721.071 kb on - strand, within MPMX20_01631at 1721.081 kb on - strand, within MPMX20_01631at 1721.081 kb on - strand, within MPMX20_01631at 1721.121 kb on - strand, within MPMX20_01631at 1721.204 kb on + strand, within MPMX20_01631at 1721.212 kb on - strand, within MPMX20_01631at 1721.214 kb on + strand, within MPMX20_01631at 1721.214 kb on + strand, within MPMX20_01631at 1721.214 kb on + strand, within MPMX20_01631at 1721.214 kb on + strand, within MPMX20_01631at 1721.217 kb on - strand, within MPMX20_01631at 1721.221 kb on + strand, within MPMX20_01631at 1721.222 kb on - strand, within MPMX20_01631at 1721.227 kb on - strand, within MPMX20_01631at 1721.436 kb on - strand, within MPMX20_01631at 1721.481 kb on - strand, within MPMX20_01631at 1721.505 kb on - strand, within MPMX20_01631at 1721.562 kb on + strand, within MPMX20_01631at 1721.589 kb on + strand, within MPMX20_01631at 1721.614 kb on - strand, within MPMX20_01631at 1721.699 kb on - strand, within MPMX20_01631at 1721.716 kb on + strand, within MPMX20_01631at 1721.732 kb on - strand, within MPMX20_01631at 1721.764 kb on - strand, within MPMX20_01631

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Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
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1,719,140 + MPMX20_01629 0.30 -1.1
1,719,167 + MPMX20_01629 0.32 +2.2
1,719,190 + MPMX20_01629 0.33 -2.5
1,719,258 - MPMX20_01629 0.38 +0.1
1,719,258 - MPMX20_01629 0.38 -2.2
1,719,330 + MPMX20_01629 0.44 +2.1
1,719,330 + MPMX20_01629 0.44 -1.2
1,719,330 + MPMX20_01629 0.44 -2.3
1,719,330 + MPMX20_01629 0.44 -1.7
1,719,330 + MPMX20_01629 0.44 -4.0
1,719,338 - MPMX20_01629 0.44 -1.9
1,719,338 - MPMX20_01629 0.44 -2.0
1,719,338 - MPMX20_01629 0.44 +0.0
1,719,338 - MPMX20_01629 0.44 +3.1
1,719,338 - MPMX20_01629 0.44 -2.7
1,719,338 - MPMX20_01629 0.44 +0.1
1,719,338 - MPMX20_01629 0.44 -1.2
1,719,338 - MPMX20_01629 0.44 -2.3
1,719,338 - MPMX20_01629 0.44 +0.4
1,719,338 - MPMX20_01629 0.44 +0.2
1,719,348 + MPMX20_01629 0.45 -0.5
1,719,355 - MPMX20_01629 0.45 -3.3
1,719,528 + MPMX20_01629 0.58 -3.1
1,719,533 + MPMX20_01629 0.59 -1.1
1,719,538 + MPMX20_01629 0.59 +0.6
1,719,538 + MPMX20_01629 0.59 -3.3
1,719,538 + MPMX20_01629 0.59 -3.1
1,719,546 - MPMX20_01629 0.60 -2.2
1,719,546 - MPMX20_01629 0.60 +2.2
1,719,546 - MPMX20_01629 0.60 +2.9
1,719,587 - MPMX20_01629 0.63 -1.2
1,719,643 - MPMX20_01629 0.67 -2.7
1,719,662 - MPMX20_01629 0.68 +2.7
1,719,664 + MPMX20_01629 0.68 -2.6
1,719,672 - MPMX20_01629 0.69 -2.2
1,719,672 - MPMX20_01629 0.69 +0.4
1,719,685 + MPMX20_01629 0.70 -2.1
1,719,752 - MPMX20_01629 0.75 -3.4
1,719,759 + MPMX20_01629 0.75 +0.3
1,719,855 - MPMX20_01629 0.83 -2.1
1,719,855 - MPMX20_01629 0.83 -2.6
1,719,888 + MPMX20_01629 0.85 -1.7
1,719,895 + MPMX20_01629 0.85 +0.4
1,719,895 + MPMX20_01629 0.85 -2.7
1,719,895 + MPMX20_01629 0.85 -1.3
1,719,945 - MPMX20_01629 0.89 +4.4
1,719,959 + -2.5
1,720,059 + +1.1
1,720,069 + -0.1
1,720,088 + -0.3
1,720,175 + MPMX20_01630 0.13 -0.2
1,720,175 + MPMX20_01630 0.13 -2.4
1,720,206 + MPMX20_01630 0.17 +2.1
1,720,206 + MPMX20_01630 0.17 -0.2
1,720,206 + MPMX20_01630 0.17 -3.0
1,720,206 + MPMX20_01630 0.17 +0.6
1,720,214 - MPMX20_01630 0.18 +2.4
1,720,214 - MPMX20_01630 0.18 -3.1
1,720,225 + MPMX20_01630 0.20 -0.3
1,720,233 - MPMX20_01630 0.21 +1.6
1,720,233 - MPMX20_01630 0.21 +2.1
1,720,240 + MPMX20_01630 0.22 +0.3
1,720,409 + MPMX20_01630 0.47 +0.7
1,720,466 + MPMX20_01630 0.55 +1.4
1,720,466 + MPMX20_01630 0.55 +3.5
1,720,480 + MPMX20_01630 0.57 +1.8
1,720,547 + MPMX20_01630 0.67 +1.8
1,720,555 - MPMX20_01630 0.68 +2.7
1,720,567 - MPMX20_01630 0.70 +3.2
1,720,571 + MPMX20_01630 0.70 -2.0
1,720,604 + MPMX20_01630 0.75 -1.3
1,720,604 + MPMX20_01630 0.75 +1.3
1,720,604 + MPMX20_01630 0.75 -1.3
1,720,604 + MPMX20_01630 0.75 +1.1
1,720,612 - MPMX20_01630 0.76 +1.6
1,720,612 - MPMX20_01630 0.76 +1.2
1,720,612 - MPMX20_01630 0.76 -2.1
1,720,614 + MPMX20_01630 0.76 +1.8
1,720,651 + MPMX20_01630 0.82 +2.7
1,720,659 - MPMX20_01630 0.83 -0.6
1,720,659 - MPMX20_01630 0.83 -1.2
1,720,671 + MPMX20_01630 0.85 -2.7
1,720,676 + MPMX20_01630 0.85 +1.3
1,720,718 + +0.1
1,720,778 - -3.3
1,720,783 + -1.9
1,720,949 + MPMX20_01631 0.10 +2.6
1,720,962 - MPMX20_01631 0.11 +1.4
1,720,975 - MPMX20_01631 0.12 +1.3
1,720,977 + MPMX20_01631 0.12 +2.2
1,721,004 - MPMX20_01631 0.14 +1.9
1,721,013 + MPMX20_01631 0.14 -2.3
1,721,018 + MPMX20_01631 0.14 -0.6
1,721,030 + MPMX20_01631 0.15 -2.4
1,721,063 + MPMX20_01631 0.17 +0.1
1,721,071 - MPMX20_01631 0.18 -1.2
1,721,071 - MPMX20_01631 0.18 +0.1
1,721,081 - MPMX20_01631 0.18 +0.5
1,721,081 - MPMX20_01631 0.18 -0.1
1,721,121 - MPMX20_01631 0.21 +0.8
1,721,204 + MPMX20_01631 0.25 +1.0
1,721,212 - MPMX20_01631 0.26 +1.3
1,721,214 + MPMX20_01631 0.26 -1.9
1,721,214 + MPMX20_01631 0.26 -1.4
1,721,214 + MPMX20_01631 0.26 -2.9
1,721,214 + MPMX20_01631 0.26 +1.2
1,721,217 - MPMX20_01631 0.26 -2.1
1,721,221 + MPMX20_01631 0.26 +0.9
1,721,222 - MPMX20_01631 0.27 -1.3
1,721,227 - MPMX20_01631 0.27 -0.6
1,721,436 - MPMX20_01631 0.39 +3.1
1,721,481 - MPMX20_01631 0.42 +1.7
1,721,505 - MPMX20_01631 0.43 +1.7
1,721,562 + MPMX20_01631 0.47 +0.1
1,721,589 + MPMX20_01631 0.48 +0.8
1,721,614 - MPMX20_01631 0.50 -1.3
1,721,699 - MPMX20_01631 0.55 +1.9
1,721,716 + MPMX20_01631 0.56 -2.5
1,721,732 - MPMX20_01631 0.57 -1.4
1,721,764 - MPMX20_01631 0.59 -2.1

Or see this region's nucleotide sequence