Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01608

Experiment: octanoate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01607 and MPMX20_01608 are separated by 354 nucleotidesMPMX20_01608 and MPMX20_01609 are separated by 163 nucleotidesMPMX20_01609 and MPMX20_01610 overlap by 44 nucleotides MPMX20_01607: MPMX20_01607 - Outer membrane protein A, at 1,699,326 to 1,700,381 _01607 MPMX20_01608: MPMX20_01608 - Cell division inhibitor SulA, at 1,700,736 to 1,701,299 _01608 MPMX20_01609: MPMX20_01609 - Protein Sxy, at 1,701,463 to 1,702,089 _01609 MPMX20_01610: MPMX20_01610 - Inner membrane protein YccS, at 1,702,046 to 1,704,208 _01610 Position (kb) 1700 1701 1702Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 1699.986 kb on + strand, within MPMX20_01607at 1700.011 kb on - strand, within MPMX20_01607at 1700.031 kb on - strand, within MPMX20_01607at 1700.058 kb on - strand, within MPMX20_01607at 1700.087 kb on - strand, within MPMX20_01607at 1700.137 kb on - strand, within MPMX20_01607at 1700.139 kb on + strand, within MPMX20_01607at 1700.147 kb on - strand, within MPMX20_01607at 1700.175 kb on - strand, within MPMX20_01607at 1700.200 kb on - strand, within MPMX20_01607at 1700.227 kb on + strand, within MPMX20_01607at 1700.265 kb on - strand, within MPMX20_01607at 1700.327 kb on - strandat 1700.338 kb on + strandat 1700.346 kb on - strandat 1700.452 kb on - strandat 1700.485 kb on + strandat 1700.491 kb on + strandat 1700.498 kb on + strandat 1700.522 kb on + strandat 1700.530 kb on - strandat 1700.530 kb on - strandat 1700.530 kb on - strandat 1700.530 kb on - strandat 1700.530 kb on - strandat 1700.532 kb on - strandat 1700.548 kb on + strandat 1700.556 kb on - strandat 1700.556 kb on - strandat 1700.650 kb on + strandat 1700.650 kb on + strandat 1700.650 kb on + strandat 1700.658 kb on - strandat 1700.658 kb on - strandat 1700.774 kb on + strandat 1700.795 kb on - strand, within MPMX20_01608at 1700.832 kb on + strand, within MPMX20_01608at 1700.934 kb on + strand, within MPMX20_01608at 1700.991 kb on - strand, within MPMX20_01608at 1701.001 kb on + strand, within MPMX20_01608at 1701.001 kb on + strand, within MPMX20_01608at 1701.098 kb on + strand, within MPMX20_01608at 1701.147 kb on + strand, within MPMX20_01608at 1701.155 kb on - strand, within MPMX20_01608at 1701.155 kb on - strand, within MPMX20_01608at 1701.172 kb on + strand, within MPMX20_01608at 1701.180 kb on - strand, within MPMX20_01608at 1701.207 kb on + strand, within MPMX20_01608at 1701.207 kb on - strand, within MPMX20_01608at 1701.221 kb on + strand, within MPMX20_01608at 1701.240 kb on - strand, within MPMX20_01608at 1701.345 kb on + strandat 1701.515 kb on - strandat 1701.516 kb on - strandat 1701.533 kb on + strand, within MPMX20_01609at 1701.534 kb on - strand, within MPMX20_01609at 1701.541 kb on - strand, within MPMX20_01609at 1701.541 kb on - strand, within MPMX20_01609at 1701.541 kb on - strand, within MPMX20_01609at 1701.543 kb on + strand, within MPMX20_01609at 1701.551 kb on + strand, within MPMX20_01609at 1701.561 kb on + strand, within MPMX20_01609at 1701.610 kb on + strand, within MPMX20_01609at 1701.610 kb on + strand, within MPMX20_01609at 1701.612 kb on - strand, within MPMX20_01609at 1701.680 kb on - strand, within MPMX20_01609at 1701.686 kb on + strand, within MPMX20_01609at 1701.722 kb on + strand, within MPMX20_01609at 1701.740 kb on - strand, within MPMX20_01609at 1701.747 kb on + strand, within MPMX20_01609at 1701.861 kb on + strand, within MPMX20_01609at 1701.861 kb on + strand, within MPMX20_01609at 1701.961 kb on - strand, within MPMX20_01609at 1701.961 kb on - strand, within MPMX20_01609at 1701.961 kb on - strand, within MPMX20_01609at 1701.971 kb on + strand, within MPMX20_01609at 1701.975 kb on + strand, within MPMX20_01609at 1701.983 kb on - strand, within MPMX20_01609at 1701.986 kb on + strand, within MPMX20_01609at 1701.986 kb on + strand, within MPMX20_01609at 1702.002 kb on - strand, within MPMX20_01609at 1702.011 kb on - strand, within MPMX20_01609at 1702.039 kb on + strandat 1702.043 kb on + strandat 1702.051 kb on - strandat 1702.061 kb on + strandat 1702.064 kb on - strandat 1702.079 kb on + strandat 1702.253 kb on + strandat 1702.261 kb on - strandat 1702.284 kb on + strand, within MPMX20_01610

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Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
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1,699,986 + MPMX20_01607 0.62 -1.4
1,700,011 - MPMX20_01607 0.65 -2.0
1,700,031 - MPMX20_01607 0.67 +0.3
1,700,058 - MPMX20_01607 0.69 -0.2
1,700,087 - MPMX20_01607 0.72 -2.0
1,700,137 - MPMX20_01607 0.77 -2.0
1,700,139 + MPMX20_01607 0.77 +0.8
1,700,147 - MPMX20_01607 0.78 -0.9
1,700,175 - MPMX20_01607 0.80 +0.1
1,700,200 - MPMX20_01607 0.83 -2.4
1,700,227 + MPMX20_01607 0.85 -1.3
1,700,265 - MPMX20_01607 0.89 -2.1
1,700,327 - -0.4
1,700,338 + +0.8
1,700,346 - -2.2
1,700,452 - -0.1
1,700,485 + +3.2
1,700,491 + -1.5
1,700,498 + -2.6
1,700,522 + -2.2
1,700,530 - -3.2
1,700,530 - -0.6
1,700,530 - +1.8
1,700,530 - -2.3
1,700,530 - +1.0
1,700,532 - -3.0
1,700,548 + -2.6
1,700,556 - +0.1
1,700,556 - +1.0
1,700,650 + -3.2
1,700,650 + -2.0
1,700,650 + -0.4
1,700,658 - +0.7
1,700,658 - +0.2
1,700,774 + +0.1
1,700,795 - MPMX20_01608 0.10 +2.1
1,700,832 + MPMX20_01608 0.17 -2.2
1,700,934 + MPMX20_01608 0.35 +0.1
1,700,991 - MPMX20_01608 0.45 +3.1
1,701,001 + MPMX20_01608 0.47 +1.5
1,701,001 + MPMX20_01608 0.47 +1.5
1,701,098 + MPMX20_01608 0.64 -2.2
1,701,147 + MPMX20_01608 0.73 +1.0
1,701,155 - MPMX20_01608 0.74 +1.0
1,701,155 - MPMX20_01608 0.74 -0.4
1,701,172 + MPMX20_01608 0.77 +0.3
1,701,180 - MPMX20_01608 0.79 -1.8
1,701,207 + MPMX20_01608 0.84 +0.8
1,701,207 - MPMX20_01608 0.84 -3.1
1,701,221 + MPMX20_01608 0.86 +3.2
1,701,240 - MPMX20_01608 0.89 +0.5
1,701,345 + -0.2
1,701,515 - -3.4
1,701,516 - -0.6
1,701,533 + MPMX20_01609 0.11 +1.3
1,701,534 - MPMX20_01609 0.11 +2.2
1,701,541 - MPMX20_01609 0.12 +0.4
1,701,541 - MPMX20_01609 0.12 -3.9
1,701,541 - MPMX20_01609 0.12 -3.4
1,701,543 + MPMX20_01609 0.13 +0.4
1,701,551 + MPMX20_01609 0.14 -3.0
1,701,561 + MPMX20_01609 0.16 +1.3
1,701,610 + MPMX20_01609 0.23 -2.2
1,701,610 + MPMX20_01609 0.23 -4.2
1,701,612 - MPMX20_01609 0.24 +1.1
1,701,680 - MPMX20_01609 0.35 -0.5
1,701,686 + MPMX20_01609 0.36 +2.3
1,701,722 + MPMX20_01609 0.41 +1.2
1,701,740 - MPMX20_01609 0.44 +1.5
1,701,747 + MPMX20_01609 0.45 +2.7
1,701,861 + MPMX20_01609 0.63 -0.1
1,701,861 + MPMX20_01609 0.63 -0.8
1,701,961 - MPMX20_01609 0.79 -0.4
1,701,961 - MPMX20_01609 0.79 -3.0
1,701,961 - MPMX20_01609 0.79 +0.4
1,701,971 + MPMX20_01609 0.81 -1.8
1,701,975 + MPMX20_01609 0.82 -2.8
1,701,983 - MPMX20_01609 0.83 +2.4
1,701,986 + MPMX20_01609 0.83 -0.6
1,701,986 + MPMX20_01609 0.83 -2.6
1,702,002 - MPMX20_01609 0.86 -0.9
1,702,011 - MPMX20_01609 0.87 +0.4
1,702,039 + -2.2
1,702,043 + -1.0
1,702,051 - +1.8
1,702,061 + +0.7
1,702,064 - +1.9
1,702,079 + +0.8
1,702,253 + +0.3
1,702,261 - +0.6
1,702,284 + MPMX20_01610 0.11 +2.0

Or see this region's nucleotide sequence