Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01331

Experiment: octanoate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01329 and MPMX20_01330 are separated by 288 nucleotidesMPMX20_01330 and MPMX20_01331 are separated by 155 nucleotidesMPMX20_01331 and MPMX20_01332 are separated by 128 nucleotides MPMX20_01329: MPMX20_01329 - Ferric uptake regulation protein, at 1,388,483 to 1,388,929 _01329 MPMX20_01330: MPMX20_01330 - Flavodoxin 1, at 1,389,218 to 1,389,748 _01330 MPMX20_01331: MPMX20_01331 - putative protein YbfE, at 1,389,904 to 1,390,191 _01331 MPMX20_01332: MPMX20_01332 - Esterase YbfF, at 1,390,320 to 1,391,093 _01332 Position (kb) 1389 1390 1391Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 1388.906 kb on - strandat 1389.009 kb on - strandat 1389.122 kb on + strandat 1389.122 kb on + strandat 1389.122 kb on + strandat 1389.122 kb on + strandat 1389.122 kb on + strandat 1389.122 kb on + strandat 1389.130 kb on - strandat 1389.130 kb on - strandat 1389.130 kb on - strandat 1389.130 kb on - strandat 1389.130 kb on - strandat 1389.130 kb on - strandat 1389.135 kb on - strandat 1389.192 kb on + strandat 1389.250 kb on - strandat 1389.809 kb on - strandat 1389.822 kb on + strandat 1389.854 kb on + strandat 1389.854 kb on + strandat 1389.854 kb on + strandat 1389.854 kb on + strandat 1389.854 kb on + strandat 1389.854 kb on + strandat 1389.854 kb on + strandat 1389.854 kb on + strandat 1389.854 kb on + strandat 1389.854 kb on + strandat 1389.854 kb on + strandat 1389.862 kb on - strandat 1389.862 kb on - strandat 1389.862 kb on - strandat 1389.862 kb on - strandat 1389.862 kb on - strandat 1389.862 kb on - strandat 1389.864 kb on - strandat 1389.869 kb on - strandat 1389.880 kb on + strandat 1389.923 kb on + strandat 1389.931 kb on - strandat 1389.946 kb on - strand, within MPMX20_01331at 1389.960 kb on + strand, within MPMX20_01331at 1390.016 kb on + strand, within MPMX20_01331at 1390.029 kb on + strand, within MPMX20_01331at 1390.061 kb on + strand, within MPMX20_01331at 1390.069 kb on - strand, within MPMX20_01331at 1390.092 kb on + strand, within MPMX20_01331at 1390.155 kb on + strand, within MPMX20_01331at 1390.155 kb on + strand, within MPMX20_01331at 1390.225 kb on + strandat 1390.469 kb on + strand, within MPMX20_01332at 1390.499 kb on + strand, within MPMX20_01332at 1390.523 kb on + strand, within MPMX20_01332at 1390.548 kb on + strand, within MPMX20_01332at 1390.553 kb on - strand, within MPMX20_01332at 1390.647 kb on + strand, within MPMX20_01332at 1390.654 kb on + strand, within MPMX20_01332at 1390.655 kb on - strand, within MPMX20_01332at 1390.671 kb on + strand, within MPMX20_01332at 1390.687 kb on - strand, within MPMX20_01332at 1390.743 kb on - strand, within MPMX20_01332at 1390.772 kb on - strand, within MPMX20_01332at 1390.790 kb on - strand, within MPMX20_01332at 1390.994 kb on + strand, within MPMX20_01332at 1390.994 kb on + strand, within MPMX20_01332at 1390.994 kb on + strand, within MPMX20_01332at 1391.002 kb on - strand, within MPMX20_01332at 1391.007 kb on - strand, within MPMX20_01332at 1391.013 kb on + strand, within MPMX20_01332at 1391.122 kb on - strandat 1391.126 kb on + strandat 1391.127 kb on + strandat 1391.127 kb on + strandat 1391.129 kb on - strandat 1391.129 kb on - strandat 1391.163 kb on + strandat 1391.163 kb on - strandat 1391.171 kb on - strandat 1391.171 kb on - strandat 1391.171 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
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1,388,906 - +0.3
1,389,009 - +0.8
1,389,122 + +1.9
1,389,122 + -0.4
1,389,122 + -1.3
1,389,122 + -2.0
1,389,122 + +0.5
1,389,122 + +2.4
1,389,130 - -3.3
1,389,130 - -1.8
1,389,130 - -2.2
1,389,130 - -0.2
1,389,130 - +2.4
1,389,130 - +2.5
1,389,135 - +1.2
1,389,192 + -0.2
1,389,250 - +2.1
1,389,809 - +0.3
1,389,822 + -0.8
1,389,854 + -3.0
1,389,854 + -1.1
1,389,854 + +0.3
1,389,854 + +3.0
1,389,854 + +0.0
1,389,854 + +1.8
1,389,854 + +1.3
1,389,854 + -2.1
1,389,854 + -3.8
1,389,854 + +1.7
1,389,854 + +1.9
1,389,862 - -2.3
1,389,862 - -3.2
1,389,862 - +2.0
1,389,862 - +1.0
1,389,862 - +0.9
1,389,862 - -2.0
1,389,864 - +1.2
1,389,869 - +1.1
1,389,880 + -1.6
1,389,923 + -1.6
1,389,931 - -2.1
1,389,946 - MPMX20_01331 0.15 +0.4
1,389,960 + MPMX20_01331 0.19 +1.5
1,390,016 + MPMX20_01331 0.39 +0.0
1,390,029 + MPMX20_01331 0.43 +2.8
1,390,061 + MPMX20_01331 0.55 -1.1
1,390,069 - MPMX20_01331 0.57 +1.4
1,390,092 + MPMX20_01331 0.65 +2.6
1,390,155 + MPMX20_01331 0.87 -4.0
1,390,155 + MPMX20_01331 0.87 -0.2
1,390,225 + +1.4
1,390,469 + MPMX20_01332 0.19 +0.3
1,390,499 + MPMX20_01332 0.23 -0.4
1,390,523 + MPMX20_01332 0.26 +0.3
1,390,548 + MPMX20_01332 0.29 +0.4
1,390,553 - MPMX20_01332 0.30 +3.2
1,390,647 + MPMX20_01332 0.42 +1.6
1,390,654 + MPMX20_01332 0.43 -2.6
1,390,655 - MPMX20_01332 0.43 +2.8
1,390,671 + MPMX20_01332 0.45 -0.2
1,390,687 - MPMX20_01332 0.47 -1.3
1,390,743 - MPMX20_01332 0.55 -0.7
1,390,772 - MPMX20_01332 0.58 +1.3
1,390,790 - MPMX20_01332 0.61 -2.1
1,390,994 + MPMX20_01332 0.87 +3.0
1,390,994 + MPMX20_01332 0.87 -0.2
1,390,994 + MPMX20_01332 0.87 -1.6
1,391,002 - MPMX20_01332 0.88 -0.1
1,391,007 - MPMX20_01332 0.89 +3.5
1,391,013 + MPMX20_01332 0.90 +1.4
1,391,122 - -1.0
1,391,126 + -0.4
1,391,127 + +1.1
1,391,127 + +4.6
1,391,129 - -1.4
1,391,129 - +0.9
1,391,163 + +1.0
1,391,163 - -0.2
1,391,171 - -2.4
1,391,171 - -0.2
1,391,171 - +1.4

Or see this region's nucleotide sequence