Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01251

Experiment: octanoate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01249 and MPMX20_01250 overlap by 1 nucleotidesMPMX20_01250 and MPMX20_01251 are separated by 0 nucleotidesMPMX20_01251 and MPMX20_01252 are separated by 47 nucleotides MPMX20_01249: MPMX20_01249 - Enterobactin synthase component B, at 1,313,810 to 1,314,664 _01249 MPMX20_01250: MPMX20_01250 - 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase, at 1,314,664 to 1,315,419 _01250 MPMX20_01251: MPMX20_01251 - Proofreading thioesterase EntH, at 1,315,420 to 1,315,833 _01251 MPMX20_01252: MPMX20_01252 - Carboxypeptidase G2, at 1,315,881 to 1,316,993 _01252 Position (kb) 1315 1316Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 1314.423 kb on + strand, within MPMX20_01249at 1314.460 kb on + strand, within MPMX20_01249at 1314.530 kb on + strand, within MPMX20_01249at 1314.538 kb on - strand, within MPMX20_01249at 1314.578 kb on + strand, within MPMX20_01249at 1314.641 kb on - strandat 1314.693 kb on + strandat 1314.712 kb on + strandat 1314.718 kb on + strandat 1314.828 kb on + strand, within MPMX20_01250at 1314.873 kb on + strand, within MPMX20_01250at 1314.969 kb on - strand, within MPMX20_01250at 1315.000 kb on - strand, within MPMX20_01250at 1315.106 kb on - strand, within MPMX20_01250at 1315.148 kb on + strand, within MPMX20_01250at 1315.188 kb on - strand, within MPMX20_01250at 1315.199 kb on - strand, within MPMX20_01250at 1315.204 kb on - strand, within MPMX20_01250at 1315.246 kb on + strand, within MPMX20_01250at 1315.249 kb on - strand, within MPMX20_01250at 1315.278 kb on + strand, within MPMX20_01250at 1315.278 kb on + strand, within MPMX20_01250at 1315.278 kb on + strand, within MPMX20_01250at 1315.278 kb on + strand, within MPMX20_01250at 1315.286 kb on - strand, within MPMX20_01250at 1315.286 kb on - strand, within MPMX20_01250at 1315.297 kb on - strand, within MPMX20_01250at 1315.344 kb on - strandat 1315.344 kb on - strandat 1315.380 kb on + strandat 1315.408 kb on - strandat 1315.465 kb on + strand, within MPMX20_01251at 1315.473 kb on - strand, within MPMX20_01251at 1315.486 kb on + strand, within MPMX20_01251at 1315.486 kb on + strand, within MPMX20_01251at 1315.556 kb on + strand, within MPMX20_01251at 1315.556 kb on + strand, within MPMX20_01251at 1315.556 kb on + strand, within MPMX20_01251at 1315.564 kb on - strand, within MPMX20_01251at 1315.564 kb on - strand, within MPMX20_01251at 1315.672 kb on - strand, within MPMX20_01251at 1315.703 kb on + strand, within MPMX20_01251at 1315.720 kb on + strand, within MPMX20_01251at 1315.750 kb on + strand, within MPMX20_01251at 1315.758 kb on - strand, within MPMX20_01251at 1315.764 kb on + strand, within MPMX20_01251at 1315.789 kb on + strand, within MPMX20_01251at 1315.794 kb on + strandat 1315.797 kb on - strandat 1315.833 kb on + strandat 1315.841 kb on - strandat 1315.842 kb on + strandat 1315.843 kb on + strandat 1315.851 kb on - strandat 1315.851 kb on - strandat 1315.851 kb on - strandat 1315.867 kb on - strandat 1315.872 kb on + strandat 1315.886 kb on - strandat 1315.886 kb on - strandat 1315.918 kb on - strandat 1315.949 kb on + strandat 1315.979 kb on + strandat 1315.979 kb on + strandat 1315.979 kb on + strandat 1315.979 kb on + strandat 1315.979 kb on + strandat 1315.979 kb on + strandat 1315.979 kb on + strandat 1315.979 kb on + strandat 1315.979 kb on + strandat 1315.979 kb on + strandat 1315.987 kb on - strandat 1315.987 kb on - strandat 1315.987 kb on - strandat 1315.987 kb on - strandat 1315.987 kb on - strandat 1315.987 kb on - strandat 1315.987 kb on - strandat 1315.987 kb on - strandat 1316.014 kb on + strand, within MPMX20_01252at 1316.017 kb on - strand, within MPMX20_01252at 1316.164 kb on + strand, within MPMX20_01252at 1316.312 kb on + strand, within MPMX20_01252at 1316.312 kb on + strand, within MPMX20_01252at 1316.320 kb on - strand, within MPMX20_01252at 1316.320 kb on - strand, within MPMX20_01252at 1316.320 kb on - strand, within MPMX20_01252at 1316.385 kb on + strand, within MPMX20_01252at 1316.442 kb on + strand, within MPMX20_01252at 1316.484 kb on - strand, within MPMX20_01252at 1316.499 kb on - strand, within MPMX20_01252at 1316.541 kb on - strand, within MPMX20_01252at 1316.572 kb on + strand, within MPMX20_01252at 1316.610 kb on + strand, within MPMX20_01252at 1316.610 kb on + strand, within MPMX20_01252at 1316.617 kb on + strand, within MPMX20_01252at 1316.676 kb on + strand, within MPMX20_01252at 1316.676 kb on + strand, within MPMX20_01252at 1316.676 kb on + strand, within MPMX20_01252at 1316.676 kb on + strand, within MPMX20_01252at 1316.676 kb on + strand, within MPMX20_01252at 1316.690 kb on + strand, within MPMX20_01252at 1316.713 kb on - strand, within MPMX20_01252at 1316.786 kb on + strand, within MPMX20_01252at 1316.831 kb on + strand, within MPMX20_01252

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Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
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1,314,423 + MPMX20_01249 0.72 +1.6
1,314,460 + MPMX20_01249 0.76 +1.1
1,314,530 + MPMX20_01249 0.84 +0.6
1,314,538 - MPMX20_01249 0.85 -2.6
1,314,578 + MPMX20_01249 0.90 +1.5
1,314,641 - +1.6
1,314,693 + -0.3
1,314,712 + -2.3
1,314,718 + +1.8
1,314,828 + MPMX20_01250 0.22 +1.0
1,314,873 + MPMX20_01250 0.28 -2.0
1,314,969 - MPMX20_01250 0.40 +1.1
1,315,000 - MPMX20_01250 0.44 +1.6
1,315,106 - MPMX20_01250 0.58 -1.6
1,315,148 + MPMX20_01250 0.64 +0.1
1,315,188 - MPMX20_01250 0.69 -2.0
1,315,199 - MPMX20_01250 0.71 +0.7
1,315,204 - MPMX20_01250 0.71 -3.0
1,315,246 + MPMX20_01250 0.77 -0.3
1,315,249 - MPMX20_01250 0.77 -1.9
1,315,278 + MPMX20_01250 0.81 -0.1
1,315,278 + MPMX20_01250 0.81 +3.2
1,315,278 + MPMX20_01250 0.81 +2.4
1,315,278 + MPMX20_01250 0.81 +0.8
1,315,286 - MPMX20_01250 0.82 -0.1
1,315,286 - MPMX20_01250 0.82 +0.9
1,315,297 - MPMX20_01250 0.84 +2.0
1,315,344 - +1.8
1,315,344 - -0.8
1,315,380 + -2.7
1,315,408 - +1.1
1,315,465 + MPMX20_01251 0.11 +1.6
1,315,473 - MPMX20_01251 0.13 +2.2
1,315,486 + MPMX20_01251 0.16 +3.1
1,315,486 + MPMX20_01251 0.16 +0.3
1,315,556 + MPMX20_01251 0.33 +2.2
1,315,556 + MPMX20_01251 0.33 -1.6
1,315,556 + MPMX20_01251 0.33 -2.2
1,315,564 - MPMX20_01251 0.35 +0.7
1,315,564 - MPMX20_01251 0.35 +0.2
1,315,672 - MPMX20_01251 0.61 +1.1
1,315,703 + MPMX20_01251 0.68 +2.4
1,315,720 + MPMX20_01251 0.72 +1.4
1,315,750 + MPMX20_01251 0.80 +0.3
1,315,758 - MPMX20_01251 0.82 +0.5
1,315,764 + MPMX20_01251 0.83 +0.8
1,315,789 + MPMX20_01251 0.89 +2.5
1,315,794 + -0.7
1,315,797 - -1.0
1,315,833 + +2.1
1,315,841 - -0.6
1,315,842 + +0.2
1,315,843 + +2.4
1,315,851 - +0.1
1,315,851 - +0.6
1,315,851 - -1.2
1,315,867 - +1.3
1,315,872 + +3.5
1,315,886 - -3.2
1,315,886 - +0.5
1,315,918 - -1.0
1,315,949 + -1.9
1,315,979 + +0.3
1,315,979 + -1.4
1,315,979 + -0.2
1,315,979 + -3.2
1,315,979 + -0.0
1,315,979 + +2.2
1,315,979 + +2.2
1,315,979 + +1.9
1,315,979 + -0.1
1,315,979 + +0.5
1,315,987 - -2.1
1,315,987 - -1.5
1,315,987 - -2.6
1,315,987 - -3.8
1,315,987 - +2.1
1,315,987 - +1.9
1,315,987 - -1.5
1,315,987 - -2.6
1,316,014 + MPMX20_01252 0.12 -3.9
1,316,017 - MPMX20_01252 0.12 -1.2
1,316,164 + MPMX20_01252 0.25 +2.0
1,316,312 + MPMX20_01252 0.39 +0.5
1,316,312 + MPMX20_01252 0.39 +0.1
1,316,320 - MPMX20_01252 0.39 -2.4
1,316,320 - MPMX20_01252 0.39 +0.2
1,316,320 - MPMX20_01252 0.39 -1.4
1,316,385 + MPMX20_01252 0.45 +0.9
1,316,442 + MPMX20_01252 0.50 -2.2
1,316,484 - MPMX20_01252 0.54 -0.9
1,316,499 - MPMX20_01252 0.56 +1.4
1,316,541 - MPMX20_01252 0.59 -1.0
1,316,572 + MPMX20_01252 0.62 -1.2
1,316,610 + MPMX20_01252 0.65 -1.6
1,316,610 + MPMX20_01252 0.65 +2.7
1,316,617 + MPMX20_01252 0.66 +2.0
1,316,676 + MPMX20_01252 0.71 -0.1
1,316,676 + MPMX20_01252 0.71 -1.7
1,316,676 + MPMX20_01252 0.71 -2.5
1,316,676 + MPMX20_01252 0.71 -1.7
1,316,676 + MPMX20_01252 0.71 -1.3
1,316,690 + MPMX20_01252 0.73 -0.6
1,316,713 - MPMX20_01252 0.75 +2.3
1,316,786 + MPMX20_01252 0.81 +0.6
1,316,831 + MPMX20_01252 0.85 +1.9

Or see this region's nucleotide sequence