Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01248

Experiment: octanoate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01247 and MPMX20_01248 are separated by 9 nucleotidesMPMX20_01248 and MPMX20_01249 are separated by 10 nucleotidesMPMX20_01249 and MPMX20_01250 overlap by 1 nucleotides MPMX20_01247: MPMX20_01247 - Isochorismate synthase EntC, at 1,311,004 to 1,312,179 _01247 MPMX20_01248: MPMX20_01248 - Enterobactin synthase component E, at 1,312,189 to 1,313,799 _01248 MPMX20_01249: MPMX20_01249 - Enterobactin synthase component B, at 1,313,810 to 1,314,664 _01249 MPMX20_01250: MPMX20_01250 - 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase, at 1,314,664 to 1,315,419 _01250 Position (kb) 1312 1313 1314Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 1311.206 kb on + strand, within MPMX20_01247at 1311.225 kb on + strand, within MPMX20_01247at 1311.352 kb on - strand, within MPMX20_01247at 1311.438 kb on + strand, within MPMX20_01247at 1311.443 kb on + strand, within MPMX20_01247at 1311.621 kb on + strand, within MPMX20_01247at 1311.699 kb on + strand, within MPMX20_01247at 1311.732 kb on - strand, within MPMX20_01247at 1311.733 kb on - strand, within MPMX20_01247at 1311.773 kb on + strand, within MPMX20_01247at 1311.773 kb on + strand, within MPMX20_01247at 1311.773 kb on + strand, within MPMX20_01247at 1311.773 kb on + strand, within MPMX20_01247at 1311.781 kb on - strand, within MPMX20_01247at 1311.781 kb on - strand, within MPMX20_01247at 1311.805 kb on - strand, within MPMX20_01247at 1311.817 kb on + strand, within MPMX20_01247at 1311.823 kb on - strand, within MPMX20_01247at 1311.851 kb on - strand, within MPMX20_01247at 1312.044 kb on - strand, within MPMX20_01247at 1312.067 kb on - strandat 1312.067 kb on - strandat 1312.114 kb on - strandat 1312.136 kb on + strandat 1312.186 kb on + strandat 1312.194 kb on - strandat 1312.194 kb on - strandat 1312.194 kb on - strandat 1312.194 kb on - strandat 1312.194 kb on - strandat 1312.275 kb on + strandat 1312.279 kb on - strandat 1312.329 kb on + strandat 1312.346 kb on + strandat 1312.427 kb on - strand, within MPMX20_01248at 1312.474 kb on - strand, within MPMX20_01248at 1312.535 kb on - strand, within MPMX20_01248at 1312.542 kb on + strand, within MPMX20_01248at 1312.542 kb on + strand, within MPMX20_01248at 1312.542 kb on + strand, within MPMX20_01248at 1312.542 kb on + strand, within MPMX20_01248at 1312.547 kb on + strand, within MPMX20_01248at 1312.547 kb on + strand, within MPMX20_01248at 1312.550 kb on - strand, within MPMX20_01248at 1312.557 kb on + strand, within MPMX20_01248at 1312.565 kb on - strand, within MPMX20_01248at 1312.565 kb on - strand, within MPMX20_01248at 1312.565 kb on - strand, within MPMX20_01248at 1312.592 kb on - strand, within MPMX20_01248at 1312.592 kb on - strand, within MPMX20_01248at 1312.602 kb on + strand, within MPMX20_01248at 1312.610 kb on - strand, within MPMX20_01248at 1312.662 kb on + strand, within MPMX20_01248at 1312.685 kb on - strand, within MPMX20_01248at 1312.820 kb on - strand, within MPMX20_01248at 1312.859 kb on + strand, within MPMX20_01248at 1312.933 kb on + strand, within MPMX20_01248at 1312.933 kb on + strand, within MPMX20_01248at 1312.987 kb on - strand, within MPMX20_01248at 1313.012 kb on - strand, within MPMX20_01248at 1313.039 kb on + strand, within MPMX20_01248at 1313.039 kb on + strand, within MPMX20_01248at 1313.047 kb on - strand, within MPMX20_01248at 1313.065 kb on + strand, within MPMX20_01248at 1313.199 kb on - strand, within MPMX20_01248at 1313.213 kb on - strand, within MPMX20_01248at 1313.368 kb on + strand, within MPMX20_01248at 1313.386 kb on - strand, within MPMX20_01248at 1313.386 kb on - strand, within MPMX20_01248at 1313.399 kb on + strand, within MPMX20_01248at 1313.431 kb on - strand, within MPMX20_01248at 1313.434 kb on + strand, within MPMX20_01248at 1313.486 kb on - strand, within MPMX20_01248at 1313.569 kb on + strand, within MPMX20_01248at 1313.569 kb on + strand, within MPMX20_01248at 1313.569 kb on + strand, within MPMX20_01248at 1313.569 kb on + strand, within MPMX20_01248at 1313.577 kb on - strand, within MPMX20_01248at 1313.577 kb on - strand, within MPMX20_01248at 1313.577 kb on - strand, within MPMX20_01248at 1313.602 kb on + strand, within MPMX20_01248at 1313.632 kb on + strand, within MPMX20_01248at 1313.645 kb on + strandat 1313.674 kb on - strandat 1313.714 kb on + strandat 1313.722 kb on - strandat 1313.737 kb on - strandat 1313.756 kb on + strandat 1313.775 kb on - strandat 1313.801 kb on + strandat 1313.806 kb on + strandat 1313.806 kb on + strandat 1313.806 kb on + strandat 1313.806 kb on + strandat 1313.809 kb on - strandat 1313.832 kb on + strandat 1313.842 kb on + strandat 1313.866 kb on + strandat 1313.908 kb on + strand, within MPMX20_01249at 1314.015 kb on - strand, within MPMX20_01249at 1314.060 kb on + strand, within MPMX20_01249at 1314.060 kb on + strand, within MPMX20_01249at 1314.062 kb on + strand, within MPMX20_01249at 1314.101 kb on + strand, within MPMX20_01249at 1314.101 kb on + strand, within MPMX20_01249at 1314.101 kb on + strand, within MPMX20_01249at 1314.101 kb on + strand, within MPMX20_01249at 1314.114 kb on + strand, within MPMX20_01249at 1314.114 kb on + strand, within MPMX20_01249at 1314.280 kb on + strand, within MPMX20_01249at 1314.333 kb on - strand, within MPMX20_01249at 1314.423 kb on + strand, within MPMX20_01249at 1314.460 kb on + strand, within MPMX20_01249at 1314.530 kb on + strand, within MPMX20_01249at 1314.538 kb on - strand, within MPMX20_01249at 1314.578 kb on + strand, within MPMX20_01249at 1314.641 kb on - strandat 1314.693 kb on + strandat 1314.712 kb on + strandat 1314.718 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
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1,311,206 + MPMX20_01247 0.17 -2.9
1,311,225 + MPMX20_01247 0.19 +1.7
1,311,352 - MPMX20_01247 0.30 -1.0
1,311,438 + MPMX20_01247 0.37 +1.6
1,311,443 + MPMX20_01247 0.37 +1.1
1,311,621 + MPMX20_01247 0.52 -0.6
1,311,699 + MPMX20_01247 0.59 -2.1
1,311,732 - MPMX20_01247 0.62 -1.9
1,311,733 - MPMX20_01247 0.62 -0.6
1,311,773 + MPMX20_01247 0.65 -2.6
1,311,773 + MPMX20_01247 0.65 -3.1
1,311,773 + MPMX20_01247 0.65 -1.4
1,311,773 + MPMX20_01247 0.65 +1.9
1,311,781 - MPMX20_01247 0.66 -0.7
1,311,781 - MPMX20_01247 0.66 +1.9
1,311,805 - MPMX20_01247 0.68 -0.7
1,311,817 + MPMX20_01247 0.69 -0.3
1,311,823 - MPMX20_01247 0.70 -3.6
1,311,851 - MPMX20_01247 0.72 +1.4
1,312,044 - MPMX20_01247 0.88 -0.3
1,312,067 - +0.7
1,312,067 - -2.6
1,312,114 - -1.9
1,312,136 + -1.9
1,312,186 + -0.1
1,312,194 - -2.5
1,312,194 - -0.3
1,312,194 - +0.4
1,312,194 - -3.5
1,312,194 - +0.2
1,312,275 + +0.9
1,312,279 - +3.1
1,312,329 + -2.8
1,312,346 + +0.9
1,312,427 - MPMX20_01248 0.15 +1.4
1,312,474 - MPMX20_01248 0.18 +0.5
1,312,535 - MPMX20_01248 0.21 +1.5
1,312,542 + MPMX20_01248 0.22 -1.7
1,312,542 + MPMX20_01248 0.22 -2.4
1,312,542 + MPMX20_01248 0.22 -1.3
1,312,542 + MPMX20_01248 0.22 +1.9
1,312,547 + MPMX20_01248 0.22 +1.7
1,312,547 + MPMX20_01248 0.22 +1.4
1,312,550 - MPMX20_01248 0.22 -3.0
1,312,557 + MPMX20_01248 0.23 -3.1
1,312,565 - MPMX20_01248 0.23 +1.6
1,312,565 - MPMX20_01248 0.23 +0.4
1,312,565 - MPMX20_01248 0.23 -1.9
1,312,592 - MPMX20_01248 0.25 -3.3
1,312,592 - MPMX20_01248 0.25 +1.1
1,312,602 + MPMX20_01248 0.26 -1.2
1,312,610 - MPMX20_01248 0.26 -0.6
1,312,662 + MPMX20_01248 0.29 +1.1
1,312,685 - MPMX20_01248 0.31 +1.0
1,312,820 - MPMX20_01248 0.39 +2.4
1,312,859 + MPMX20_01248 0.42 -0.5
1,312,933 + MPMX20_01248 0.46 +2.7
1,312,933 + MPMX20_01248 0.46 -2.8
1,312,987 - MPMX20_01248 0.50 +1.4
1,313,012 - MPMX20_01248 0.51 +2.8
1,313,039 + MPMX20_01248 0.53 +2.5
1,313,039 + MPMX20_01248 0.53 +2.1
1,313,047 - MPMX20_01248 0.53 +2.9
1,313,065 + MPMX20_01248 0.54 -2.4
1,313,199 - MPMX20_01248 0.63 -2.5
1,313,213 - MPMX20_01248 0.64 -3.9
1,313,368 + MPMX20_01248 0.73 -2.9
1,313,386 - MPMX20_01248 0.74 -0.6
1,313,386 - MPMX20_01248 0.74 +2.9
1,313,399 + MPMX20_01248 0.75 +0.6
1,313,431 - MPMX20_01248 0.77 -2.5
1,313,434 + MPMX20_01248 0.77 +2.4
1,313,486 - MPMX20_01248 0.81 -1.4
1,313,569 + MPMX20_01248 0.86 +1.3
1,313,569 + MPMX20_01248 0.86 +2.4
1,313,569 + MPMX20_01248 0.86 -0.4
1,313,569 + MPMX20_01248 0.86 +3.3
1,313,577 - MPMX20_01248 0.86 -2.1
1,313,577 - MPMX20_01248 0.86 +1.5
1,313,577 - MPMX20_01248 0.86 +0.8
1,313,602 + MPMX20_01248 0.88 +3.3
1,313,632 + MPMX20_01248 0.90 -3.1
1,313,645 + +0.2
1,313,674 - +1.7
1,313,714 + +1.9
1,313,722 - +0.1
1,313,737 - -3.7
1,313,756 + +1.7
1,313,775 - -2.6
1,313,801 + +0.1
1,313,806 + -2.5
1,313,806 + -0.7
1,313,806 + -1.7
1,313,806 + -2.9
1,313,809 - -0.4
1,313,832 + -2.1
1,313,842 + +1.1
1,313,866 + -3.7
1,313,908 + MPMX20_01249 0.11 -2.6
1,314,015 - MPMX20_01249 0.24 +0.3
1,314,060 + MPMX20_01249 0.29 +1.9
1,314,060 + MPMX20_01249 0.29 +3.3
1,314,062 + MPMX20_01249 0.29 +2.1
1,314,101 + MPMX20_01249 0.34 -3.6
1,314,101 + MPMX20_01249 0.34 +1.0
1,314,101 + MPMX20_01249 0.34 +0.3
1,314,101 + MPMX20_01249 0.34 +1.0
1,314,114 + MPMX20_01249 0.36 +2.2
1,314,114 + MPMX20_01249 0.36 -1.4
1,314,280 + MPMX20_01249 0.55 -1.0
1,314,333 - MPMX20_01249 0.61 -3.3
1,314,423 + MPMX20_01249 0.72 +1.6
1,314,460 + MPMX20_01249 0.76 +1.1
1,314,530 + MPMX20_01249 0.84 +0.6
1,314,538 - MPMX20_01249 0.85 -2.6
1,314,578 + MPMX20_01249 0.90 +1.5
1,314,641 - +1.6
1,314,693 + -0.3
1,314,712 + -2.3
1,314,718 + +1.8

Or see this region's nucleotide sequence