Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01247 and MPMX20_01248 are separated by 9 nucleotides MPMX20_01248 and MPMX20_01249 are separated by 10 nucleotides MPMX20_01249 and MPMX20_01250 overlap by 1 nucleotides
MPMX20_01247: MPMX20_01247 - Isochorismate synthase EntC, at 1,311,004 to 1,312,179
_01247
MPMX20_01248: MPMX20_01248 - Enterobactin synthase component E, at 1,312,189 to 1,313,799
_01248
MPMX20_01249: MPMX20_01249 - Enterobactin synthase component B, at 1,313,810 to 1,314,664
_01249
MPMX20_01250: MPMX20_01250 - 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase, at 1,314,664 to 1,315,419
_01250
Position (kb)
1312
1313
1314 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 1311.206 kb on + strand, within MPMX20_01247 at 1311.225 kb on + strand, within MPMX20_01247 at 1311.352 kb on - strand, within MPMX20_01247 at 1311.438 kb on + strand, within MPMX20_01247 at 1311.443 kb on + strand, within MPMX20_01247 at 1311.621 kb on + strand, within MPMX20_01247 at 1311.699 kb on + strand, within MPMX20_01247 at 1311.732 kb on - strand, within MPMX20_01247 at 1311.733 kb on - strand, within MPMX20_01247 at 1311.773 kb on + strand, within MPMX20_01247 at 1311.773 kb on + strand, within MPMX20_01247 at 1311.773 kb on + strand, within MPMX20_01247 at 1311.773 kb on + strand, within MPMX20_01247 at 1311.781 kb on - strand, within MPMX20_01247 at 1311.781 kb on - strand, within MPMX20_01247 at 1311.805 kb on - strand, within MPMX20_01247 at 1311.817 kb on + strand, within MPMX20_01247 at 1311.823 kb on - strand, within MPMX20_01247 at 1311.851 kb on - strand, within MPMX20_01247 at 1312.044 kb on - strand, within MPMX20_01247 at 1312.067 kb on - strand at 1312.067 kb on - strand at 1312.114 kb on - strand at 1312.136 kb on + strand at 1312.186 kb on + strand at 1312.194 kb on - strand at 1312.194 kb on - strand at 1312.194 kb on - strand at 1312.194 kb on - strand at 1312.194 kb on - strand at 1312.275 kb on + strand at 1312.279 kb on - strand at 1312.329 kb on + strand at 1312.346 kb on + strand at 1312.427 kb on - strand, within MPMX20_01248 at 1312.474 kb on - strand, within MPMX20_01248 at 1312.535 kb on - strand, within MPMX20_01248 at 1312.542 kb on + strand, within MPMX20_01248 at 1312.542 kb on + strand, within MPMX20_01248 at 1312.542 kb on + strand, within MPMX20_01248 at 1312.542 kb on + strand, within MPMX20_01248 at 1312.547 kb on + strand, within MPMX20_01248 at 1312.547 kb on + strand, within MPMX20_01248 at 1312.550 kb on - strand, within MPMX20_01248 at 1312.557 kb on + strand, within MPMX20_01248 at 1312.565 kb on - strand, within MPMX20_01248 at 1312.565 kb on - strand, within MPMX20_01248 at 1312.565 kb on - strand, within MPMX20_01248 at 1312.592 kb on - strand, within MPMX20_01248 at 1312.592 kb on - strand, within MPMX20_01248 at 1312.602 kb on + strand, within MPMX20_01248 at 1312.610 kb on - strand, within MPMX20_01248 at 1312.662 kb on + strand, within MPMX20_01248 at 1312.685 kb on - strand, within MPMX20_01248 at 1312.820 kb on - strand, within MPMX20_01248 at 1312.859 kb on + strand, within MPMX20_01248 at 1312.933 kb on + strand, within MPMX20_01248 at 1312.933 kb on + strand, within MPMX20_01248 at 1312.987 kb on - strand, within MPMX20_01248 at 1313.012 kb on - strand, within MPMX20_01248 at 1313.039 kb on + strand, within MPMX20_01248 at 1313.039 kb on + strand, within MPMX20_01248 at 1313.047 kb on - strand, within MPMX20_01248 at 1313.065 kb on + strand, within MPMX20_01248 at 1313.199 kb on - strand, within MPMX20_01248 at 1313.213 kb on - strand, within MPMX20_01248 at 1313.368 kb on + strand, within MPMX20_01248 at 1313.386 kb on - strand, within MPMX20_01248 at 1313.386 kb on - strand, within MPMX20_01248 at 1313.399 kb on + strand, within MPMX20_01248 at 1313.431 kb on - strand, within MPMX20_01248 at 1313.434 kb on + strand, within MPMX20_01248 at 1313.486 kb on - strand, within MPMX20_01248 at 1313.569 kb on + strand, within MPMX20_01248 at 1313.569 kb on + strand, within MPMX20_01248 at 1313.569 kb on + strand, within MPMX20_01248 at 1313.569 kb on + strand, within MPMX20_01248 at 1313.577 kb on - strand, within MPMX20_01248 at 1313.577 kb on - strand, within MPMX20_01248 at 1313.577 kb on - strand, within MPMX20_01248 at 1313.602 kb on + strand, within MPMX20_01248 at 1313.632 kb on + strand, within MPMX20_01248 at 1313.645 kb on + strand at 1313.674 kb on - strand at 1313.714 kb on + strand at 1313.722 kb on - strand at 1313.737 kb on - strand at 1313.756 kb on + strand at 1313.775 kb on - strand at 1313.801 kb on + strand at 1313.806 kb on + strand at 1313.806 kb on + strand at 1313.806 kb on + strand at 1313.806 kb on + strand at 1313.809 kb on - strand at 1313.832 kb on + strand at 1313.842 kb on + strand at 1313.866 kb on + strand at 1313.908 kb on + strand, within MPMX20_01249 at 1314.015 kb on - strand, within MPMX20_01249 at 1314.060 kb on + strand, within MPMX20_01249 at 1314.060 kb on + strand, within MPMX20_01249 at 1314.062 kb on + strand, within MPMX20_01249 at 1314.101 kb on + strand, within MPMX20_01249 at 1314.101 kb on + strand, within MPMX20_01249 at 1314.101 kb on + strand, within MPMX20_01249 at 1314.101 kb on + strand, within MPMX20_01249 at 1314.114 kb on + strand, within MPMX20_01249 at 1314.114 kb on + strand, within MPMX20_01249 at 1314.280 kb on + strand, within MPMX20_01249 at 1314.333 kb on - strand, within MPMX20_01249 at 1314.423 kb on + strand, within MPMX20_01249 at 1314.460 kb on + strand, within MPMX20_01249 at 1314.530 kb on + strand, within MPMX20_01249 at 1314.538 kb on - strand, within MPMX20_01249 at 1314.578 kb on + strand, within MPMX20_01249 at 1314.641 kb on - strand at 1314.693 kb on + strand at 1314.712 kb on + strand at 1314.718 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 1,311,206 + MPMX20_01247 0.17 -2.9 1,311,225 + MPMX20_01247 0.19 +1.7 1,311,352 - MPMX20_01247 0.30 -1.0 1,311,438 + MPMX20_01247 0.37 +1.6 1,311,443 + MPMX20_01247 0.37 +1.1 1,311,621 + MPMX20_01247 0.52 -0.6 1,311,699 + MPMX20_01247 0.59 -2.1 1,311,732 - MPMX20_01247 0.62 -1.9 1,311,733 - MPMX20_01247 0.62 -0.6 1,311,773 + MPMX20_01247 0.65 -2.6 1,311,773 + MPMX20_01247 0.65 -3.1 1,311,773 + MPMX20_01247 0.65 -1.4 1,311,773 + MPMX20_01247 0.65 +1.9 1,311,781 - MPMX20_01247 0.66 -0.7 1,311,781 - MPMX20_01247 0.66 +1.9 1,311,805 - MPMX20_01247 0.68 -0.7 1,311,817 + MPMX20_01247 0.69 -0.3 1,311,823 - MPMX20_01247 0.70 -3.6 1,311,851 - MPMX20_01247 0.72 +1.4 1,312,044 - MPMX20_01247 0.88 -0.3 1,312,067 - +0.7 1,312,067 - -2.6 1,312,114 - -1.9 1,312,136 + -1.9 1,312,186 + -0.1 1,312,194 - -2.5 1,312,194 - -0.3 1,312,194 - +0.4 1,312,194 - -3.5 1,312,194 - +0.2 1,312,275 + +0.9 1,312,279 - +3.1 1,312,329 + -2.8 1,312,346 + +0.9 1,312,427 - MPMX20_01248 0.15 +1.4 1,312,474 - MPMX20_01248 0.18 +0.5 1,312,535 - MPMX20_01248 0.21 +1.5 1,312,542 + MPMX20_01248 0.22 -1.7 1,312,542 + MPMX20_01248 0.22 -2.4 1,312,542 + MPMX20_01248 0.22 -1.3 1,312,542 + MPMX20_01248 0.22 +1.9 1,312,547 + MPMX20_01248 0.22 +1.7 1,312,547 + MPMX20_01248 0.22 +1.4 1,312,550 - MPMX20_01248 0.22 -3.0 1,312,557 + MPMX20_01248 0.23 -3.1 1,312,565 - MPMX20_01248 0.23 +1.6 1,312,565 - MPMX20_01248 0.23 +0.4 1,312,565 - MPMX20_01248 0.23 -1.9 1,312,592 - MPMX20_01248 0.25 -3.3 1,312,592 - MPMX20_01248 0.25 +1.1 1,312,602 + MPMX20_01248 0.26 -1.2 1,312,610 - MPMX20_01248 0.26 -0.6 1,312,662 + MPMX20_01248 0.29 +1.1 1,312,685 - MPMX20_01248 0.31 +1.0 1,312,820 - MPMX20_01248 0.39 +2.4 1,312,859 + MPMX20_01248 0.42 -0.5 1,312,933 + MPMX20_01248 0.46 +2.7 1,312,933 + MPMX20_01248 0.46 -2.8 1,312,987 - MPMX20_01248 0.50 +1.4 1,313,012 - MPMX20_01248 0.51 +2.8 1,313,039 + MPMX20_01248 0.53 +2.5 1,313,039 + MPMX20_01248 0.53 +2.1 1,313,047 - MPMX20_01248 0.53 +2.9 1,313,065 + MPMX20_01248 0.54 -2.4 1,313,199 - MPMX20_01248 0.63 -2.5 1,313,213 - MPMX20_01248 0.64 -3.9 1,313,368 + MPMX20_01248 0.73 -2.9 1,313,386 - MPMX20_01248 0.74 -0.6 1,313,386 - MPMX20_01248 0.74 +2.9 1,313,399 + MPMX20_01248 0.75 +0.6 1,313,431 - MPMX20_01248 0.77 -2.5 1,313,434 + MPMX20_01248 0.77 +2.4 1,313,486 - MPMX20_01248 0.81 -1.4 1,313,569 + MPMX20_01248 0.86 +1.3 1,313,569 + MPMX20_01248 0.86 +2.4 1,313,569 + MPMX20_01248 0.86 -0.4 1,313,569 + MPMX20_01248 0.86 +3.3 1,313,577 - MPMX20_01248 0.86 -2.1 1,313,577 - MPMX20_01248 0.86 +1.5 1,313,577 - MPMX20_01248 0.86 +0.8 1,313,602 + MPMX20_01248 0.88 +3.3 1,313,632 + MPMX20_01248 0.90 -3.1 1,313,645 + +0.2 1,313,674 - +1.7 1,313,714 + +1.9 1,313,722 - +0.1 1,313,737 - -3.7 1,313,756 + +1.7 1,313,775 - -2.6 1,313,801 + +0.1 1,313,806 + -2.5 1,313,806 + -0.7 1,313,806 + -1.7 1,313,806 + -2.9 1,313,809 - -0.4 1,313,832 + -2.1 1,313,842 + +1.1 1,313,866 + -3.7 1,313,908 + MPMX20_01249 0.11 -2.6 1,314,015 - MPMX20_01249 0.24 +0.3 1,314,060 + MPMX20_01249 0.29 +1.9 1,314,060 + MPMX20_01249 0.29 +3.3 1,314,062 + MPMX20_01249 0.29 +2.1 1,314,101 + MPMX20_01249 0.34 -3.6 1,314,101 + MPMX20_01249 0.34 +1.0 1,314,101 + MPMX20_01249 0.34 +0.3 1,314,101 + MPMX20_01249 0.34 +1.0 1,314,114 + MPMX20_01249 0.36 +2.2 1,314,114 + MPMX20_01249 0.36 -1.4 1,314,280 + MPMX20_01249 0.55 -1.0 1,314,333 - MPMX20_01249 0.61 -3.3 1,314,423 + MPMX20_01249 0.72 +1.6 1,314,460 + MPMX20_01249 0.76 +1.1 1,314,530 + MPMX20_01249 0.84 +0.6 1,314,538 - MPMX20_01249 0.85 -2.6 1,314,578 + MPMX20_01249 0.90 +1.5 1,314,641 - +1.6 1,314,693 + -0.3 1,314,712 + -2.3 1,314,718 + +1.8
Or see this region's nucleotide sequence