Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01095 and MPMX20_01096 are separated by 71 nucleotides MPMX20_01096 and MPMX20_01097 are separated by 84 nucleotides
MPMX20_01095: MPMX20_01095 - hypothetical protein, at 1,155,338 to 1,156,483
_01095
MPMX20_01096: MPMX20_01096 - tRNA 2-selenouridine synthase, at 1,156,555 to 1,157,625
_01096
MPMX20_01097: MPMX20_01097 - N5-carboxyaminoimidazole ribonucleotide synthase, at 1,157,710 to 1,158,777
_01097
Position (kb)
1156
1157
1158 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 1155.629 kb on - strand, within MPMX20_01095 at 1155.629 kb on - strand, within MPMX20_01095 at 1155.648 kb on - strand, within MPMX20_01095 at 1155.650 kb on - strand, within MPMX20_01095 at 1155.650 kb on - strand, within MPMX20_01095 at 1155.678 kb on - strand, within MPMX20_01095 at 1155.706 kb on + strand, within MPMX20_01095 at 1155.706 kb on + strand, within MPMX20_01095 at 1155.707 kb on - strand, within MPMX20_01095 at 1155.714 kb on - strand, within MPMX20_01095 at 1155.714 kb on - strand, within MPMX20_01095 at 1155.714 kb on - strand, within MPMX20_01095 at 1155.724 kb on - strand, within MPMX20_01095 at 1155.738 kb on - strand, within MPMX20_01095 at 1155.738 kb on - strand, within MPMX20_01095 at 1155.743 kb on - strand, within MPMX20_01095 at 1155.744 kb on - strand, within MPMX20_01095 at 1155.755 kb on + strand, within MPMX20_01095 at 1155.760 kb on + strand, within MPMX20_01095 at 1155.768 kb on - strand, within MPMX20_01095 at 1155.784 kb on - strand, within MPMX20_01095 at 1155.827 kb on + strand, within MPMX20_01095 at 1155.834 kb on - strand, within MPMX20_01095 at 1155.834 kb on - strand, within MPMX20_01095 at 1155.834 kb on - strand, within MPMX20_01095 at 1155.841 kb on + strand, within MPMX20_01095 at 1155.851 kb on + strand, within MPMX20_01095 at 1155.953 kb on - strand, within MPMX20_01095 at 1156.015 kb on + strand, within MPMX20_01095 at 1156.030 kb on + strand, within MPMX20_01095 at 1156.048 kb on + strand, within MPMX20_01095 at 1156.051 kb on - strand, within MPMX20_01095 at 1156.057 kb on - strand, within MPMX20_01095 at 1156.137 kb on - strand, within MPMX20_01095 at 1156.137 kb on - strand, within MPMX20_01095 at 1156.137 kb on - strand, within MPMX20_01095 at 1156.144 kb on + strand, within MPMX20_01095 at 1156.249 kb on - strand, within MPMX20_01095 at 1156.285 kb on + strand, within MPMX20_01095 at 1156.290 kb on + strand, within MPMX20_01095 at 1156.306 kb on + strand, within MPMX20_01095 at 1156.314 kb on - strand, within MPMX20_01095 at 1156.314 kb on - strand, within MPMX20_01095 at 1156.385 kb on - strand at 1156.477 kb on + strand at 1156.499 kb on + strand at 1156.501 kb on - strand at 1156.524 kb on + strand at 1156.626 kb on + strand at 1156.634 kb on + strand at 1156.642 kb on - strand at 1156.668 kb on + strand, within MPMX20_01096 at 1156.676 kb on - strand, within MPMX20_01096 at 1156.724 kb on + strand, within MPMX20_01096 at 1156.732 kb on - strand, within MPMX20_01096 at 1156.757 kb on - strand, within MPMX20_01096 at 1156.772 kb on - strand, within MPMX20_01096 at 1156.803 kb on + strand, within MPMX20_01096 at 1156.811 kb on - strand, within MPMX20_01096 at 1156.982 kb on - strand, within MPMX20_01096 at 1157.084 kb on - strand, within MPMX20_01096 at 1157.103 kb on - strand, within MPMX20_01096 at 1157.141 kb on + strand, within MPMX20_01096 at 1157.141 kb on + strand, within MPMX20_01096 at 1157.232 kb on + strand, within MPMX20_01096 at 1157.353 kb on - strand, within MPMX20_01096 at 1157.390 kb on + strand, within MPMX20_01096 at 1157.390 kb on + strand, within MPMX20_01096 at 1157.416 kb on - strand, within MPMX20_01096 at 1157.427 kb on + strand, within MPMX20_01096 at 1157.509 kb on - strand, within MPMX20_01096 at 1157.581 kb on + strand at 1157.686 kb on + strand at 1157.686 kb on + strand at 1157.687 kb on - strand at 1157.694 kb on - strand at 1157.700 kb on - strand at 1157.843 kb on - strand, within MPMX20_01097 at 1157.889 kb on + strand, within MPMX20_01097 at 1157.997 kb on + strand, within MPMX20_01097 at 1158.051 kb on - strand, within MPMX20_01097 at 1158.057 kb on + strand, within MPMX20_01097 at 1158.057 kb on + strand, within MPMX20_01097 at 1158.144 kb on - strand, within MPMX20_01097 at 1158.174 kb on + strand, within MPMX20_01097 at 1158.179 kb on + strand, within MPMX20_01097 at 1158.179 kb on + strand, within MPMX20_01097 at 1158.187 kb on - strand, within MPMX20_01097 at 1158.239 kb on - strand, within MPMX20_01097 at 1158.263 kb on - strand, within MPMX20_01097 at 1158.270 kb on - strand, within MPMX20_01097 at 1158.299 kb on + strand, within MPMX20_01097 at 1158.318 kb on + strand, within MPMX20_01097 at 1158.326 kb on - strand, within MPMX20_01097 at 1158.326 kb on - strand, within MPMX20_01097 at 1158.387 kb on + strand, within MPMX20_01097 at 1158.387 kb on + strand, within MPMX20_01097 at 1158.387 kb on + strand, within MPMX20_01097 at 1158.395 kb on - strand, within MPMX20_01097 at 1158.395 kb on - strand, within MPMX20_01097 at 1158.609 kb on - strand, within MPMX20_01097
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 1,155,629 - MPMX20_01095 0.25 +1.2 1,155,629 - MPMX20_01095 0.25 +2.2 1,155,648 - MPMX20_01095 0.27 -1.6 1,155,650 - MPMX20_01095 0.27 -1.1 1,155,650 - MPMX20_01095 0.27 -0.9 1,155,678 - MPMX20_01095 0.30 +0.9 1,155,706 + MPMX20_01095 0.32 +3.4 1,155,706 + MPMX20_01095 0.32 +0.3 1,155,707 - MPMX20_01095 0.32 +1.2 1,155,714 - MPMX20_01095 0.33 +0.2 1,155,714 - MPMX20_01095 0.33 +0.3 1,155,714 - MPMX20_01095 0.33 +0.2 1,155,724 - MPMX20_01095 0.34 -2.9 1,155,738 - MPMX20_01095 0.35 -2.9 1,155,738 - MPMX20_01095 0.35 +2.1 1,155,743 - MPMX20_01095 0.35 +0.2 1,155,744 - MPMX20_01095 0.35 +2.0 1,155,755 + MPMX20_01095 0.36 -3.1 1,155,760 + MPMX20_01095 0.37 -3.5 1,155,768 - MPMX20_01095 0.38 +1.7 1,155,784 - MPMX20_01095 0.39 -1.1 1,155,827 + MPMX20_01095 0.43 -0.6 1,155,834 - MPMX20_01095 0.43 -0.1 1,155,834 - MPMX20_01095 0.43 -2.9 1,155,834 - MPMX20_01095 0.43 +1.1 1,155,841 + MPMX20_01095 0.44 +1.5 1,155,851 + MPMX20_01095 0.45 -1.6 1,155,953 - MPMX20_01095 0.54 -1.4 1,156,015 + MPMX20_01095 0.59 +2.4 1,156,030 + MPMX20_01095 0.60 -2.5 1,156,048 + MPMX20_01095 0.62 +1.2 1,156,051 - MPMX20_01095 0.62 -0.3 1,156,057 - MPMX20_01095 0.63 +2.4 1,156,137 - MPMX20_01095 0.70 -2.6 1,156,137 - MPMX20_01095 0.70 +0.6 1,156,137 - MPMX20_01095 0.70 +2.0 1,156,144 + MPMX20_01095 0.70 +1.2 1,156,249 - MPMX20_01095 0.79 -0.3 1,156,285 + MPMX20_01095 0.83 -0.8 1,156,290 + MPMX20_01095 0.83 +2.2 1,156,306 + MPMX20_01095 0.84 +0.5 1,156,314 - MPMX20_01095 0.85 -0.9 1,156,314 - MPMX20_01095 0.85 +1.3 1,156,385 - +0.8 1,156,477 + +2.1 1,156,499 + +0.5 1,156,501 - +2.0 1,156,524 + -2.4 1,156,626 + +0.0 1,156,634 + +0.5 1,156,642 - +1.1 1,156,668 + MPMX20_01096 0.11 +0.5 1,156,676 - MPMX20_01096 0.11 -2.1 1,156,724 + MPMX20_01096 0.16 -2.5 1,156,732 - MPMX20_01096 0.17 +1.7 1,156,757 - MPMX20_01096 0.19 +1.6 1,156,772 - MPMX20_01096 0.20 +0.5 1,156,803 + MPMX20_01096 0.23 -1.3 1,156,811 - MPMX20_01096 0.24 -3.2 1,156,982 - MPMX20_01096 0.40 -0.2 1,157,084 - MPMX20_01096 0.49 +2.2 1,157,103 - MPMX20_01096 0.51 +1.5 1,157,141 + MPMX20_01096 0.55 +1.1 1,157,141 + MPMX20_01096 0.55 +3.0 1,157,232 + MPMX20_01096 0.63 +0.9 1,157,353 - MPMX20_01096 0.75 +2.1 1,157,390 + MPMX20_01096 0.78 +0.5 1,157,390 + MPMX20_01096 0.78 +1.2 1,157,416 - MPMX20_01096 0.80 -0.2 1,157,427 + MPMX20_01096 0.81 +1.9 1,157,509 - MPMX20_01096 0.89 -2.7 1,157,581 + -1.2 1,157,686 + -0.9 1,157,686 + -0.5 1,157,687 - -2.2 1,157,694 - +0.2 1,157,700 - -2.8 1,157,843 - MPMX20_01097 0.12 +1.6 1,157,889 + MPMX20_01097 0.17 -2.0 1,157,997 + MPMX20_01097 0.27 +0.8 1,158,051 - MPMX20_01097 0.32 +3.5 1,158,057 + MPMX20_01097 0.32 -2.9 1,158,057 + MPMX20_01097 0.32 +2.0 1,158,144 - MPMX20_01097 0.41 -1.5 1,158,174 + MPMX20_01097 0.43 +1.6 1,158,179 + MPMX20_01097 0.44 -0.8 1,158,179 + MPMX20_01097 0.44 +0.9 1,158,187 - MPMX20_01097 0.45 -2.7 1,158,239 - MPMX20_01097 0.50 -1.8 1,158,263 - MPMX20_01097 0.52 -3.5 1,158,270 - MPMX20_01097 0.52 +2.6 1,158,299 + MPMX20_01097 0.55 -2.9 1,158,318 + MPMX20_01097 0.57 +2.0 1,158,326 - MPMX20_01097 0.58 -1.6 1,158,326 - MPMX20_01097 0.58 -2.2 1,158,387 + MPMX20_01097 0.63 -0.6 1,158,387 + MPMX20_01097 0.63 -1.9 1,158,387 + MPMX20_01097 0.63 -0.3 1,158,395 - MPMX20_01097 0.64 +4.0 1,158,395 - MPMX20_01097 0.64 -0.9 1,158,609 - MPMX20_01097 0.84 -2.0
Or see this region's nucleotide sequence