Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00823

Experiment: octanoate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00821 and MPMX20_00822 overlap by 4 nucleotidesMPMX20_00822 and MPMX20_00823 are separated by 105 nucleotidesMPMX20_00823 and MPMX20_00824 are separated by 63 nucleotides MPMX20_00821: MPMX20_00821 - putative ABC transporter ATP-binding protein YadG, at 864,459 to 865,385 _00821 MPMX20_00822: MPMX20_00822 - Inner membrane transport permease YadH, at 865,382 to 866,152 _00822 MPMX20_00823: MPMX20_00823 - hypothetical protein, at 866,258 to 866,698 _00823 MPMX20_00824: MPMX20_00824 - hypothetical protein, at 866,762 to 868,009 _00824 Position (kb) 866 867Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 865.280 kb on + strand, within MPMX20_00821at 865.288 kb on - strand, within MPMX20_00821at 865.302 kb on - strandat 865.348 kb on + strandat 865.379 kb on + strandat 865.429 kb on + strandat 865.461 kb on + strand, within MPMX20_00822at 865.461 kb on + strand, within MPMX20_00822at 865.513 kb on + strand, within MPMX20_00822at 865.545 kb on + strand, within MPMX20_00822at 865.553 kb on - strand, within MPMX20_00822at 865.553 kb on - strand, within MPMX20_00822at 865.587 kb on - strand, within MPMX20_00822at 865.600 kb on - strand, within MPMX20_00822at 865.653 kb on + strand, within MPMX20_00822at 865.661 kb on - strand, within MPMX20_00822at 865.671 kb on - strand, within MPMX20_00822at 865.799 kb on - strand, within MPMX20_00822at 865.855 kb on + strand, within MPMX20_00822at 865.887 kb on + strand, within MPMX20_00822at 865.887 kb on + strand, within MPMX20_00822at 865.927 kb on - strand, within MPMX20_00822at 865.927 kb on - strand, within MPMX20_00822at 865.940 kb on + strand, within MPMX20_00822at 865.947 kb on + strand, within MPMX20_00822at 865.950 kb on + strand, within MPMX20_00822at 865.950 kb on - strand, within MPMX20_00822at 865.958 kb on - strand, within MPMX20_00822at 865.969 kb on + strand, within MPMX20_00822at 866.054 kb on + strand, within MPMX20_00822at 866.136 kb on - strandat 866.148 kb on + strandat 866.243 kb on + strandat 866.248 kb on + strandat 866.256 kb on - strandat 866.307 kb on - strand, within MPMX20_00823at 866.333 kb on - strand, within MPMX20_00823at 866.339 kb on + strand, within MPMX20_00823at 866.362 kb on - strand, within MPMX20_00823at 866.403 kb on + strand, within MPMX20_00823at 866.411 kb on - strand, within MPMX20_00823at 866.520 kb on - strand, within MPMX20_00823at 866.530 kb on + strand, within MPMX20_00823at 866.562 kb on - strand, within MPMX20_00823at 866.573 kb on + strand, within MPMX20_00823at 866.573 kb on + strand, within MPMX20_00823at 866.573 kb on + strand, within MPMX20_00823at 866.574 kb on + strand, within MPMX20_00823at 866.581 kb on - strand, within MPMX20_00823at 866.581 kb on - strand, within MPMX20_00823at 866.581 kb on - strand, within MPMX20_00823at 866.581 kb on - strand, within MPMX20_00823at 866.624 kb on + strand, within MPMX20_00823at 866.839 kb on - strandat 866.863 kb on - strandat 866.928 kb on - strand, within MPMX20_00824at 867.091 kb on - strand, within MPMX20_00824at 867.157 kb on + strand, within MPMX20_00824at 867.162 kb on + strand, within MPMX20_00824at 867.170 kb on - strand, within MPMX20_00824at 867.177 kb on + strand, within MPMX20_00824at 867.216 kb on - strand, within MPMX20_00824at 867.261 kb on + strand, within MPMX20_00824at 867.269 kb on - strand, within MPMX20_00824at 867.325 kb on + strand, within MPMX20_00824at 867.383 kb on + strand, within MPMX20_00824at 867.406 kb on + strand, within MPMX20_00824at 867.406 kb on + strand, within MPMX20_00824at 867.406 kb on + strand, within MPMX20_00824at 867.406 kb on + strand, within MPMX20_00824at 867.406 kb on + strand, within MPMX20_00824at 867.406 kb on + strand, within MPMX20_00824at 867.406 kb on + strand, within MPMX20_00824at 867.406 kb on + strand, within MPMX20_00824at 867.406 kb on + strand, within MPMX20_00824at 867.406 kb on + strand, within MPMX20_00824at 867.414 kb on - strand, within MPMX20_00824at 867.414 kb on - strand, within MPMX20_00824at 867.414 kb on - strand, within MPMX20_00824at 867.414 kb on - strand, within MPMX20_00824at 867.414 kb on - strand, within MPMX20_00824at 867.421 kb on + strand, within MPMX20_00824at 867.434 kb on + strand, within MPMX20_00824at 867.441 kb on - strand, within MPMX20_00824at 867.489 kb on + strand, within MPMX20_00824at 867.625 kb on + strand, within MPMX20_00824at 867.625 kb on + strand, within MPMX20_00824at 867.652 kb on + strand, within MPMX20_00824at 867.660 kb on - strand, within MPMX20_00824at 867.660 kb on - strand, within MPMX20_00824

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Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
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865,280 + MPMX20_00821 0.89 -3.0
865,288 - MPMX20_00821 0.89 +3.9
865,302 - -1.9
865,348 + +1.4
865,379 + +1.3
865,429 + -2.5
865,461 + MPMX20_00822 0.10 +0.2
865,461 + MPMX20_00822 0.10 +1.8
865,513 + MPMX20_00822 0.17 +2.8
865,545 + MPMX20_00822 0.21 -1.6
865,553 - MPMX20_00822 0.22 +1.4
865,553 - MPMX20_00822 0.22 +2.1
865,587 - MPMX20_00822 0.27 -3.1
865,600 - MPMX20_00822 0.28 +1.4
865,653 + MPMX20_00822 0.35 -2.1
865,661 - MPMX20_00822 0.36 +2.4
865,671 - MPMX20_00822 0.37 +0.8
865,799 - MPMX20_00822 0.54 +0.6
865,855 + MPMX20_00822 0.61 +2.7
865,887 + MPMX20_00822 0.65 +2.9
865,887 + MPMX20_00822 0.65 -0.5
865,927 - MPMX20_00822 0.71 +0.5
865,927 - MPMX20_00822 0.71 -3.2
865,940 + MPMX20_00822 0.72 -1.7
865,947 + MPMX20_00822 0.73 +0.4
865,950 + MPMX20_00822 0.74 -1.5
865,950 - MPMX20_00822 0.74 +0.9
865,958 - MPMX20_00822 0.75 +1.0
865,969 + MPMX20_00822 0.76 -0.9
866,054 + MPMX20_00822 0.87 +0.0
866,136 - -3.5
866,148 + +0.9
866,243 + +1.2
866,248 + +1.5
866,256 - -0.1
866,307 - MPMX20_00823 0.11 +2.5
866,333 - MPMX20_00823 0.17 +2.8
866,339 + MPMX20_00823 0.18 -1.6
866,362 - MPMX20_00823 0.24 -3.2
866,403 + MPMX20_00823 0.33 +0.8
866,411 - MPMX20_00823 0.35 -2.8
866,520 - MPMX20_00823 0.59 -1.6
866,530 + MPMX20_00823 0.62 +0.0
866,562 - MPMX20_00823 0.69 -2.0
866,573 + MPMX20_00823 0.71 +0.0
866,573 + MPMX20_00823 0.71 +0.2
866,573 + MPMX20_00823 0.71 +1.9
866,574 + MPMX20_00823 0.72 -3.0
866,581 - MPMX20_00823 0.73 +2.8
866,581 - MPMX20_00823 0.73 -0.3
866,581 - MPMX20_00823 0.73 +0.7
866,581 - MPMX20_00823 0.73 +2.8
866,624 + MPMX20_00823 0.83 -2.7
866,839 - +1.3
866,863 - +1.7
866,928 - MPMX20_00824 0.13 +0.8
867,091 - MPMX20_00824 0.26 -0.5
867,157 + MPMX20_00824 0.32 +2.5
867,162 + MPMX20_00824 0.32 +2.0
867,170 - MPMX20_00824 0.33 -0.5
867,177 + MPMX20_00824 0.33 -3.9
867,216 - MPMX20_00824 0.36 +4.6
867,261 + MPMX20_00824 0.40 +1.4
867,269 - MPMX20_00824 0.41 +0.8
867,325 + MPMX20_00824 0.45 -2.4
867,383 + MPMX20_00824 0.50 +0.5
867,406 + MPMX20_00824 0.52 +0.7
867,406 + MPMX20_00824 0.52 +2.5
867,406 + MPMX20_00824 0.52 -2.2
867,406 + MPMX20_00824 0.52 -1.3
867,406 + MPMX20_00824 0.52 +0.9
867,406 + MPMX20_00824 0.52 +1.8
867,406 + MPMX20_00824 0.52 +1.2
867,406 + MPMX20_00824 0.52 -2.6
867,406 + MPMX20_00824 0.52 -2.4
867,406 + MPMX20_00824 0.52 -2.2
867,414 - MPMX20_00824 0.52 -1.2
867,414 - MPMX20_00824 0.52 +1.2
867,414 - MPMX20_00824 0.52 +1.4
867,414 - MPMX20_00824 0.52 +0.5
867,414 - MPMX20_00824 0.52 -1.1
867,421 + MPMX20_00824 0.53 -1.1
867,434 + MPMX20_00824 0.54 +2.3
867,441 - MPMX20_00824 0.54 +2.0
867,489 + MPMX20_00824 0.58 +0.6
867,625 + MPMX20_00824 0.69 -3.2
867,625 + MPMX20_00824 0.69 -1.6
867,652 + MPMX20_00824 0.71 +1.3
867,660 - MPMX20_00824 0.72 +1.5
867,660 - MPMX20_00824 0.72 +3.8

Or see this region's nucleotide sequence